RNA–Protein interactions for RNA: ENST00000443722.5

PMPCB-203, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-203ENST00000443722 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
PMPCB-203ENST00000443722 RUSC2Q8N2Y8 1516 aa22.76■■□□□ 1.23
PMPCB-203ENST00000443722 CUL7Q14999 1698 aa22.73■■□□□ 1.23
PMPCB-203ENST00000443722 KIAA0586Q9BVV6 1533 aa22.7■■□□□ 1.22
PMPCB-203ENST00000443722 TTBK1Q5TCY1 1321 aaPredicted RBP22.62■■□□□ 1.21
PMPCB-203ENST00000443722 RAPGEF2Q9Y4G8 1499 aa22.55■■□□□ 1.2
PMPCB-203ENST00000443722 IQGAP2Q13576 1575 aa22.5■■□□□ 1.19
PMPCB-203ENST00000443722 PTPRGP23470 1445 aa22.48■■□□□ 1.19
PMPCB-203ENST00000443722 NPM1P06748 294 aaKnown RBP eCLIP22.48■■□□□ 1.19
PMPCB-203ENST00000443722 ADCY10Q96PN6 1610 aa22.46■■□□□ 1.19
PMPCB-203ENST00000443722 CARMIL2Q6F5E8 1435 aa22.45■■□□□ 1.19
PMPCB-203ENST00000443722 TNIKQ9UKE5 1360 aa22.43■■□□□ 1.18
PMPCB-203ENST00000443722 DISP1Q96F81 1524 aa22.42■■□□□ 1.18
PMPCB-203ENST00000443722 FAM69CQ0P6D2 419 aa22.39■■□□□ 1.18
PMPCB-203ENST00000443722 PRXQ9BXM0 1461 aa22.39■■□□□ 1.18
PMPCB-203ENST00000443722 UGGT2Q9NYU1 1516 aa22.37■■□□□ 1.17
PMPCB-203ENST00000443722 FAM9AQ8IZU1 332 aaPredicted RBP22.34■■□□□ 1.17
PMPCB-203ENST00000443722 CSRNP3Q8WYN3 585 aa22.33■■□□□ 1.17
PMPCB-203ENST00000443722 ABCC10Q5T3U5 1492 aa22.33■■□□□ 1.17
PMPCB-203ENST00000443722 MAPKBP1O60336 1514 aa22.33■■□□□ 1.17
PMPCB-203ENST00000443722 KIF13AQ9H1H9 1805 aa22.33■■□□□ 1.16
PMPCB-203ENST00000443722 UACAQ9BZF9 1416 aa22.3■■□□□ 1.16
PMPCB-203ENST00000443722 KIAA0556O60303 1618 aa22.3■■□□□ 1.16
PMPCB-203ENST00000443722 ABCC2Q92887 1545 aa22.29■■□□□ 1.16
PMPCB-203ENST00000443722 DIP2BQ9P265 1576 aa22.27■■□□□ 1.16
PMPCB-203ENST00000443722 CTTNBP2Q8WZ74 1663 aa22.26■■□□□ 1.15
PMPCB-203ENST00000443722 P3H3Q8IVL6 736 aa22.24■■□□□ 1.15
PMPCB-203ENST00000443722 UHRF1BP1LA0JNW5 1464 aa22.23■■□□□ 1.15
PMPCB-203ENST00000443722 ASXL2Q76L83 1435 aa22.22■■□□□ 1.15
PMPCB-203ENST00000443722 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
PMPCB-203ENST00000443722 PLB1Q6P1J6 1458 aa22.21■■□□□ 1.15
PMPCB-203ENST00000443722 RANGAP1P46060 587 aaPredicted RBP22.2■■□□□ 1.14
PMPCB-203ENST00000443722 GOLGA3Q08378 1498 aa22.18■■□□□ 1.14
PMPCB-203ENST00000443722 EHMT2Q96KQ7 1210 aa22.17■■□□□ 1.14
PMPCB-203ENST00000443722 KDM5BQ9UGL1 1544 aa22.16■■□□□ 1.14
PMPCB-203ENST00000443722 EEA1Q15075 1411 aa22.16■■□□□ 1.14
PMPCB-203ENST00000443722 ARID3CA6NKF2 412 aa22.13■■□□□ 1.13
PMPCB-203ENST00000443722 TSPOAP1O95153 1857 aa22.12■■□□□ 1.13
PMPCB-203ENST00000443722 ZCCHC11Q5TAX3 1644 aaKnown RBP22.11■■□□□ 1.13
PMPCB-203ENST00000443722 ABCA8O94911 1581 aa22.08■■□□□ 1.13
PMPCB-203ENST00000443722 EPRSP07814 1512 aaKnown RBP22.07■■□□□ 1.12
PMPCB-203ENST00000443722 KCNH8Q96L42 1107 aa22.05■■□□□ 1.12
PMPCB-203ENST00000443722 GLI2P10070 1586 aa22.03■■□□□ 1.12
PMPCB-203ENST00000443722 WDR7Q9Y4E6 1490 aa22.02■■□□□ 1.12
PMPCB-203ENST00000443722 KDM6BO15054 1643 aa22.01■■□□□ 1.11
PMPCB-203ENST00000443722 AEBP2Q6ZN18 517 aaPredicted RBP22.01■■□□□ 1.11
PMPCB-203ENST00000443722 SAMD9Q5K651 1589 aa22.01■■□□□ 1.11
PMPCB-203ENST00000443722 FHOD3Q2V2M9 1422 aa21.99■■□□□ 1.11
PMPCB-203ENST00000443722 KIF21BO75037 1637 aa21.98■■□□□ 1.11
PMPCB-203ENST00000443722 PPRC1Q5VV67 1664 aaKnown RBP21.97■■□□□ 1.11
PMPCB-203ENST00000443722 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
PMPCB-203ENST00000443722 ATP10BO94823 1461 aa21.96■■□□□ 1.11
PMPCB-203ENST00000443722 MAP3K4Q9Y6R4 1608 aa21.93■■□□□ 1.1
PMPCB-203ENST00000443722 COL17A1Q9UMD9 1497 aaPredicted RBP21.93■■□□□ 1.1
PMPCB-203ENST00000443722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.92■■□□□ 1.1
PMPCB-203ENST00000443722 HNRNPUL2Q1KMD3 747 aaKnown RBP21.92■■□□□ 1.1
PMPCB-203ENST00000443722 CD109Q6YHK3 1445 aa21.89■■□□□ 1.09
PMPCB-203ENST00000443722 RAPGEF6Q8TEU7 1601 aa21.88■■□□□ 1.09
PMPCB-203ENST00000443722 NUP153P49790 1475 aaKnown RBP21.87■■□□□ 1.09
PMPCB-203ENST00000443722 TEX14Q8IWB6 1497 aa21.86■■□□□ 1.09
PMPCB-203ENST00000443722 EFCAB5A4FU69 1503 aa21.82■■□□□ 1.08
PMPCB-203ENST00000443722 KDM4FA0A1W2PPD8 638 aa21.8■■□□□ 1.08
PMPCB-203ENST00000443722 MAGI3Q5TCQ9 1506 aa21.79■■□□□ 1.08
PMPCB-203ENST00000443722 CFAP43Q8NDM7 1665 aa21.78■■□□□ 1.08
PMPCB-203ENST00000443722 ATP1B4Q9UN42 357 aaPredicted RBP21.78■■□□□ 1.08
PMPCB-203ENST00000443722 ARHGAP35Q9NRY4 1499 aa21.76■■□□□ 1.07
PMPCB-203ENST00000443722 PLEKHD1A6NEE1 506 aa21.73■■□□□ 1.07
PMPCB-203ENST00000443722 CDK13Q14004 1512 aaKnown RBP21.71■■□□□ 1.07
PMPCB-203ENST00000443722 ABCA9Q8IUA7 1624 aa21.7■■□□□ 1.06
PMPCB-203ENST00000443722 FMN1Q68DA7 1419 aa21.66■■□□□ 1.06
PMPCB-203ENST00000443722 RAPGEF3O95398 923 aa21.65■■□□□ 1.06
PMPCB-203ENST00000443722 ADGRL1O94910 1474 aa21.62■■□□□ 1.05
PMPCB-203ENST00000443722 ARAP3Q8WWN8 1544 aa21.62■■□□□ 1.05
PMPCB-203ENST00000443722 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.59■■□□□ 1.05
PMPCB-203ENST00000443722 HECW1Q76N89 1606 aa21.57■■□□□ 1.04
PMPCB-203ENST00000443722 TTC37Q6PGP7 1564 aa21.57■■□□□ 1.04
PMPCB-203ENST00000443722 NEO1Q92859 1461 aa21.57■■□□□ 1.04
PMPCB-203ENST00000443722 PHLDB1Q86UU1 1377 aa21.56■■□□□ 1.04
PMPCB-203ENST00000443722 FANCAO15360 1455 aa21.53■■□□□ 1.04
PMPCB-203ENST00000443722 CDK11AQ9UQ88 783 aaPredicted RBP21.52■■□□□ 1.03
PMPCB-203ENST00000443722 CLIP1P30622 1438 aa21.52■■□□□ 1.03
PMPCB-203ENST00000443722 AKNAQ7Z591 1439 aa21.52■■□□□ 1.03
PMPCB-203ENST00000443722 PCF11O94913 1555 aaKnown RBP21.49■■□□□ 1.03
PMPCB-203ENST00000443722 FRMPD1Q5SYB0 1578 aa21.48■■□□□ 1.03
PMPCB-203ENST00000443722 CASKIN1Q8WXD9 1431 aa21.48■■□□□ 1.03
PMPCB-203ENST00000443722 KIF14Q15058 1648 aa21.47■■□□□ 1.03
PMPCB-203ENST00000443722 LRRIQ1Q96JM4 1722 aa21.47■■□□□ 1.03
PMPCB-203ENST00000443722 PLCH2O75038 1416 aa21.46■■□□□ 1.03
PMPCB-203ENST00000443722 TROQ12816 1431 aaPredicted RBP21.46■■□□□ 1.03
PMPCB-203ENST00000443722 DENND4BO75064 1496 aaPredicted RBP21.46■■□□□ 1.03
PMPCB-203ENST00000443722 SCAPERQ9BY12 1400 aa21.41■■□□□ 1.02
PMPCB-203ENST00000443722 EFCAB2Q5VUJ9 269 aa21.41■■□□□ 1.02
PMPCB-203ENST00000443722 ARID4BQ4LE39 1312 aaPredicted RBP21.41■■□□□ 1.02
PMPCB-203ENST00000443722 LOC105371045A0A1W2PR82 267 aa21.4■■□□□ 1.02
PMPCB-203ENST00000443722 CFAP74Q9C0B2 1584 aa21.39■■□□□ 1.01
PMPCB-203ENST00000443722 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.01
PMPCB-203ENST00000443722 FYCO1Q9BQS8 1478 aa21.39■■□□□ 1.01
PMPCB-203ENST00000443722 RICTORQ6R327 1708 aa21.37■■□□□ 1.01
PMPCB-203ENST00000443722 YEATS2Q9ULM3 1422 aa21.37■■□□□ 1.01
PMPCB-203ENST00000443722 ARHGAP5Q13017 1502 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms