RNA–Protein interactions for RNA: ENST00000443203.5

NELFA-208, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-208ENST00000443203 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
NELFA-208ENST00000443203 RUSC2Q8N2Y8 1516 aa23.37■■□□□ 1.33
NELFA-208ENST00000443203 IGF1RP08069 1367 aa23.37■■□□□ 1.33
NELFA-208ENST00000443203 EEA1Q15075 1411 aa23.36■■□□□ 1.33
NELFA-208ENST00000443203 FAM9AQ8IZU1 332 aaPredicted RBP23.33■■□□□ 1.33
NELFA-208ENST00000443203 CSRNP3Q8WYN3 585 aa23.31■■□□□ 1.32
NELFA-208ENST00000443203 KIF13AQ9H1H9 1805 aa23.3■■□□□ 1.32
NELFA-208ENST00000443203 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.32
NELFA-208ENST00000443203 NPM1P06748 294 aaKnown RBP eCLIP23.25■■□□□ 1.31
NELFA-208ENST00000443203 CUL7Q14999 1698 aa23.22■■□□□ 1.31
NELFA-208ENST00000443203 KIAA0586Q9BVV6 1533 aa23.18■■□□□ 1.3
NELFA-208ENST00000443203 FAM69CQ0P6D2 419 aa23.16■■□□□ 1.3
NELFA-208ENST00000443203 RAPGEF2Q9Y4G8 1499 aa23.15■■□□□ 1.3
NELFA-208ENST00000443203 ABCC10Q5T3U5 1492 aa23.13■■□□□ 1.29
NELFA-208ENST00000443203 PRXQ9BXM0 1461 aa23.13■■□□□ 1.29
NELFA-208ENST00000443203 MAPKBP1O60336 1514 aa23.11■■□□□ 1.29
NELFA-208ENST00000443203 ADCY10Q96PN6 1610 aa23.07■■□□□ 1.28
NELFA-208ENST00000443203 DIP2BQ9P265 1576 aa23.05■■□□□ 1.28
NELFA-208ENST00000443203 PTPRGP23470 1445 aa23.01■■□□□ 1.27
NELFA-208ENST00000443203 KIF21BO75037 1637 aa23■■□□□ 1.27
NELFA-208ENST00000443203 CARMIL2Q6F5E8 1435 aa22.99■■□□□ 1.27
NELFA-208ENST00000443203 EHMT2Q96KQ7 1210 aa22.98■■□□□ 1.27
NELFA-208ENST00000443203 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
NELFA-208ENST00000443203 TTBK1Q5TCY1 1321 aaPredicted RBP22.96■■□□□ 1.27
NELFA-208ENST00000443203 GOLGA3Q08378 1498 aa22.96■■□□□ 1.27
NELFA-208ENST00000443203 TSPOAP1O95153 1857 aa22.95■■□□□ 1.26
NELFA-208ENST00000443203 TNIKQ9UKE5 1360 aa22.95■■□□□ 1.26
NELFA-208ENST00000443203 KDM6BO15054 1643 aa22.94■■□□□ 1.26
NELFA-208ENST00000443203 KDM4FA0A1W2PPD8 638 aa22.93■■□□□ 1.26
NELFA-208ENST00000443203 IQGAP2Q13576 1575 aa22.89■■□□□ 1.26
NELFA-208ENST00000443203 ABCC2Q92887 1545 aa22.88■■□□□ 1.25
NELFA-208ENST00000443203 PLB1Q6P1J6 1458 aa22.83■■□□□ 1.25
NELFA-208ENST00000443203 ASXL2Q76L83 1435 aa22.82■■□□□ 1.24
NELFA-208ENST00000443203 UACAQ9BZF9 1416 aa22.82■■□□□ 1.24
NELFA-208ENST00000443203 UHRF1BP1LA0JNW5 1464 aa22.82■■□□□ 1.24
NELFA-208ENST00000443203 LOC105371045A0A1W2PR82 267 aa22.8■■□□□ 1.24
NELFA-208ENST00000443203 CTTNBP2Q8WZ74 1663 aa22.8■■□□□ 1.24
NELFA-208ENST00000443203 DISP1Q96F81 1524 aa22.79■■□□□ 1.24
NELFA-208ENST00000443203 GLI2P10070 1586 aa22.76■■□□□ 1.23
NELFA-208ENST00000443203 RANGAP1P46060 587 aaPredicted RBP22.75■■□□□ 1.23
NELFA-208ENST00000443203 UGGT2Q9NYU1 1516 aa22.75■■□□□ 1.23
NELFA-208ENST00000443203 PPRC1Q5VV67 1664 aaKnown RBP22.74■■□□□ 1.23
NELFA-208ENST00000443203 KDM5BQ9UGL1 1544 aa22.72■■□□□ 1.23
NELFA-208ENST00000443203 KIAA0556O60303 1618 aa22.68■■□□□ 1.22
NELFA-208ENST00000443203 EPRSP07814 1512 aaKnown RBP22.67■■□□□ 1.22
NELFA-208ENST00000443203 TEX14Q8IWB6 1497 aa22.63■■□□□ 1.21
NELFA-208ENST00000443203 COL17A1Q9UMD9 1497 aaPredicted RBP22.63■■□□□ 1.21
NELFA-208ENST00000443203 P3H3Q8IVL6 736 aa22.63■■□□□ 1.21
NELFA-208ENST00000443203 ZCCHC11Q5TAX3 1644 aaKnown RBP22.63■■□□□ 1.21
NELFA-208ENST00000443203 ADGRL1O94910 1474 aa22.61■■□□□ 1.21
NELFA-208ENST00000443203 MAP3K4Q9Y6R4 1608 aa22.6■■□□□ 1.21
NELFA-208ENST00000443203 EFCAB5A4FU69 1503 aa22.58■■□□□ 1.21
NELFA-208ENST00000443203 ILDR1Q86SU0 546 aaPredicted RBP22.58■■□□□ 1.21
NELFA-208ENST00000443203 WDR7Q9Y4E6 1490 aa22.57■■□□□ 1.2
NELFA-208ENST00000443203 CLIP1P30622 1438 aa22.57■■□□□ 1.2
NELFA-208ENST00000443203 SAMD9Q5K651 1589 aa22.55■■□□□ 1.2
NELFA-208ENST00000443203 CEP162Q5TB80 1403 aa22.53■■□□□ 1.2
NELFA-208ENST00000443203 ARHGAP35Q9NRY4 1499 aa22.53■■□□□ 1.2
NELFA-208ENST00000443203 FHOD3Q2V2M9 1422 aa22.5■■□□□ 1.19
NELFA-208ENST00000443203 KCNH8Q96L42 1107 aa22.5■■□□□ 1.19
NELFA-208ENST00000443203 ABCA8O94911 1581 aa22.49■■□□□ 1.19
NELFA-208ENST00000443203 CD109Q6YHK3 1445 aa22.48■■□□□ 1.19
NELFA-208ENST00000443203 MAGI3Q5TCQ9 1506 aa22.45■■□□□ 1.18
NELFA-208ENST00000443203 FMN1Q68DA7 1419 aa22.43■■□□□ 1.18
NELFA-208ENST00000443203 CFAP43Q8NDM7 1665 aa22.42■■□□□ 1.18
NELFA-208ENST00000443203 HECW2Q9P2P5 1572 aa22.41■■□□□ 1.18
NELFA-208ENST00000443203 ARID3CA6NKF2 412 aa22.35■■□□□ 1.17
NELFA-208ENST00000443203 ATP1B4Q9UN42 357 aaPredicted RBP22.35■■□□□ 1.17
NELFA-208ENST00000443203 ATP10BO94823 1461 aa22.33■■□□□ 1.16
NELFA-208ENST00000443203 RAPGEF6Q8TEU7 1601 aa22.28■■□□□ 1.16
NELFA-208ENST00000443203 PHLDB1Q86UU1 1377 aa22.27■■□□□ 1.16
NELFA-208ENST00000443203 ARAP3Q8WWN8 1544 aa22.27■■□□□ 1.16
NELFA-208ENST00000443203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.27■■□□□ 1.16
NELFA-208ENST00000443203 HNRNPUL2Q1KMD3 747 aaKnown RBP22.27■■□□□ 1.16
NELFA-208ENST00000443203 CASKIN1Q8WXD9 1431 aa22.27■■□□□ 1.16
NELFA-208ENST00000443203 VPS8Q8N3P4 1428 aa22.25■■□□□ 1.15
NELFA-208ENST00000443203 ABCA9Q8IUA7 1624 aa22.22■■□□□ 1.15
NELFA-208ENST00000443203 NUP153P49790 1475 aaKnown RBP22.22■■□□□ 1.15
NELFA-208ENST00000443203 FYCO1Q9BQS8 1478 aa22.21■■□□□ 1.15
NELFA-208ENST00000443203 HECW1Q76N89 1606 aa22.2■■□□□ 1.15
NELFA-208ENST00000443203 PCF11O94913 1555 aaKnown RBP22.18■■□□□ 1.14
NELFA-208ENST00000443203 NEO1Q92859 1461 aa22.17■■□□□ 1.14
NELFA-208ENST00000443203 APLP2Q06481 763 aa22.17■■□□□ 1.14
NELFA-208ENST00000443203 CDK11AQ9UQ88 783 aaPredicted RBP22.17■■□□□ 1.14
NELFA-208ENST00000443203 RAPGEF3O95398 923 aa22.16■■□□□ 1.14
NELFA-208ENST00000443203 CCDC18Q5T9S5 1454 aa22.15■■□□□ 1.14
NELFA-208ENST00000443203 PLEKHD1A6NEE1 506 aa22.14■■□□□ 1.13
NELFA-208ENST00000443203 ADAMTSL3P82987 1691 aa22.1■■□□□ 1.13
NELFA-208ENST00000443203 CDK13Q14004 1512 aaKnown RBP22.09■■□□□ 1.13
NELFA-208ENST00000443203 PTPRMP28827 1452 aa22.08■■□□□ 1.12
NELFA-208ENST00000443203 ARID4BQ4LE39 1312 aaPredicted RBP22.06■■□□□ 1.12
NELFA-208ENST00000443203 FBXO41Q8TF61 875 aa22.04■■□□□ 1.12
NELFA-208ENST00000443203 DENND4BO75064 1496 aaPredicted RBP22.02■■□□□ 1.12
NELFA-208ENST00000443203 FRMPD1Q5SYB0 1578 aa22.01■■□□□ 1.11
NELFA-208ENST00000443203 BCORL1Q5H9F3 1711 aa22■■□□□ 1.11
NELFA-208ENST00000443203 AKNAQ7Z591 1439 aa22■■□□□ 1.11
NELFA-208ENST00000443203 MAP3K1Q13233 1512 aa22■■□□□ 1.11
NELFA-208ENST00000443203 MTUS2Q5JR59 1369 aa21.99■■□□□ 1.11
NELFA-208ENST00000443203 FANCAO15360 1455 aa21.99■■□□□ 1.11
NELFA-208ENST00000443203 LRRIQ1Q96JM4 1722 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms