RNA–Protein interactions for RNA: ENST00000442934.6

MSI2-204, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,624 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-204ENST00000442934 EFCAB5A4FU69 1503 aa25.07■■□□□ 1.6
MSI2-204ENST00000442934 RANGAP1P46060 587 aaPredicted RBP25.03■■□□□ 1.6
MSI2-204ENST00000442934 MAGI1Q96QZ7 1491 aaPredicted RBP24.98■■□□□ 1.59
MSI2-204ENST00000442934 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
MSI2-204ENST00000442934 APLP2Q06481 763 aa24.93■■□□□ 1.58
MSI2-204ENST00000442934 SAMD9Q5K651 1589 aa24.92■■□□□ 1.58
MSI2-204ENST00000442934 PPARGC1BQ86YN6 1023 aaKnown RBP24.88■■□□□ 1.57
MSI2-204ENST00000442934 IQGAP2Q13576 1575 aa24.88■■□□□ 1.57
MSI2-204ENST00000442934 GRIN2AQ12879 1464 aa24.86■■□□□ 1.57
MSI2-204ENST00000442934 SYNJ2O15056 1496 aa24.86■■□□□ 1.57
MSI2-204ENST00000442934 MAP3K1Q13233 1512 aa24.84■■□□□ 1.57
MSI2-204ENST00000442934 FMN1Q68DA7 1419 aa24.8■■□□□ 1.56
MSI2-204ENST00000442934 KIAA0586Q9BVV6 1533 aa24.79■■□□□ 1.56
MSI2-204ENST00000442934 FHOD3Q2V2M9 1422 aa24.79■■□□□ 1.56
MSI2-204ENST00000442934 FYCO1Q9BQS8 1478 aa24.78■■□□□ 1.56
MSI2-204ENST00000442934 PCF11O94913 1555 aaKnown RBP24.77■■□□□ 1.56
MSI2-204ENST00000442934 UGGT2Q9NYU1 1516 aa24.77■■□□□ 1.56
MSI2-204ENST00000442934 TIAM1Q13009 1591 aa24.75■■□□□ 1.55
MSI2-204ENST00000442934 CFAP43Q8NDM7 1665 aa24.74■■□□□ 1.55
MSI2-204ENST00000442934 CASKIN1Q8WXD9 1431 aa24.74■■□□□ 1.55
MSI2-204ENST00000442934 CHMP7Q8WUX9 453 aaPredicted RBP24.7■■□□□ 1.54
MSI2-204ENST00000442934 CEP170Q5SW79 1584 aa24.69■■□□□ 1.54
MSI2-204ENST00000442934 NUP160Q12769 1436 aa24.68■■□□□ 1.54
MSI2-204ENST00000442934 P3H3Q8IVL6 736 aa24.68■■□□□ 1.54
MSI2-204ENST00000442934 TTBK1Q5TCY1 1321 aaPredicted RBP24.66■■□□□ 1.54
MSI2-204ENST00000442934 KIAA0556O60303 1618 aa24.62■■□□□ 1.53
MSI2-204ENST00000442934 LRRC9Q6ZRR7 1453 aa24.59■■□□□ 1.53
MSI2-204ENST00000442934 HRCP23327 699 aa24.58■■□□□ 1.53
MSI2-204ENST00000442934 KANK4Q5T7N3 995 aaPredicted RBP24.58■■□□□ 1.53
MSI2-204ENST00000442934 DISP1Q96F81 1524 aa24.57■■□□□ 1.52
MSI2-204ENST00000442934 CHD1O14646 1710 aa24.56■■□□□ 1.52
MSI2-204ENST00000442934 HECW1Q76N89 1606 aa24.55■■□□□ 1.52
MSI2-204ENST00000442934 FBLN2P98095 1184 aa24.54■■□□□ 1.52
MSI2-204ENST00000442934 LRRIQ1Q96JM4 1722 aa24.52■■□□□ 1.52
MSI2-204ENST00000442934 CCDC18Q5T9S5 1454 aa24.52■■□□□ 1.52
MSI2-204ENST00000442934 RRBP1Q9P2E9 1410 aaKnown RBP24.49■■□□□ 1.51
MSI2-204ENST00000442934 CARMIL2Q6F5E8 1435 aa24.48■■□□□ 1.51
MSI2-204ENST00000442934 ATP1B4Q9UN42 357 aaPredicted RBP24.45■■□□□ 1.5
MSI2-204ENST00000442934 EHBP1L1Q8N3D4 1523 aa24.42■■□□□ 1.5
MSI2-204ENST00000442934 RAPGEF6Q8TEU7 1601 aa24.41■■□□□ 1.5
MSI2-204ENST00000442934 JPH4Q96JJ6 628 aa24.41■■□□□ 1.5
MSI2-204ENST00000442934 EPRSP07814 1512 aaKnown RBP24.38■■□□□ 1.49
MSI2-204ENST00000442934 SHROOM2Q13796 1616 aa24.38■■□□□ 1.49
MSI2-204ENST00000442934 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
MSI2-204ENST00000442934 MTUS2Q5JR59 1369 aa24.36■■□□□ 1.49
MSI2-204ENST00000442934 SUPT6HQ7KZ85 1726 aaKnown RBP24.36■■□□□ 1.49
MSI2-204ENST00000442934 ZEB1P37275 1124 aaPredicted RBP24.35■■□□□ 1.49
MSI2-204ENST00000442934 PHLDB1Q86UU1 1377 aa24.31■■□□□ 1.48
MSI2-204ENST00000442934 NUP153P49790 1475 aaKnown RBP24.29■■□□□ 1.48
MSI2-204ENST00000442934 CLASP1Q7Z460 1538 aa24.28■■□□□ 1.48
MSI2-204ENST00000442934 PRG4Q92954 1404 aaPredicted RBP24.27■■□□□ 1.48
MSI2-204ENST00000442934 CDK13Q14004 1512 aaKnown RBP24.27■■□□□ 1.47
MSI2-204ENST00000442934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.26■■□□□ 1.475e-6■■■□□ 14.8
MSI2-204ENST00000442934 ARHGEF11O15085 1522 aa24.26■■□□□ 1.47
MSI2-204ENST00000442934 MAGI3Q5TCQ9 1506 aa24.26■■□□□ 1.47
MSI2-204ENST00000442934 ABCA8O94911 1581 aa24.25■■□□□ 1.47
MSI2-204ENST00000442934 NCOA2Q15596 1464 aa24.25■■□□□ 1.47
MSI2-204ENST00000442934 HNRNPUL2Q1KMD3 747 aaKnown RBP24.24■■□□□ 1.47
MSI2-204ENST00000442934 PLB1Q6P1J6 1458 aa24.21■■□□□ 1.47
MSI2-204ENST00000442934 FGD6Q6ZV73 1430 aa24.19■■□□□ 1.46
MSI2-204ENST00000442934 MYOM3Q5VTT5 1437 aa24.18■■□□□ 1.46
MSI2-204ENST00000442934 CDK11AQ9UQ88 783 aaPredicted RBP24.17■■□□□ 1.46
MSI2-204ENST00000442934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.15■■□□□ 1.46
MSI2-204ENST00000442934 CCER1Q8TC90 406 aaPredicted RBP24.15■■□□□ 1.46
MSI2-204ENST00000442934 PTPRGP23470 1445 aa24.15■■□□□ 1.46
MSI2-204ENST00000442934 ADCY10Q96PN6 1610 aa24.13■■□□□ 1.45
MSI2-204ENST00000442934 TROQ12816 1431 aaPredicted RBP24.09■■□□□ 1.45
MSI2-204ENST00000442934 PTPN23Q9H3S7 1636 aa24.08■■□□□ 1.45
MSI2-204ENST00000442934 MIA2Q96PC5 1412 aa24.08■■□□□ 1.45
MSI2-204ENST00000442934 FAM50AQ14320 339 aaKnown RBP24.06■■□□□ 1.44
MSI2-204ENST00000442934 TCOF1Q13428 1488 aaKnown RBP24.06■■□□□ 1.44
MSI2-204ENST00000442934 ERCC6L2Q5T890 1561 aa24.05■■□□□ 1.44
MSI2-204ENST00000442934 UACAQ9BZF9 1416 aa24.04■■□□□ 1.44
MSI2-204ENST00000442934 ATP10BO94823 1461 aa24.03■■□□□ 1.44
MSI2-204ENST00000442934 ITSN2Q9NZM3 1697 aa24.03■■□□□ 1.44
MSI2-204ENST00000442934 ARID3CA6NKF2 412 aa24.02■■□□□ 1.44
MSI2-204ENST00000442934 ABCC2Q92887 1545 aa24.01■■□□□ 1.43
MSI2-204ENST00000442934 KIF14Q15058 1648 aa23.98■■□□□ 1.43
MSI2-204ENST00000442934 ITGAEP38570 1179 aa23.97■■□□□ 1.43
MSI2-204ENST00000442934 UHRF1BP1LA0JNW5 1464 aa23.96■■□□□ 1.43
MSI2-204ENST00000442934 SETD5Q9C0A6 1442 aa23.95■■□□□ 1.43
MSI2-204ENST00000442934 PLEKHD1A6NEE1 506 aa23.94■■□□□ 1.42
MSI2-204ENST00000442934 CLSPNQ9HAW4 1339 aa23.93■■□□□ 1.42
MSI2-204ENST00000442934 RAB3GAP2Q9H2M9 1393 aa23.89■■□□□ 1.42
MSI2-204ENST00000442934 ABCC10Q5T3U5 1492 aa23.88■■□□□ 1.41
MSI2-204ENST00000442934 DHX57Q6P158 1386 aaKnown RBP23.88■■□□□ 1.41
MSI2-204ENST00000442934 OSCARQ8IYS5 282 aa23.88■■□□□ 1.41
MSI2-204ENST00000442934 GPATCH8Q9UKJ3 1502 aaKnown RBP23.86■■□□□ 1.41
MSI2-204ENST00000442934 CDC42BPAQ5VT25 1732 aa23.86■■□□□ 1.41
MSI2-204ENST00000442934 HFM1A2PYH4 1435 aa23.86■■□□□ 1.41
MSI2-204ENST00000442934 AKNAQ7Z591 1439 aa23.86■■□□□ 1.41
MSI2-204ENST00000442934 DNMT1P26358 1616 aaKnown RBP23.86■■□□□ 1.41
MSI2-204ENST00000442934 KDM5BQ9UGL1 1544 aa23.85■■□□□ 1.41
MSI2-204ENST00000442934 PTPRKQ15262 1439 aa23.84■■□□□ 1.41
MSI2-204ENST00000442934 ZCCHC11Q5TAX3 1644 aaKnown RBP23.84■■□□□ 1.41
MSI2-204ENST00000442934 GCC2Q8IWJ2 1684 aa23.82■■□□□ 1.4
MSI2-204ENST00000442934 CAMSAP2Q08AD1 1489 aa23.79■■□□□ 1.4
MSI2-204ENST00000442934 PREX2Q70Z35 1606 aa23.78■■□□□ 1.4
MSI2-204ENST00000442934 DAPK1P53355 1430 aa23.77■■□□□ 1.4
MSI2-204ENST00000442934 CFDP1Q9UEE9 299 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms