RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 CUL7Q14999 1698 aa24.23■■□□□ 1.47
PTPRE-203ENST00000442830 JPH4Q96JJ6 628 aa24.21■■□□□ 1.47
PTPRE-203ENST00000442830 KIF27Q86VH2 1401 aa24.19■■□□□ 1.46
PTPRE-203ENST00000442830 KIAA0586Q9BVV6 1533 aa24.12■■□□□ 1.45
PTPRE-203ENST00000442830 IGF1RP08069 1367 aa24.1■■□□□ 1.45
PTPRE-203ENST00000442830 KIF13AQ9H1H9 1805 aa24.08■■□□□ 1.45
PTPRE-203ENST00000442830 NPM1P06748 294 aaKnown RBP eCLIP24.05■■□□□ 1.44
PTPRE-203ENST00000442830 MAPKBP1O60336 1514 aa24.04■■□□□ 1.44
PTPRE-203ENST00000442830 CARMIL1Q5VZK9 1371 aa23.98■■□□□ 1.43
PTPRE-203ENST00000442830 ADCY10Q96PN6 1610 aa23.98■■□□□ 1.43
PTPRE-203ENST00000442830 ABCC10Q5T3U5 1492 aa23.97■■□□□ 1.43
PTPRE-203ENST00000442830 CARMIL2Q6F5E8 1435 aa23.93■■□□□ 1.42
PTPRE-203ENST00000442830 DIP2BQ9P265 1576 aa23.91■■□□□ 1.42
PTPRE-203ENST00000442830 IQGAP2Q13576 1575 aa23.91■■□□□ 1.42
PTPRE-203ENST00000442830 FAM69CQ0P6D2 419 aa23.88■■□□□ 1.41
PTPRE-203ENST00000442830 PTPRGP23470 1445 aa23.87■■□□□ 1.41
PTPRE-203ENST00000442830 TNIKQ9UKE5 1360 aa23.86■■□□□ 1.41
PTPRE-203ENST00000442830 RAPGEF2Q9Y4G8 1499 aa23.8■■□□□ 1.4
PTPRE-203ENST00000442830 ABCC2Q92887 1545 aa23.79■■□□□ 1.4
PTPRE-203ENST00000442830 UHRF1BP1LA0JNW5 1464 aa23.76■■□□□ 1.39
PTPRE-203ENST00000442830 UGGT2Q9NYU1 1516 aa23.74■■□□□ 1.39
PTPRE-203ENST00000442830 PLB1Q6P1J6 1458 aa23.74■■□□□ 1.39
PTPRE-203ENST00000442830 KDM6BO15054 1643 aa23.73■■□□□ 1.39
PTPRE-203ENST00000442830 TSPOAP1O95153 1857 aa23.73■■□□□ 1.39
PTPRE-203ENST00000442830 DISP1Q96F81 1524 aa23.71■■□□□ 1.39
PTPRE-203ENST00000442830 UACAQ9BZF9 1416 aa23.71■■□□□ 1.39
PTPRE-203ENST00000442830 GLI2P10070 1586 aa23.69■■□□□ 1.38
PTPRE-203ENST00000442830 CTTNBP2Q8WZ74 1663 aa23.67■■□□□ 1.38
PTPRE-203ENST00000442830 KIAA0556O60303 1618 aa23.66■■□□□ 1.38
PTPRE-203ENST00000442830 ASXL2Q76L83 1435 aa23.66■■□□□ 1.38
PTPRE-203ENST00000442830 TTBK1Q5TCY1 1321 aaPredicted RBP23.64■■□□□ 1.38
PTPRE-203ENST00000442830 KDM5BQ9UGL1 1544 aa23.63■■□□□ 1.37
PTPRE-203ENST00000442830 GOLGA3Q08378 1498 aa23.62■■□□□ 1.37
PTPRE-203ENST00000442830 ZCCHC11Q5TAX3 1644 aaKnown RBP23.57■■□□□ 1.36
PTPRE-203ENST00000442830 PPRC1Q5VV67 1664 aaKnown RBP23.55■■□□□ 1.36
PTPRE-203ENST00000442830 TEX14Q8IWB6 1497 aa23.54■■□□□ 1.36
PTPRE-203ENST00000442830 EPRSP07814 1512 aaKnown RBP23.54■■□□□ 1.36
PTPRE-203ENST00000442830 MAP3K4Q9Y6R4 1608 aa23.53■■□□□ 1.36
PTPRE-203ENST00000442830 PRXQ9BXM0 1461 aa23.51■■□□□ 1.35
PTPRE-203ENST00000442830 FAM9AQ8IZU1 332 aaPredicted RBP23.48■■□□□ 1.35
PTPRE-203ENST00000442830 WDR7Q9Y4E6 1490 aa23.47■■□□□ 1.35
PTPRE-203ENST00000442830 ABCA8O94911 1581 aa23.44■■□□□ 1.34
PTPRE-203ENST00000442830 CFAP43Q8NDM7 1665 aa23.41■■□□□ 1.34
PTPRE-203ENST00000442830 KDM4FA0A1W2PPD8 638 aa23.36■■□□□ 1.33
PTPRE-203ENST00000442830 EEA1Q15075 1411 aa23.34■■□□□ 1.33
PTPRE-203ENST00000442830 MAGI3Q5TCQ9 1506 aa23.34■■□□□ 1.33
PTPRE-203ENST00000442830 CD109Q6YHK3 1445 aa23.31■■□□□ 1.32
PTPRE-203ENST00000442830 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
PTPRE-203ENST00000442830 COL17A1Q9UMD9 1497 aaPredicted RBP23.29■■□□□ 1.32
PTPRE-203ENST00000442830 SAMD9Q5K651 1589 aa23.27■■□□□ 1.32
PTPRE-203ENST00000442830 ADGRL1O94910 1474 aa23.26■■□□□ 1.31
PTPRE-203ENST00000442830 KCNH8Q96L42 1107 aa23.22■■□□□ 1.31
PTPRE-203ENST00000442830 RAPGEF6Q8TEU7 1601 aa23.21■■□□□ 1.31
PTPRE-203ENST00000442830 PHLDB1Q86UU1 1377 aa23.2■■□□□ 1.3
PTPRE-203ENST00000442830 ATP10BO94823 1461 aa23.19■■□□□ 1.3
PTPRE-203ENST00000442830 ABCA9Q8IUA7 1624 aa23.18■■□□□ 1.3
PTPRE-203ENST00000442830 ARAP3Q8WWN8 1544 aa23.16■■□□□ 1.3
PTPRE-203ENST00000442830 P3H3Q8IVL6 736 aa23.14■■□□□ 1.29
PTPRE-203ENST00000442830 EFCAB5A4FU69 1503 aa23.11■■□□□ 1.29
PTPRE-203ENST00000442830 KIF21BO75037 1637 aa23.11■■□□□ 1.29
PTPRE-203ENST00000442830 NEO1Q92859 1461 aa23.08■■□□□ 1.29
PTPRE-203ENST00000442830 NUP153P49790 1475 aaKnown RBP23.05■■□□□ 1.28
PTPRE-203ENST00000442830 ARID3CA6NKF2 412 aa23.04■■□□□ 1.28
PTPRE-203ENST00000442830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.04■■□□□ 1.28
PTPRE-203ENST00000442830 HNRNPUL2Q1KMD3 747 aaKnown RBP23.04■■□□□ 1.28
PTPRE-203ENST00000442830 FHOD3Q2V2M9 1422 aa23.01■■□□□ 1.27
PTPRE-203ENST00000442830 CFAP74Q9C0B2 1584 aa23.01■■□□□ 1.27
PTPRE-203ENST00000442830 PLEKHD1A6NEE1 506 aa22.98■■□□□ 1.27
PTPRE-203ENST00000442830 HECW2Q9P2P5 1572 aa22.97■■□□□ 1.27
PTPRE-203ENST00000442830 RANGAP1P46060 587 aaPredicted RBP22.92■■□□□ 1.26
PTPRE-203ENST00000442830 FRMPD1Q5SYB0 1578 aa22.89■■□□□ 1.26
PTPRE-203ENST00000442830 ADAMTSL3P82987 1691 aa22.88■■□□□ 1.25
PTPRE-203ENST00000442830 FMN1Q68DA7 1419 aa22.88■■□□□ 1.25
PTPRE-203ENST00000442830 FANCAO15360 1455 aa22.87■■□□□ 1.25
PTPRE-203ENST00000442830 DENND4BO75064 1496 aaPredicted RBP22.87■■□□□ 1.25
PTPRE-203ENST00000442830 RICTORQ6R327 1708 aa22.87■■□□□ 1.25
PTPRE-203ENST00000442830 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.87■■□□□ 1.25
PTPRE-203ENST00000442830 RAPGEF3O95398 923 aa22.86■■□□□ 1.25
PTPRE-203ENST00000442830 ARHGEF40Q8TER5 1519 aa22.86■■□□□ 1.25
PTPRE-203ENST00000442830 HECW1Q76N89 1606 aa22.86■■□□□ 1.25
PTPRE-203ENST00000442830 BCORL1Q5H9F3 1711 aa22.85■■□□□ 1.25
PTPRE-203ENST00000442830 AKNAQ7Z591 1439 aa22.84■■□□□ 1.25
PTPRE-203ENST00000442830 TTC37Q6PGP7 1564 aa22.82■■□□□ 1.24
PTPRE-203ENST00000442830 UBTFP17480 764 aaKnown RBP22.82■■□□□ 1.24
PTPRE-203ENST00000442830 ZMYM4Q5VZL5 1548 aa22.82■■□□□ 1.24
PTPRE-203ENST00000442830 PTPRMP28827 1452 aa22.8■■□□□ 1.24
PTPRE-203ENST00000442830 CDK11AQ9UQ88 783 aaPredicted RBP22.8■■□□□ 1.24
PTPRE-203ENST00000442830 MAGI2Q86UL8 1455 aa22.79■■□□□ 1.24
PTPRE-203ENST00000442830 CDK13Q14004 1512 aaKnown RBP22.79■■□□□ 1.24
PTPRE-203ENST00000442830 POGZQ7Z3K3 1410 aa22.77■■□□□ 1.24
PTPRE-203ENST00000442830 ARID4BQ4LE39 1312 aaPredicted RBP22.77■■□□□ 1.24
PTPRE-203ENST00000442830 MYO5CQ9NQX4 1742 aa22.76■■□□□ 1.23
PTPRE-203ENST00000442830 ARHGAP35Q9NRY4 1499 aa22.75■■□□□ 1.23
PTPRE-203ENST00000442830 PLCH2O75038 1416 aa22.74■■□□□ 1.23
PTPRE-203ENST00000442830 ZFYVE16Q7Z3T8 1539 aa22.74■■□□□ 1.23
PTPRE-203ENST00000442830 MADDQ8WXG6 1647 aa22.74■■□□□ 1.23
PTPRE-203ENST00000442830 KIF14Q15058 1648 aa22.72■■□□□ 1.23
PTPRE-203ENST00000442830 CLIP1P30622 1438 aa22.71■■□□□ 1.23
PTPRE-203ENST00000442830 ILDR1Q86SU0 546 aaPredicted RBP22.69■■□□□ 1.22
PTPRE-203ENST00000442830 RIMS1Q86UR5 1692 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms