RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 CUX1P39880 1505 aa11.79□□□□□ -0.52
HDAC6-210ENST00000441703 ABCA5Q8WWZ7 1642 aa11.77□□□□□ -0.53
HDAC6-210ENST00000441703 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-210ENST00000441703 LMTK3Q96Q04 1460 aa11.75□□□□□ -0.53
HDAC6-210ENST00000441703 ADAMTS12P58397 1594 aa11.75□□□□□ -0.53
HDAC6-210ENST00000441703 ABCA10Q8WWZ4 1543 aa11.74□□□□□ -0.53
HDAC6-210ENST00000441703 FHAD1B1AJZ9 1412 aa11.7□□□□□ -0.54
HDAC6-210ENST00000441703 JPH4Q96JJ6 628 aa11.7□□□□□ -0.54
HDAC6-210ENST00000441703 ADCY10Q96PN6 1610 aa11.69□□□□□ -0.54
HDAC6-210ENST00000441703 SOCS7O14512 581 aa11.67□□□□□ -0.54
HDAC6-210ENST00000441703 TOP2BQ02880 1626 aa11.62□□□□□ -0.55
HDAC6-210ENST00000441703 WRNQ14191 1432 aaPredicted RBP eCLIP11.6□□□□□ -0.55
HDAC6-210ENST00000441703 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
HDAC6-210ENST00000441703 RUSC2Q8N2Y8 1516 aa11.6□□□□□ -0.55
HDAC6-210ENST00000441703 PPRC1Q5VV67 1664 aaKnown RBP11.59□□□□□ -0.55
HDAC6-210ENST00000441703 DISP3Q9P2K9 1392 aa11.57□□□□□ -0.56
HDAC6-210ENST00000441703 ILDR2Q71H61 639 aa11.57□□□□□ -0.56
HDAC6-210ENST00000441703 GLI2P10070 1586 aa11.57□□□□□ -0.56
HDAC6-210ENST00000441703 PLB1Q6P1J6 1458 aa11.56□□□□□ -0.56
HDAC6-210ENST00000441703 TEX14Q8IWB6 1497 aa11.56□□□□□ -0.56
HDAC6-210ENST00000441703 COL17A1Q9UMD9 1497 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-210ENST00000441703 TTBK1Q5TCY1 1321 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-210ENST00000441703 ASXL2Q76L83 1435 aa11.54□□□□□ -0.56
HDAC6-210ENST00000441703 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.57
HDAC6-210ENST00000441703 PTPRGP23470 1445 aa11.52□□□□□ -0.57
HDAC6-210ENST00000441703 ABCC2Q92887 1545 aa11.51□□□□□ -0.57
HDAC6-210ENST00000441703 MAP3K4Q9Y6R4 1608 aa11.48□□□□□ -0.57
HDAC6-210ENST00000441703 CUL7Q14999 1698 aa11.48□□□□□ -0.57
HDAC6-210ENST00000441703 KIAA0586Q9BVV6 1533 aa11.47□□□□□ -0.57
HDAC6-210ENST00000441703 EPRSP07814 1512 aaKnown RBP11.46□□□□□ -0.57
HDAC6-210ENST00000441703 TNIKQ9UKE5 1360 aa11.44□□□□□ -0.58
HDAC6-210ENST00000441703 KIF21BO75037 1637 aa11.44□□□□□ -0.58
HDAC6-210ENST00000441703 CARMIL2Q6F5E8 1435 aa11.43□□□□□ -0.58
HDAC6-210ENST00000441703 CERKQ8TCT0 537 aa11.42□□□□□ -0.58
HDAC6-210ENST00000441703 PTPRMP28827 1452 aa11.42□□□□□ -0.58
HDAC6-210ENST00000441703 PCF11O94913 1555 aaKnown RBP11.41□□□□□ -0.58
HDAC6-210ENST00000441703 UHRF1BP1LA0JNW5 1464 aa11.41□□□□□ -0.58
HDAC6-210ENST00000441703 SPATA31D1Q6ZQQ2 1576 aa11.41□□□□□ -0.58
HDAC6-210ENST00000441703 UACAQ9BZF9 1416 aa11.4□□□□□ -0.58
HDAC6-210ENST00000441703 KDM5BQ9UGL1 1544 aa11.35□□□□□ -0.59
HDAC6-210ENST00000441703 ZCCHC11Q5TAX3 1644 aaKnown RBP11.35□□□□□ -0.59
HDAC6-210ENST00000441703 ADAMTSL3P82987 1691 aa11.35□□□□□ -0.59
HDAC6-210ENST00000441703 CD109Q6YHK3 1445 aa11.35□□□□□ -0.59
HDAC6-210ENST00000441703 WDR7Q9Y4E6 1490 aa11.34□□□□□ -0.59
HDAC6-210ENST00000441703 MAGI3Q5TCQ9 1506 aa11.34□□□□□ -0.59
HDAC6-210ENST00000441703 CFAP43Q8NDM7 1665 aa11.33□□□□□ -0.6
HDAC6-210ENST00000441703 ARID4BQ4LE39 1312 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-210ENST00000441703 HSPA2P54652 639 aa11.32□□□□□ -0.6
HDAC6-210ENST00000441703 KCNH8Q96L42 1107 aa11.3□□□□□ -0.6
HDAC6-210ENST00000441703 MADDQ8WXG6 1647 aa11.3□□□□□ -0.6
HDAC6-210ENST00000441703 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
HDAC6-210ENST00000441703 PLPPR3Q6T4P5 718 aa11.29□□□□□ -0.6
HDAC6-210ENST00000441703 BCORL1Q5H9F3 1711 aa11.29□□□□□ -0.6
HDAC6-210ENST00000441703 IGF1RP08069 1367 aa11.27□□□□□ -0.61
HDAC6-210ENST00000441703 RIMS1Q86UR5 1692 aaKnown RBP11.27□□□□□ -0.61
HDAC6-210ENST00000441703 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
HDAC6-210ENST00000441703 ARAP3Q8WWN8 1544 aa11.25□□□□□ -0.61
HDAC6-210ENST00000441703 DISP1Q96F81 1524 aa11.25□□□□□ -0.61
HDAC6-210ENST00000441703 CARMIL1Q5VZK9 1371 aa11.23□□□□□ -0.61
HDAC6-210ENST00000441703 PHLDB1Q86UU1 1377 aa11.2□□□□□ -0.62
HDAC6-210ENST00000441703 RAPGEF3O95398 923 aa11.2□□□□□ -0.62
HDAC6-210ENST00000441703 DMRT2Q9Y5R5 561 aa11.2□□□□□ -0.62
HDAC6-210ENST00000441703 KIAA0556O60303 1618 aa11.19□□□□□ -0.62
HDAC6-210ENST00000441703 POGZQ7Z3K3 1410 aa11.18□□□□□ -0.62
HDAC6-210ENST00000441703 UGGT2Q9NYU1 1516 aa11.17□□□□□ -0.62
HDAC6-210ENST00000441703 SUPT5HO00267 1087 aaKnown RBP11.15□□□□□ -0.62
HDAC6-210ENST00000441703 YEATS2Q9ULM3 1422 aa11.15□□□□□ -0.62
HDAC6-210ENST00000441703 ARHGEF40Q8TER5 1519 aa11.14□□□□□ -0.63
HDAC6-210ENST00000441703 FANCAO15360 1455 aa11.13□□□□□ -0.63
HDAC6-210ENST00000441703 NEO1Q92859 1461 aa11.12□□□□□ -0.63
HDAC6-210ENST00000441703 MLECQ14165 292 aa11.11□□□□□ -0.63
HDAC6-210ENST00000441703 FAM9AQ8IZU1 332 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-210ENST00000441703 ABCA8O94911 1581 aa11.11□□□□□ -0.63
HDAC6-210ENST00000441703 FRMPD1Q5SYB0 1578 aa11.11□□□□□ -0.63
HDAC6-210ENST00000441703 PREX1Q8TCU6 1659 aa11.11□□□□□ -0.63
HDAC6-210ENST00000441703 AKNAQ7Z591 1439 aa11.1□□□□□ -0.63
HDAC6-210ENST00000441703 FER1L4A9Z1Z3 1794 aa11.1□□□□□ -0.63
HDAC6-210ENST00000441703 ARID3CA6NKF2 412 aa11.09□□□□□ -0.63
HDAC6-210ENST00000441703 ABCA9Q8IUA7 1624 aa11.09□□□□□ -0.63
HDAC6-210ENST00000441703 GOLGA3Q08378 1498 aa11.08□□□□□ -0.64
HDAC6-210ENST00000441703 IQSEC2Q5JU85 1478 aa11.08□□□□□ -0.64
HDAC6-210ENST00000441703 TTC37Q6PGP7 1564 aa11.07□□□□□ -0.64
HDAC6-210ENST00000441703 STRCQ7RTU9 1775 aa11.07□□□□□ -0.64
HDAC6-210ENST00000441703 DENND4BO75064 1496 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-210ENST00000441703 PTPRTO14522 1441 aa11.06□□□□□ -0.64
HDAC6-210ENST00000441703 UHRF1BP1Q6BDS2 1440 aa11.06□□□□□ -0.64
HDAC6-210ENST00000441703 RAPGEF2Q9Y4G8 1499 aa11.06□□□□□ -0.64
HDAC6-210ENST00000441703 UBAP1LF5GYI3 381 aa11.04□□□□□ -0.64
HDAC6-210ENST00000441703 CTTNBP2Q8WZ74 1663 aa11.04□□□□□ -0.64
HDAC6-210ENST00000441703 EFCAB5A4FU69 1503 aa11.04□□□□□ -0.64
HDAC6-210ENST00000441703 ZFYVE16Q7Z3T8 1539 aa11.04□□□□□ -0.64
HDAC6-210ENST00000441703 RICTORQ6R327 1708 aa11.02□□□□□ -0.65
HDAC6-210ENST00000441703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-210ENST00000441703 HNRNPUL2Q1KMD3 747 aaKnown RBP11.02□□□□□ -0.65
HDAC6-210ENST00000441703 PHF23Q9BUL5 403 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-210ENST00000441703 LTBP4Q8N2S1 1624 aa11.02□□□□□ -0.65
HDAC6-210ENST00000441703 CEBPAP49715 358 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-210ENST00000441703 FHOD3Q2V2M9 1422 aa11.01□□□□□ -0.65
HDAC6-210ENST00000441703 ATP10BO94823 1461 aa11□□□□□ -0.65
HDAC6-210ENST00000441703 MED1Q15648 1581 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms