RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 APLP2Q06481 763 aa20.34■□□□□ 0.85
CPSF4-206ENST00000441580 MAP3K1Q13233 1512 aa20.32■□□□□ 0.84
CPSF4-206ENST00000441580 SAMD9Q5K651 1589 aa20.31■□□□□ 0.84
CPSF4-206ENST00000441580 CFAP43Q8NDM7 1665 aa20.29■□□□□ 0.84
CPSF4-206ENST00000441580 RANGAP1P46060 587 aaPredicted RBP20.29■□□□□ 0.84
CPSF4-206ENST00000441580 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
CPSF4-206ENST00000441580 PCF11O94913 1555 aaKnown RBP20.26■□□□□ 0.83
CPSF4-206ENST00000441580 AQRO60306 1485 aaKnown RBP eCLIP20.26■□□□□ 0.832e-7■■■■■ 81.6
CPSF4-206ENST00000441580 TIAM1Q13009 1591 aa20.25■□□□□ 0.83
CPSF4-206ENST00000441580 FYCO1Q9BQS8 1478 aa20.24■□□□□ 0.83
CPSF4-206ENST00000441580 ZNF608Q9ULD9 1512 aaPredicted RBP20.24■□□□□ 0.83
CPSF4-206ENST00000441580 MAGI1Q96QZ7 1491 aaPredicted RBP20.23■□□□□ 0.83
CPSF4-206ENST00000441580 IQGAP2Q13576 1575 aa20.22■□□□□ 0.83
CPSF4-206ENST00000441580 FMN1Q68DA7 1419 aa20.2■□□□□ 0.82
CPSF4-206ENST00000441580 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
CPSF4-206ENST00000441580 FHOD3Q2V2M9 1422 aa20.18■□□□□ 0.82
CPSF4-206ENST00000441580 ZEB1P37275 1124 aaPredicted RBP20.16■□□□□ 0.82
CPSF4-206ENST00000441580 CASKIN1Q8WXD9 1431 aa20.16■□□□□ 0.82
CPSF4-206ENST00000441580 TTBK1Q5TCY1 1321 aaPredicted RBP20.15■□□□□ 0.82
CPSF4-206ENST00000441580 GRIN2AQ12879 1464 aa20.13■□□□□ 0.81
CPSF4-206ENST00000441580 UGGT2Q9NYU1 1516 aa20.12■□□□□ 0.81
CPSF4-206ENST00000441580 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
CPSF4-206ENST00000441580 LRRC9Q6ZRR7 1453 aa20.08■□□□□ 0.81
CPSF4-206ENST00000441580 RRBP1Q9P2E9 1410 aaKnown RBP20.08■□□□□ 0.8
CPSF4-206ENST00000441580 KIAA0586Q9BVV6 1533 aa20.07■□□□□ 0.8
CPSF4-206ENST00000441580 HECW1Q76N89 1606 aa20.05■□□□□ 0.8
CPSF4-206ENST00000441580 KIAA0556O60303 1618 aa20.03■□□□□ 0.8
CPSF4-206ENST00000441580 CCDC18Q5T9S5 1454 aa20.01■□□□□ 0.79
CPSF4-206ENST00000441580 CEP170Q5SW79 1584 aa20■□□□□ 0.79
CPSF4-206ENST00000441580 KANK4Q5T7N3 995 aaPredicted RBP19.99■□□□□ 0.79
CPSF4-206ENST00000441580 NUP160Q12769 1436 aa19.98■□□□□ 0.79
CPSF4-206ENST00000441580 EHBP1L1Q8N3D4 1523 aa19.97■□□□□ 0.79
CPSF4-206ENST00000441580 LRRIQ1Q96JM4 1722 aa19.96■□□□□ 0.79
CPSF4-206ENST00000441580 P3H3Q8IVL6 736 aa19.95■□□□□ 0.78
CPSF4-206ENST00000441580 CCNB3Q8WWL7 1395 aa19.95■□□□□ 0.78
CPSF4-206ENST00000441580 DISP1Q96F81 1524 aa19.92■□□□□ 0.78
CPSF4-206ENST00000441580 SUPT6HQ7KZ85 1726 aaKnown RBP19.9■□□□□ 0.78
CPSF4-206ENST00000441580 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
CPSF4-206ENST00000441580 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
CPSF4-206ENST00000441580 RAPGEF6Q8TEU7 1601 aa19.85■□□□□ 0.77
CPSF4-206ENST00000441580 MTUS2Q5JR59 1369 aa19.84■□□□□ 0.77
CPSF4-206ENST00000441580 CHD1O14646 1710 aa19.84■□□□□ 0.77
CPSF4-206ENST00000441580 PHLDB1Q86UU1 1377 aa19.83■□□□□ 0.77
CPSF4-206ENST00000441580 EPRSP07814 1512 aaKnown RBP19.83■□□□□ 0.77
CPSF4-206ENST00000441580 CARMIL2Q6F5E8 1435 aa19.83■□□□□ 0.76
CPSF4-206ENST00000441580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.83■□□□□ 0.76
CPSF4-206ENST00000441580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.82■□□□□ 0.76
CPSF4-206ENST00000441580 HNRNPUL2Q1KMD3 747 aaKnown RBP19.81■□□□□ 0.76
CPSF4-206ENST00000441580 ATP1B4Q9UN42 357 aaPredicted RBP19.8■□□□□ 0.76
CPSF4-206ENST00000441580 ARHGEF11O15085 1522 aa19.8■□□□□ 0.76
CPSF4-206ENST00000441580 NCOA2Q15596 1464 aa19.78■□□□□ 0.76
CPSF4-206ENST00000441580 FGD6Q6ZV73 1430 aa19.76■□□□□ 0.75
CPSF4-206ENST00000441580 MAGI3Q5TCQ9 1506 aa19.75■□□□□ 0.75
CPSF4-206ENST00000441580 MYOM3Q5VTT5 1437 aa19.75■□□□□ 0.75
CPSF4-206ENST00000441580 CDK13Q14004 1512 aaKnown RBP19.74■□□□□ 0.75
CPSF4-206ENST00000441580 NUP153P49790 1475 aaKnown RBP19.73■□□□□ 0.75
CPSF4-206ENST00000441580 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
CPSF4-206ENST00000441580 FBLN2P98095 1184 aa19.71■□□□□ 0.75
CPSF4-206ENST00000441580 ABCA8O94911 1581 aa19.68■□□□□ 0.74
CPSF4-206ENST00000441580 CLSPNQ9HAW4 1339 aa19.68■□□□□ 0.74
CPSF4-206ENST00000441580 ADCY10Q96PN6 1610 aa19.68■□□□□ 0.74
CPSF4-206ENST00000441580 PTPN23Q9H3S7 1636 aa19.68■□□□□ 0.74
CPSF4-206ENST00000441580 TCOF1Q13428 1488 aaKnown RBP19.67■□□□□ 0.74
CPSF4-206ENST00000441580 JPH4Q96JJ6 628 aa19.64■□□□□ 0.73
CPSF4-206ENST00000441580 ITSN2Q9NZM3 1697 aa19.63■□□□□ 0.73
CPSF4-206ENST00000441580 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
CPSF4-206ENST00000441580 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
CPSF4-206ENST00000441580 PLB1Q6P1J6 1458 aa19.61■□□□□ 0.73
CPSF4-206ENST00000441580 DHX57Q6P158 1386 aaKnown RBP19.6■□□□□ 0.73
CPSF4-206ENST00000441580 FAM50AQ14320 339 aaKnown RBP19.6■□□□□ 0.73
CPSF4-206ENST00000441580 TROQ12816 1431 aaPredicted RBP19.59■□□□□ 0.73
CPSF4-206ENST00000441580 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
CPSF4-206ENST00000441580 SETD5Q9C0A6 1442 aa19.59■□□□□ 0.73
CPSF4-206ENST00000441580 CDK11AQ9UQ88 783 aaPredicted RBP19.58■□□□□ 0.72
CPSF4-206ENST00000441580 RAB3GAP2Q9H2M9 1393 aa19.57■□□□□ 0.72
CPSF4-206ENST00000441580 KIF14Q15058 1648 aa19.55■□□□□ 0.72
CPSF4-206ENST00000441580 AKNAQ7Z591 1439 aa19.55■□□□□ 0.72
CPSF4-206ENST00000441580 GCC2Q8IWJ2 1684 aa19.55■□□□□ 0.72
CPSF4-206ENST00000441580 HFM1A2PYH4 1435 aa19.52■□□□□ 0.72
CPSF4-206ENST00000441580 ITGAEP38570 1179 aa19.52■□□□□ 0.72
CPSF4-206ENST00000441580 PTPRGP23470 1445 aa19.51■□□□□ 0.71
CPSF4-206ENST00000441580 DNMT1P26358 1616 aaKnown RBP19.49■□□□□ 0.71
CPSF4-206ENST00000441580 ABCC2Q92887 1545 aa19.46■□□□□ 0.71
CPSF4-206ENST00000441580 MAPKBP1O60336 1514 aa19.45■□□□□ 0.7
CPSF4-206ENST00000441580 UACAQ9BZF9 1416 aa19.44■□□□□ 0.7
CPSF4-206ENST00000441580 ATP10BO94823 1461 aa19.44■□□□□ 0.7
CPSF4-206ENST00000441580 CROCC2H7BZ55 1655 aa19.43■□□□□ 0.7
CPSF4-206ENST00000441580 PTPRKQ15262 1439 aa19.42■□□□□ 0.7
CPSF4-206ENST00000441580 ADGBQ8N7X0 1667 aa19.41■□□□□ 0.7
CPSF4-206ENST00000441580 ARID3CA6NKF2 412 aa19.41■□□□□ 0.7
CPSF4-206ENST00000441580 NAIPQ13075 1403 aa19.41■□□□□ 0.7
CPSF4-206ENST00000441580 CAMSAP2Q08AD1 1489 aa19.41■□□□□ 0.7
CPSF4-206ENST00000441580 CDC42BPAQ5VT25 1732 aa19.4■□□□□ 0.7
CPSF4-206ENST00000441580 ABCC10Q5T3U5 1492 aa19.4■□□□□ 0.7
CPSF4-206ENST00000441580 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
CPSF4-206ENST00000441580 DAPK1P53355 1430 aa19.39■□□□□ 0.69
CPSF4-206ENST00000441580 UHRF1BP1LA0JNW5 1464 aa19.39■□□□□ 0.69
CPSF4-206ENST00000441580 ROCK1Q13464 1354 aa19.38■□□□□ 0.69
CPSF4-206ENST00000441580 GPATCH8Q9UKJ3 1502 aaKnown RBP19.38■□□□□ 0.69
CPSF4-206ENST00000441580 PREX2Q70Z35 1606 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms