RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 NUP160Q12769 1436 aa34.03■■■■□ 3.04
VPS13B-204ENST00000441350 CEP170Q5SW79 1584 aa34.01■■■■□ 3.04
VPS13B-204ENST00000441350 KIAA0586Q9BVV6 1533 aa33.94■■■■□ 3.02
VPS13B-204ENST00000441350 CEP162Q5TB80 1403 aa33.91■■■■□ 3.02
VPS13B-204ENST00000441350 IQGAP2Q13576 1575 aa33.89■■■■□ 3.02
VPS13B-204ENST00000441350 CLIP1P30622 1438 aa33.82■■■■□ 3.01
VPS13B-204ENST00000441350 RANGAP1P46060 587 aaPredicted RBP33.79■■■■□ 3
VPS13B-204ENST00000441350 CLASP1Q7Z460 1538 aa33.76■■■■□ 3
VPS13B-204ENST00000441350 UGGT2Q9NYU1 1516 aa33.76■■■□□ 2.99
VPS13B-204ENST00000441350 ARHGAP35Q9NRY4 1499 aa33.72■■■□□ 2.99
VPS13B-204ENST00000441350 OSCARQ8IYS5 282 aa33.71■■■□□ 2.99
VPS13B-204ENST00000441350 EFCAB5A4FU69 1503 aa33.7■■■□□ 2.99
VPS13B-204ENST00000441350 JPH4Q96JJ6 628 aa33.69■■■□□ 2.98
VPS13B-204ENST00000441350 SAMD9Q5K651 1589 aa33.68■■■□□ 2.98
VPS13B-204ENST00000441350 SHROOM2Q13796 1616 aa33.66■■■□□ 2.98
VPS13B-204ENST00000441350 DISP1Q96F81 1524 aa33.61■■■□□ 2.97
VPS13B-204ENST00000441350 ARAP1Q96P48 1450 aa33.6■■■□□ 2.97
VPS13B-204ENST00000441350 KIAA0556O60303 1618 aa33.56■■■□□ 2.96
VPS13B-204ENST00000441350 P3H3Q8IVL6 736 aa33.54■■■□□ 2.96
VPS13B-204ENST00000441350 PRG4Q92954 1404 aaPredicted RBP33.53■■■□□ 2.96
VPS13B-204ENST00000441350 FHOD3Q2V2M9 1422 aa33.52■■■□□ 2.96
VPS13B-204ENST00000441350 CARMIL2Q6F5E8 1435 aa33.51■■■□□ 2.96
VPS13B-204ENST00000441350 VPS8Q8N3P4 1428 aa33.44■■■□□ 2.94
VPS13B-204ENST00000441350 ERCC6L2Q5T890 1561 aa33.42■■■□□ 2.94
VPS13B-204ENST00000441350 FMN1Q68DA7 1419 aa33.37■■■□□ 2.93
VPS13B-204ENST00000441350 PTPRGP23470 1445 aa33.25■■■□□ 2.91
VPS13B-204ENST00000441350 CASKIN1Q8WXD9 1431 aa33.24■■■□□ 2.91
VPS13B-204ENST00000441350 PCF11O94913 1555 aaKnown RBP33.24■■■□□ 2.91
VPS13B-204ENST00000441350 TTBK1Q5TCY1 1321 aaPredicted RBP33.22■■■□□ 2.91
VPS13B-204ENST00000441350 FYCO1Q9BQS8 1478 aa33.21■■■□□ 2.91
VPS13B-204ENST00000441350 ARHGEF11O15085 1522 aa33.17■■■□□ 2.9
VPS13B-204ENST00000441350 RAPGEF6Q8TEU7 1601 aa33.15■■■□□ 2.9
VPS13B-204ENST00000441350 PLB1Q6P1J6 1458 aa33.14■■■□□ 2.9
VPS13B-204ENST00000441350 ABCA8O94911 1581 aa33.14■■■□□ 2.9
VPS13B-204ENST00000441350 HECW1Q76N89 1606 aa33.1■■■□□ 2.89
VPS13B-204ENST00000441350 UACAQ9BZF9 1416 aa33.07■■■□□ 2.88
VPS13B-204ENST00000441350 RIMBP3CA6NJZ7 1639 aa33.07■■■□□ 2.88
VPS13B-204ENST00000441350 RIMBP3BA6NNM3 1639 aa33.07■■■□□ 2.88
VPS13B-204ENST00000441350 RIMBP3Q9UFD9 1639 aa33.07■■■□□ 2.88
VPS13B-204ENST00000441350 ATP1B4Q9UN42 357 aaPredicted RBP33.06■■■□□ 2.88
VPS13B-204ENST00000441350 NUP153P49790 1475 aaKnown RBP33.06■■■□□ 2.88
VPS13B-204ENST00000441350 LRRIQ1Q96JM4 1722 aa33.04■■■□□ 2.88
VPS13B-204ENST00000441350 MAP3K1Q13233 1512 aa33.03■■■□□ 2.88
VPS13B-204ENST00000441350 APLP2Q06481 763 aa33.01■■■□□ 2.87
VPS13B-204ENST00000441350 EPRSP07814 1512 aaKnown RBP33■■■□□ 2.87
VPS13B-204ENST00000441350 ABCC2Q92887 1545 aa33■■■□□ 2.87
VPS13B-204ENST00000441350 UHRF1BP1LA0JNW5 1464 aa32.99■■■□□ 2.87
VPS13B-204ENST00000441350 TIAM1Q13009 1591 aa32.98■■■□□ 2.87
VPS13B-204ENST00000441350 CCDC18Q5T9S5 1454 aa32.98■■■□□ 2.87
VPS13B-204ENST00000441350 CFAP43Q8NDM7 1665 aa32.97■■■□□ 2.87
VPS13B-204ENST00000441350 CDK13Q14004 1512 aaKnown RBP32.91■■■□□ 2.86
VPS13B-204ENST00000441350 ADCY10Q96PN6 1610 aa32.9■■■□□ 2.86
VPS13B-204ENST00000441350 ATP10BO94823 1461 aa32.89■■■□□ 2.86
VPS13B-204ENST00000441350 ARID3CA6NKF2 412 aa32.88■■■□□ 2.85
VPS13B-204ENST00000441350 KANK4Q5T7N3 995 aaPredicted RBP32.86■■■□□ 2.85
VPS13B-204ENST00000441350 PPARGC1BQ86YN6 1023 aaKnown RBP32.84■■■□□ 2.85
VPS13B-204ENST00000441350 LRRC9Q6ZRR7 1453 aa32.83■■■□□ 2.85
VPS13B-204ENST00000441350 KDM5BQ9UGL1 1544 aa32.83■■■□□ 2.85
VPS13B-204ENST00000441350 CYB5RLQ6IPT4 315 aa32.81■■■□□ 2.84
VPS13B-204ENST00000441350 MAGI3Q5TCQ9 1506 aa32.77■■■□□ 2.84
VPS13B-204ENST00000441350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.77■■■□□ 2.84
VPS13B-204ENST00000441350 HNRNPUL2Q1KMD3 747 aaKnown RBP32.77■■■□□ 2.84
VPS13B-204ENST00000441350 ZCCHC11Q5TAX3 1644 aaKnown RBP32.76■■■□□ 2.84
VPS13B-204ENST00000441350 DNAJC5Q9H3Z4 198 aa32.74■■■□□ 2.83
VPS13B-204ENST00000441350 CDK11AQ9UQ88 783 aaPredicted RBP32.74■■■□□ 2.83
VPS13B-204ENST00000441350 MTUS2Q5JR59 1369 aa32.73■■■□□ 2.83
VPS13B-204ENST00000441350 EHBP1L1Q8N3D4 1523 aa32.71■■■□□ 2.83
VPS13B-204ENST00000441350 TROQ12816 1431 aaPredicted RBP32.67■■■□□ 2.82
VPS13B-204ENST00000441350 PLEKHD1A6NEE1 506 aa32.66■■■□□ 2.82
VPS13B-204ENST00000441350 NPM1P06748 294 aaKnown RBP eCLIP32.62■■■□□ 2.81
VPS13B-204ENST00000441350 SUPT6HQ7KZ85 1726 aaKnown RBP32.59■■■□□ 2.81
VPS13B-204ENST00000441350 NCOA2Q15596 1464 aa32.55■■■□□ 2.8
VPS13B-204ENST00000441350 ASXL2Q76L83 1435 aa32.52■■■□□ 2.8
VPS13B-204ENST00000441350 KIF14Q15058 1648 aa32.52■■■□□ 2.8
VPS13B-204ENST00000441350 WDR7Q9Y4E6 1490 aa32.51■■■□□ 2.8
VPS13B-204ENST00000441350 MAPKBP1O60336 1514 aa32.48■■■□□ 2.79
VPS13B-204ENST00000441350 PHLDB1Q86UU1 1377 aa32.48■■■□□ 2.79
VPS13B-204ENST00000441350 ABCC10Q5T3U5 1492 aa32.44■■■□□ 2.78
VPS13B-204ENST00000441350 KCNH8Q96L42 1107 aa32.4■■■□□ 2.78
VPS13B-204ENST00000441350 MYOM3Q5VTT5 1437 aa32.38■■■□□ 2.77
VPS13B-204ENST00000441350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.38■■■□□ 2.77
VPS13B-204ENST00000441350 CCNB3Q8WWL7 1395 aa32.36■■■□□ 2.77
VPS13B-204ENST00000441350 TRIM26Q12899 539 aaPredicted RBP32.36■■■□□ 2.77
VPS13B-204ENST00000441350 TTC37Q6PGP7 1564 aa32.34■■■□□ 2.77
VPS13B-204ENST00000441350 RRBP1Q9P2E9 1410 aaKnown RBP32.34■■■□□ 2.77
VPS13B-204ENST00000441350 GPATCH8Q9UKJ3 1502 aaKnown RBP32.33■■■□□ 2.77
VPS13B-204ENST00000441350 FGD6Q6ZV73 1430 aa32.31■■■□□ 2.76
VPS13B-204ENST00000441350 CDC42BPAQ5VT25 1732 aa32.3■■■□□ 2.76
VPS13B-204ENST00000441350 ABCA9Q8IUA7 1624 aa32.3■■■□□ 2.76
VPS13B-204ENST00000441350 ITSN2Q9NZM3 1697 aa32.29■■■□□ 2.76
VPS13B-204ENST00000441350 MIA2Q96PC5 1412 aa32.28■■■□□ 2.76
VPS13B-204ENST00000441350 MYO5CQ9NQX4 1742 aa32.24■■■□□ 2.75
VPS13B-204ENST00000441350 PREX2Q70Z35 1606 aa32.23■■■□□ 2.75
VPS13B-204ENST00000441350 CDC42BPBQ9Y5S2 1711 aa32.21■■■□□ 2.75
VPS13B-204ENST00000441350 GLI2P10070 1586 aa32.2■■■□□ 2.75
VPS13B-204ENST00000441350 CFDP1Q9UEE9 299 aaPredicted RBP32.2■■■□□ 2.75
VPS13B-204ENST00000441350 PTPN23Q9H3S7 1636 aa32.2■■■□□ 2.74
VPS13B-204ENST00000441350 PLCH2O75038 1416 aa32.19■■■□□ 2.74
VPS13B-204ENST00000441350 DIP2BQ9P265 1576 aa32.18■■■□□ 2.74
VPS13B-204ENST00000441350 TCOF1Q13428 1488 aaKnown RBP32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms