RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
UBE2D4-204ENST00000440899 KIAA0586Q9BVV6 1533 aa20.2■□□□□ 0.82
UBE2D4-204ENST00000440899 CUL7Q14999 1698 aa20.18■□□□□ 0.82
UBE2D4-204ENST00000440899 CARMIL1Q5VZK9 1371 aa20.16■□□□□ 0.82
UBE2D4-204ENST00000440899 NPM1P06748 294 aaKnown RBP eCLIP20.15■□□□□ 0.82
UBE2D4-204ENST00000440899 FAM69CQ0P6D2 419 aa20.05■□□□□ 0.8
UBE2D4-204ENST00000440899 PTPRGP23470 1445 aa20.03■□□□□ 0.8
UBE2D4-204ENST00000440899 ADCY10Q96PN6 1610 aa20.03■□□□□ 0.8
UBE2D4-204ENST00000440899 KIF13AQ9H1H9 1805 aa20.03■□□□□ 0.8
UBE2D4-204ENST00000440899 ABCC10Q5T3U5 1492 aa20.03■□□□□ 0.8
UBE2D4-204ENST00000440899 CARMIL2Q6F5E8 1435 aa20.02■□□□□ 0.8
UBE2D4-204ENST00000440899 MAPKBP1O60336 1514 aa20.02■□□□□ 0.8
UBE2D4-204ENST00000440899 AEBP2Q6ZN18 517 aaPredicted RBP20.02■□□□□ 0.8
UBE2D4-204ENST00000440899 TNIKQ9UKE5 1360 aa19.99■□□□□ 0.79
UBE2D4-204ENST00000440899 IQGAP2Q13576 1575 aa19.97■□□□□ 0.79
UBE2D4-204ENST00000440899 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
UBE2D4-204ENST00000440899 RAPGEF2Q9Y4G8 1499 aa19.96■□□□□ 0.79
UBE2D4-204ENST00000440899 DIP2BQ9P265 1576 aa19.94■□□□□ 0.78
UBE2D4-204ENST00000440899 ABCC2Q92887 1545 aa19.89■□□□□ 0.77
UBE2D4-204ENST00000440899 DISP1Q96F81 1524 aa19.89■□□□□ 0.77
UBE2D4-204ENST00000440899 UACAQ9BZF9 1416 aa19.86■□□□□ 0.77
UBE2D4-204ENST00000440899 UGGT2Q9NYU1 1516 aa19.86■□□□□ 0.77
UBE2D4-204ENST00000440899 UHRF1BP1LA0JNW5 1464 aa19.86■□□□□ 0.77
UBE2D4-204ENST00000440899 PLB1Q6P1J6 1458 aa19.83■□□□□ 0.76
UBE2D4-204ENST00000440899 ASXL2Q76L83 1435 aa19.83■□□□□ 0.76
UBE2D4-204ENST00000440899 KIAA0556O60303 1618 aa19.77■□□□□ 0.76
UBE2D4-204ENST00000440899 KDM5BQ9UGL1 1544 aa19.76■□□□□ 0.75
UBE2D4-204ENST00000440899 KDM6BO15054 1643 aa19.76■□□□□ 0.75
UBE2D4-204ENST00000440899 TSPOAP1O95153 1857 aa19.76■□□□□ 0.75
UBE2D4-204ENST00000440899 PRXQ9BXM0 1461 aa19.75■□□□□ 0.75
UBE2D4-204ENST00000440899 GLI2P10070 1586 aa19.74■□□□□ 0.75
UBE2D4-204ENST00000440899 GOLGA3Q08378 1498 aa19.73■□□□□ 0.75
UBE2D4-204ENST00000440899 CTTNBP2Q8WZ74 1663 aa19.7■□□□□ 0.74
UBE2D4-204ENST00000440899 EPRSP07814 1512 aaKnown RBP19.69■□□□□ 0.74
UBE2D4-204ENST00000440899 ZCCHC11Q5TAX3 1644 aaKnown RBP19.67■□□□□ 0.74
UBE2D4-204ENST00000440899 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
UBE2D4-204ENST00000440899 FAM9AQ8IZU1 332 aaPredicted RBP19.64■□□□□ 0.73
UBE2D4-204ENST00000440899 PPRC1Q5VV67 1664 aaKnown RBP19.63■□□□□ 0.73
UBE2D4-204ENST00000440899 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
UBE2D4-204ENST00000440899 KDM4FA0A1W2PPD8 638 aa19.61■□□□□ 0.73
UBE2D4-204ENST00000440899 ABCA8O94911 1581 aa19.61■□□□□ 0.73
UBE2D4-204ENST00000440899 TEX14Q8IWB6 1497 aa19.6■□□□□ 0.73
UBE2D4-204ENST00000440899 MAP3K4Q9Y6R4 1608 aa19.6■□□□□ 0.73
UBE2D4-204ENST00000440899 COL17A1Q9UMD9 1497 aaPredicted RBP19.57■□□□□ 0.72
UBE2D4-204ENST00000440899 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
UBE2D4-204ENST00000440899 KCNH8Q96L42 1107 aa19.57■□□□□ 0.72
UBE2D4-204ENST00000440899 EEA1Q15075 1411 aa19.55■□□□□ 0.72
UBE2D4-204ENST00000440899 CD109Q6YHK3 1445 aa19.53■□□□□ 0.72
UBE2D4-204ENST00000440899 MAGI3Q5TCQ9 1506 aa19.5■□□□□ 0.71
UBE2D4-204ENST00000440899 ATP10BO94823 1461 aa19.48■□□□□ 0.71
UBE2D4-204ENST00000440899 ARID3CA6NKF2 412 aa19.48■□□□□ 0.71
UBE2D4-204ENST00000440899 CFAP43Q8NDM7 1665 aa19.47■□□□□ 0.71
UBE2D4-204ENST00000440899 SAMD9Q5K651 1589 aa19.46■□□□□ 0.71
UBE2D4-204ENST00000440899 ADGRL1O94910 1474 aa19.42■□□□□ 0.7
UBE2D4-204ENST00000440899 RANGAP1P46060 587 aaPredicted RBP19.42■□□□□ 0.7
UBE2D4-204ENST00000440899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.4■□□□□ 0.7
UBE2D4-204ENST00000440899 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
UBE2D4-204ENST00000440899 RAPGEF6Q8TEU7 1601 aa19.39■□□□□ 0.69
UBE2D4-204ENST00000440899 FHOD3Q2V2M9 1422 aa19.36■□□□□ 0.69
UBE2D4-204ENST00000440899 PHLDB1Q86UU1 1377 aa19.36■□□□□ 0.69
UBE2D4-204ENST00000440899 ARAP3Q8WWN8 1544 aa19.35■□□□□ 0.69
UBE2D4-204ENST00000440899 NUP153P49790 1475 aaKnown RBP19.35■□□□□ 0.69
UBE2D4-204ENST00000440899 ABCA9Q8IUA7 1624 aa19.33■□□□□ 0.69
UBE2D4-204ENST00000440899 KIF21BO75037 1637 aa19.33■□□□□ 0.68
UBE2D4-204ENST00000440899 PLEKHD1A6NEE1 506 aa19.31■□□□□ 0.68
UBE2D4-204ENST00000440899 EFCAB5A4FU69 1503 aa19.3■□□□□ 0.68
UBE2D4-204ENST00000440899 CHIC1Q5VXU3 224 aa19.29■□□□□ 0.68
UBE2D4-204ENST00000440899 NEO1Q92859 1461 aa19.28■□□□□ 0.68
UBE2D4-204ENST00000440899 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.68
UBE2D4-204ENST00000440899 RAPGEF3O95398 923 aa19.26■□□□□ 0.67
UBE2D4-204ENST00000440899 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
UBE2D4-204ENST00000440899 FMN1Q68DA7 1419 aa19.17■□□□□ 0.66
UBE2D4-204ENST00000440899 ATP1B4Q9UN42 357 aaPredicted RBP19.16■□□□□ 0.66
UBE2D4-204ENST00000440899 AKNAQ7Z591 1439 aa19.16■□□□□ 0.66
UBE2D4-204ENST00000440899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.15■□□□□ 0.66
UBE2D4-204ENST00000440899 FANCAO15360 1455 aa19.15■□□□□ 0.66
UBE2D4-204ENST00000440899 DENND4BO75064 1496 aaPredicted RBP19.15■□□□□ 0.66
UBE2D4-204ENST00000440899 CDK13Q14004 1512 aaKnown RBP19.14■□□□□ 0.65
UBE2D4-204ENST00000440899 CDK11AQ9UQ88 783 aaPredicted RBP19.13■□□□□ 0.65
UBE2D4-204ENST00000440899 ARHGAP35Q9NRY4 1499 aa19.13■□□□□ 0.65
UBE2D4-204ENST00000440899 HECW2Q9P2P5 1572 aa19.13■□□□□ 0.65
UBE2D4-204ENST00000440899 FRMPD1Q5SYB0 1578 aa19.12■□□□□ 0.65
UBE2D4-204ENST00000440899 ARID4BQ4LE39 1312 aaPredicted RBP19.11■□□□□ 0.65
UBE2D4-204ENST00000440899 TTC37Q6PGP7 1564 aa19.1■□□□□ 0.65
UBE2D4-204ENST00000440899 CFAP74Q9C0B2 1584 aa19.1■□□□□ 0.65
UBE2D4-204ENST00000440899 PLCH2O75038 1416 aa19.08■□□□□ 0.64
UBE2D4-204ENST00000440899 HECW1Q76N89 1606 aa19.07■□□□□ 0.64
UBE2D4-204ENST00000440899 ADAMTSL3P82987 1691 aa19.06■□□□□ 0.64
UBE2D4-204ENST00000440899 PTPRMP28827 1452 aa19.06■□□□□ 0.64
UBE2D4-204ENST00000440899 EFCAB2Q5VUJ9 269 aa19.05■□□□□ 0.64
UBE2D4-204ENST00000440899 RICTORQ6R327 1708 aa19.05■□□□□ 0.64
UBE2D4-204ENST00000440899 ARHGEF40Q8TER5 1519 aa19.05■□□□□ 0.64
UBE2D4-204ENST00000440899 SCAPERQ9BY12 1400 aa19.03■□□□□ 0.64
UBE2D4-204ENST00000440899 MAGI2Q86UL8 1455 aa19.03■□□□□ 0.64
UBE2D4-204ENST00000440899 BCORL1Q5H9F3 1711 aa19.03■□□□□ 0.64
UBE2D4-204ENST00000440899 ZMYM4Q5VZL5 1548 aa19.02■□□□□ 0.64
UBE2D4-204ENST00000440899 TROQ12816 1431 aaPredicted RBP19■□□□□ 0.63
UBE2D4-204ENST00000440899 ILDR1Q86SU0 546 aaPredicted RBP19■□□□□ 0.63
UBE2D4-204ENST00000440899 ZFYVE16Q7Z3T8 1539 aa18.99■□□□□ 0.63
UBE2D4-204ENST00000440899 CLIP1P30622 1438 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms