RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 KIF13AQ9H1H9 1805 aa10.56□□□□□ -0.72
PTPRR-204ENST00000440835 KIAA0586Q9BVV6 1533 aa10.55□□□□□ -0.72
PTPRR-204ENST00000440835 JPH4Q96JJ6 628 aa10.54□□□□□ -0.72
PTPRR-204ENST00000440835 KIF27Q86VH2 1401 aa10.54□□□□□ -0.72
PTPRR-204ENST00000440835 ABCC10Q5T3U5 1492 aa10.51□□□□□ -0.73
PTPRR-204ENST00000440835 AEBP2Q6ZN18 517 aaPredicted RBP10.51□□□□□ -0.73
PTPRR-204ENST00000440835 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTPRR-204ENST00000440835 IGF1RP08069 1367 aa10.49□□□□□ -0.73
PTPRR-204ENST00000440835 DIP2BQ9P265 1576 aa10.48□□□□□ -0.73
PTPRR-204ENST00000440835 ADCY10Q96PN6 1610 aa10.48□□□□□ -0.73
PTPRR-204ENST00000440835 CARMIL2Q6F5E8 1435 aa10.46□□□□□ -0.74
PTPRR-204ENST00000440835 UHRF1BP1LA0JNW5 1464 aa10.44□□□□□ -0.74
PTPRR-204ENST00000440835 GLI2P10070 1586 aa10.43□□□□□ -0.74
PTPRR-204ENST00000440835 CARMIL1Q5VZK9 1371 aa10.43□□□□□ -0.74
PTPRR-204ENST00000440835 IQGAP2Q13576 1575 aa10.43□□□□□ -0.74
PTPRR-204ENST00000440835 TNIKQ9UKE5 1360 aa10.42□□□□□ -0.74
PTPRR-204ENST00000440835 PLB1Q6P1J6 1458 aa10.41□□□□□ -0.74
PTPRR-204ENST00000440835 PTPRGP23470 1445 aa10.41□□□□□ -0.74
PTPRR-204ENST00000440835 FAM69CQ0P6D2 419 aa10.41□□□□□ -0.74
PTPRR-204ENST00000440835 ABCC2Q92887 1545 aa10.41□□□□□ -0.74
PTPRR-204ENST00000440835 KDM6BO15054 1643 aa10.4□□□□□ -0.74
PTPRR-204ENST00000440835 UGGT2Q9NYU1 1516 aa10.39□□□□□ -0.75
PTPRR-204ENST00000440835 RAPGEF2Q9Y4G8 1499 aa10.36□□□□□ -0.75
PTPRR-204ENST00000440835 UACAQ9BZF9 1416 aa10.35□□□□□ -0.75
PTPRR-204ENST00000440835 KDM5BQ9UGL1 1544 aa10.35□□□□□ -0.75
PTPRR-204ENST00000440835 DISP1Q96F81 1524 aa10.34□□□□□ -0.75
PTPRR-204ENST00000440835 TEX14Q8IWB6 1497 aa10.33□□□□□ -0.76
PTPRR-204ENST00000440835 CTTNBP2Q8WZ74 1663 aa10.33□□□□□ -0.76
PTPRR-204ENST00000440835 GOLGA3Q08378 1498 aa10.33□□□□□ -0.76
PTPRR-204ENST00000440835 KIAA0556O60303 1618 aa10.33□□□□□ -0.76
PTPRR-204ENST00000440835 ASXL2Q76L83 1435 aa10.33□□□□□ -0.76
PTPRR-204ENST00000440835 MAP3K4Q9Y6R4 1608 aa10.32□□□□□ -0.76
PTPRR-204ENST00000440835 TSPOAP1O95153 1857 aa10.32□□□□□ -0.76
PTPRR-204ENST00000440835 PPRC1Q5VV67 1664 aaKnown RBP10.32□□□□□ -0.76
PTPRR-204ENST00000440835 ZCCHC11Q5TAX3 1644 aaKnown RBP10.29□□□□□ -0.76
PTPRR-204ENST00000440835 EPRSP07814 1512 aaKnown RBP10.29□□□□□ -0.76
PTPRR-204ENST00000440835 CFAP43Q8NDM7 1665 aa10.28□□□□□ -0.76
PTPRR-204ENST00000440835 WDR7Q9Y4E6 1490 aa10.26□□□□□ -0.77
PTPRR-204ENST00000440835 FAM9AQ8IZU1 332 aaPredicted RBP10.25□□□□□ -0.77
PTPRR-204ENST00000440835 ABCA8O94911 1581 aa10.25□□□□□ -0.77
PTPRR-204ENST00000440835 MAGI3Q5TCQ9 1506 aa10.24□□□□□ -0.77
PTPRR-204ENST00000440835 PRXQ9BXM0 1461 aa10.24□□□□□ -0.77
PTPRR-204ENST00000440835 PHLDB1Q86UU1 1377 aa10.22□□□□□ -0.77
PTPRR-204ENST00000440835 KDM4FA0A1W2PPD8 638 aa10.22□□□□□ -0.77
PTPRR-204ENST00000440835 CHIC1Q5VXU3 224 aa10.21□□□□□ -0.78
PTPRR-204ENST00000440835 ADGRL1O94910 1474 aa10.19□□□□□ -0.78
PTPRR-204ENST00000440835 EEA1Q15075 1411 aa10.18□□□□□ -0.78
PTPRR-204ENST00000440835 ARAP3Q8WWN8 1544 aa10.17□□□□□ -0.78
PTPRR-204ENST00000440835 CD109Q6YHK3 1445 aa10.17□□□□□ -0.78
PTPRR-204ENST00000440835 SAMD9Q5K651 1589 aa10.16□□□□□ -0.78
PTPRR-204ENST00000440835 COL17A1Q9UMD9 1497 aaPredicted RBP10.16□□□□□ -0.78
PTPRR-204ENST00000440835 ABCA9Q8IUA7 1624 aa10.15□□□□□ -0.78
PTPRR-204ENST00000440835 TTBK1Q5TCY1 1321 aaPredicted RBP10.14□□□□□ -0.79
PTPRR-204ENST00000440835 NEO1Q92859 1461 aa10.12□□□□□ -0.79
PTPRR-204ENST00000440835 RAPGEF6Q8TEU7 1601 aa10.12□□□□□ -0.79
PTPRR-204ENST00000440835 CFAP74Q9C0B2 1584 aa10.11□□□□□ -0.79
PTPRR-204ENST00000440835 ATP10BO94823 1461 aa10.1□□□□□ -0.79
PTPRR-204ENST00000440835 EFCAB5A4FU69 1503 aa10.09□□□□□ -0.79
PTPRR-204ENST00000440835 CSRNP3Q8WYN3 585 aa10.08□□□□□ -0.8
PTPRR-204ENST00000440835 HECW2Q9P2P5 1572 aa10.07□□□□□ -0.8
PTPRR-204ENST00000440835 KIF21BO75037 1637 aa10.06□□□□□ -0.8
PTPRR-204ENST00000440835 ADAMTSL3P82987 1691 aa10.05□□□□□ -0.8
PTPRR-204ENST00000440835 KCNH8Q96L42 1107 aa10.05□□□□□ -0.8
PTPRR-204ENST00000440835 NUP153P49790 1475 aaKnown RBP10.03□□□□□ -0.8
PTPRR-204ENST00000440835 BCORL1Q5H9F3 1711 aa10.02□□□□□ -0.81
PTPRR-204ENST00000440835 MAGI2Q86UL8 1455 aa10.01□□□□□ -0.81
PTPRR-204ENST00000440835 ZMYM4Q5VZL5 1548 aa10.01□□□□□ -0.81
PTPRR-204ENST00000440835 ARHGEF40Q8TER5 1519 aa10.01□□□□□ -0.81
PTPRR-204ENST00000440835 FRMPD1Q5SYB0 1578 aa10.01□□□□□ -0.81
PTPRR-204ENST00000440835 FHOD3Q2V2M9 1422 aa10.01□□□□□ -0.81
PTPRR-204ENST00000440835 RICTORQ6R327 1708 aa10□□□□□ -0.81
PTPRR-204ENST00000440835 DENND4BO75064 1496 aaPredicted RBP10□□□□□ -0.81
PTPRR-204ENST00000440835 PLEKHD1A6NEE1 506 aa9.99□□□□□ -0.81
PTPRR-204ENST00000440835 POGZQ7Z3K3 1410 aa9.98□□□□□ -0.81
PTPRR-204ENST00000440835 PTPRMP28827 1452 aa9.98□□□□□ -0.81
PTPRR-204ENST00000440835 FANCAO15360 1455 aa9.97□□□□□ -0.81
PTPRR-204ENST00000440835 AKNAQ7Z591 1439 aa9.97□□□□□ -0.81
PTPRR-204ENST00000440835 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.97□□□□□ -0.81
PTPRR-204ENST00000440835 HECW1Q76N89 1606 aa9.96□□□□□ -0.81
PTPRR-204ENST00000440835 FMN1Q68DA7 1419 aa9.96□□□□□ -0.81
PTPRR-204ENST00000440835 P3H3Q8IVL6 736 aa9.95□□□□□ -0.82
PTPRR-204ENST00000440835 ILDR1Q86SU0 546 aaPredicted RBP9.95□□□□□ -0.82
PTPRR-204ENST00000440835 ZFYVE16Q7Z3T8 1539 aa9.94□□□□□ -0.82
PTPRR-204ENST00000440835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.94□□□□□ -0.82
PTPRR-204ENST00000440835 HNRNPUL2Q1KMD3 747 aaKnown RBP9.94□□□□□ -0.82
PTPRR-204ENST00000440835 MYO5CQ9NQX4 1742 aa9.94□□□□□ -0.82
PTPRR-204ENST00000440835 MADDQ8WXG6 1647 aa9.94□□□□□ -0.82
PTPRR-204ENST00000440835 PCF11O94913 1555 aaKnown RBP9.93□□□□□ -0.82
PTPRR-204ENST00000440835 PLCH2O75038 1416 aa9.93□□□□□ -0.82
PTPRR-204ENST00000440835 TTC37Q6PGP7 1564 aa9.93□□□□□ -0.82
PTPRR-204ENST00000440835 CDK11AQ9UQ88 783 aaPredicted RBP9.93□□□□□ -0.82
PTPRR-204ENST00000440835 RAPGEF3O95398 923 aa9.92□□□□□ -0.82
PTPRR-204ENST00000440835 RIMS1Q86UR5 1692 aaKnown RBP9.91□□□□□ -0.82
PTPRR-204ENST00000440835 REREQ9P2R6 1566 aa9.9□□□□□ -0.82
PTPRR-204ENST00000440835 KIF14Q15058 1648 aa9.9□□□□□ -0.82
PTPRR-204ENST00000440835 CLIP1P30622 1438 aa9.89□□□□□ -0.83
PTPRR-204ENST00000440835 FBXO41Q8TF61 875 aa9.89□□□□□ -0.83
PTPRR-204ENST00000440835 FER1L4A9Z1Z3 1794 aa9.89□□□□□ -0.83
PTPRR-204ENST00000440835 ATP10AO60312 1499 aa9.89□□□□□ -0.83
PTPRR-204ENST00000440835 LMTK3Q96Q04 1460 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms