RNA–Protein interactions for RNA: ENST00000440633.1

LINC00545-201, long intergenic non-protein coding RNA 545, humanhuman

TSL 2 BASIC

Gene LINC00545, Length 411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00545-201ENST00000440633 TOP2BQ02880 1626 aa18.1■□□□□ 0.49
LINC00545-201ENST00000440633 PRG4Q92954 1404 aaPredicted RBP18.1■□□□□ 0.49
LINC00545-201ENST00000440633 KDM6BO15054 1643 aa18.09■□□□□ 0.49
LINC00545-201ENST00000440633 WRNQ14191 1432 aaPredicted RBP eCLIP18.09■□□□□ 0.49
LINC00545-201ENST00000440633 KDM4FA0A1W2PPD8 638 aa18.04■□□□□ 0.48
LINC00545-201ENST00000440633 TSPOAP1O95153 1857 aa18.01■□□□□ 0.47
LINC00545-201ENST00000440633 FAM69CQ0P6D2 419 aa17.99■□□□□ 0.47
LINC00545-201ENST00000440633 ILDR1Q86SU0 546 aaPredicted RBP17.99■□□□□ 0.47
LINC00545-201ENST00000440633 PPRC1Q5VV67 1664 aaKnown RBP17.93■□□□□ 0.46
LINC00545-201ENST00000440633 JPH4Q96JJ6 628 aa17.92■□□□□ 0.46
LINC00545-201ENST00000440633 ADGRL1O94910 1474 aa17.88■□□□□ 0.45
LINC00545-201ENST00000440633 HECW2Q9P2P5 1572 aa17.85■□□□□ 0.45
LINC00545-201ENST00000440633 KIAA0586Q9BVV6 1533 aa17.82■□□□□ 0.44
LINC00545-201ENST00000440633 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
LINC00545-201ENST00000440633 GLI2P10070 1586 aa17.79■□□□□ 0.44
LINC00545-201ENST00000440633 CUL7Q14999 1698 aa17.78■□□□□ 0.44
LINC00545-201ENST00000440633 ABCC2Q92887 1545 aa17.77■□□□□ 0.44
LINC00545-201ENST00000440633 COL17A1Q9UMD9 1497 aaPredicted RBP17.75■□□□□ 0.43
LINC00545-201ENST00000440633 ASXL2Q76L83 1435 aa17.74■□□□□ 0.43
LINC00545-201ENST00000440633 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
LINC00545-201ENST00000440633 PLB1Q6P1J6 1458 aa17.69■□□□□ 0.42
LINC00545-201ENST00000440633 PTPRGP23470 1445 aa17.68■□□□□ 0.42
LINC00545-201ENST00000440633 IGF1RP08069 1367 aa17.66■□□□□ 0.42
LINC00545-201ENST00000440633 UHRF1BP1LA0JNW5 1464 aa17.66■□□□□ 0.42
LINC00545-201ENST00000440633 EPRSP07814 1512 aaKnown RBP17.66■□□□□ 0.42
LINC00545-201ENST00000440633 IQGAP2Q13576 1575 aa17.66■□□□□ 0.42
LINC00545-201ENST00000440633 SUPT5HO00267 1087 aaKnown RBP17.64■□□□□ 0.41
LINC00545-201ENST00000440633 ZCCHC11Q5TAX3 1644 aaKnown RBP17.64■□□□□ 0.41
LINC00545-201ENST00000440633 TNIKQ9UKE5 1360 aa17.63■□□□□ 0.41
LINC00545-201ENST00000440633 DISP1Q96F81 1524 aa17.62■□□□□ 0.41
LINC00545-201ENST00000440633 KDM5BQ9UGL1 1544 aa17.61■□□□□ 0.41
LINC00545-201ENST00000440633 KIF27Q86VH2 1401 aa17.6■□□□□ 0.41
LINC00545-201ENST00000440633 TEX14Q8IWB6 1497 aa17.59■□□□□ 0.41
LINC00545-201ENST00000440633 CARMIL2Q6F5E8 1435 aa17.58■□□□□ 0.41
LINC00545-201ENST00000440633 UACAQ9BZF9 1416 aa17.58■□□□□ 0.41
LINC00545-201ENST00000440633 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.4
LINC00545-201ENST00000440633 KIF21BO75037 1637 aa17.55■□□□□ 0.4
LINC00545-201ENST00000440633 KIAA0556O60303 1618 aa17.54■□□□□ 0.4
LINC00545-201ENST00000440633 WDR7Q9Y4E6 1490 aa17.51■□□□□ 0.39
LINC00545-201ENST00000440633 UGGT2Q9NYU1 1516 aa17.51■□□□□ 0.39
LINC00545-201ENST00000440633 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
LINC00545-201ENST00000440633 CFAP43Q8NDM7 1665 aa17.48■□□□□ 0.39
LINC00545-201ENST00000440633 MAGI3Q5TCQ9 1506 aa17.45■□□□□ 0.38
LINC00545-201ENST00000440633 ADAMTSL3P82987 1691 aa17.39■□□□□ 0.37
LINC00545-201ENST00000440633 FBXO41Q8TF61 875 aa17.39■□□□□ 0.37
LINC00545-201ENST00000440633 ABCA8O94911 1581 aa17.39■□□□□ 0.37
LINC00545-201ENST00000440633 CTTNBP2Q8WZ74 1663 aa17.37■□□□□ 0.37
LINC00545-201ENST00000440633 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
LINC00545-201ENST00000440633 PTPRMP28827 1452 aa17.34■□□□□ 0.37
LINC00545-201ENST00000440633 PCF11O94913 1555 aaKnown RBP17.33■□□□□ 0.37
LINC00545-201ENST00000440633 RAPGEF2Q9Y4G8 1499 aa17.33■□□□□ 0.37
LINC00545-201ENST00000440633 ARAP3Q8WWN8 1544 aa17.32■□□□□ 0.36
LINC00545-201ENST00000440633 MADDQ8WXG6 1647 aa17.32■□□□□ 0.36
LINC00545-201ENST00000440633 FRMPD1Q5SYB0 1578 aa17.32■□□□□ 0.36
LINC00545-201ENST00000440633 LMTK3Q96Q04 1460 aa17.31■□□□□ 0.36
LINC00545-201ENST00000440633 BCORL1Q5H9F3 1711 aa17.3■□□□□ 0.36
LINC00545-201ENST00000440633 ABCA9Q8IUA7 1624 aa17.28■□□□□ 0.36
LINC00545-201ENST00000440633 ARHGEF40Q8TER5 1519 aa17.23■□□□□ 0.35
LINC00545-201ENST00000440633 GOLGA3Q08378 1498 aa17.22■□□□□ 0.35
LINC00545-201ENST00000440633 RIMS1Q86UR5 1692 aaKnown RBP17.22■□□□□ 0.35
LINC00545-201ENST00000440633 KCNH8Q96L42 1107 aa17.2■□□□□ 0.34
LINC00545-201ENST00000440633 SIGLEC1Q9BZZ2 1709 aa17.18■□□□□ 0.34
LINC00545-201ENST00000440633 RICTORQ6R327 1708 aa17.16■□□□□ 0.34
LINC00545-201ENST00000440633 ATP10BO94823 1461 aa17.15■□□□□ 0.34
LINC00545-201ENST00000440633 NEO1Q92859 1461 aa17.14■□□□□ 0.33
LINC00545-201ENST00000440633 RAPGEF3O95398 923 aa17.12■□□□□ 0.33
LINC00545-201ENST00000440633 ARID3CA6NKF2 412 aa17.1■□□□□ 0.33
LINC00545-201ENST00000440633 SAMD9Q5K651 1589 aa17.1■□□□□ 0.33
LINC00545-201ENST00000440633 PHLDB1Q86UU1 1377 aa17.09■□□□□ 0.33
LINC00545-201ENST00000440633 PRXQ9BXM0 1461 aa17.09■□□□□ 0.33
LINC00545-201ENST00000440633 RAPGEF6Q8TEU7 1601 aa17.08■□□□□ 0.32
LINC00545-201ENST00000440633 ZMYM4Q5VZL5 1548 aa17.07■□□□□ 0.32
LINC00545-201ENST00000440633 HSPA2P54652 639 aa17.06■□□□□ 0.32
LINC00545-201ENST00000440633 FER1L4A9Z1Z3 1794 aa17.05■□□□□ 0.32
LINC00545-201ENST00000440633 TTC37Q6PGP7 1564 aa17.05■□□□□ 0.32
LINC00545-201ENST00000440633 NUP153P49790 1475 aaKnown RBP17.03■□□□□ 0.32
LINC00545-201ENST00000440633 CFAP74Q9C0B2 1584 aa17.01■□□□□ 0.31
LINC00545-201ENST00000440633 ARID4BQ4LE39 1312 aaPredicted RBP17■□□□□ 0.31
LINC00545-201ENST00000440633 FANCAO15360 1455 aa17■□□□□ 0.31
LINC00545-201ENST00000440633 FHOD3Q2V2M9 1422 aa17■□□□□ 0.31
LINC00545-201ENST00000440633 ILDR2Q71H61 639 aa17■□□□□ 0.31
LINC00545-201ENST00000440633 ZFYVE16Q7Z3T8 1539 aa17■□□□□ 0.31
LINC00545-201ENST00000440633 YEATS2Q9ULM3 1422 aa16.99■□□□□ 0.31
LINC00545-201ENST00000440633 DENND4BO75064 1496 aaPredicted RBP16.99■□□□□ 0.31
LINC00545-201ENST00000440633 SPATA31D1Q6ZQQ2 1576 aa16.98■□□□□ 0.31
LINC00545-201ENST00000440633 PREX1Q8TCU6 1659 aa16.98■□□□□ 0.31
LINC00545-201ENST00000440633 EFCAB5A4FU69 1503 aa16.97■□□□□ 0.31
LINC00545-201ENST00000440633 CERKQ8TCT0 537 aa16.97■□□□□ 0.31
LINC00545-201ENST00000440633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.96■□□□□ 0.31
LINC00545-201ENST00000440633 STRCQ7RTU9 1775 aa16.96■□□□□ 0.31
LINC00545-201ENST00000440633 HECW1Q76N89 1606 aa16.95■□□□□ 0.3
LINC00545-201ENST00000440633 AKNAQ7Z591 1439 aa16.95■□□□□ 0.3
LINC00545-201ENST00000440633 P3H3Q8IVL6 736 aa16.94■□□□□ 0.3
LINC00545-201ENST00000440633 ARHGEF12Q9NZN5 1544 aa16.94■□□□□ 0.3
LINC00545-201ENST00000440633 DISP3Q9P2K9 1392 aa16.93■□□□□ 0.3
LINC00545-201ENST00000440633 POGZQ7Z3K3 1410 aa16.92■□□□□ 0.3
LINC00545-201ENST00000440633 SOCS7O14512 581 aa16.9■□□□□ 0.3
LINC00545-201ENST00000440633 PLPPR3Q6T4P5 718 aa16.9■□□□□ 0.3
LINC00545-201ENST00000440633 MAGI2Q86UL8 1455 aa16.88■□□□□ 0.29
LINC00545-201ENST00000440633 CDK13Q14004 1512 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms