RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 PRG4Q92954 1404 aaPredicted RBP35.54■■■■□ 3.28
VIL1-204ENST00000440053 CUL7Q14999 1698 aa35.5■■■■□ 3.27
VIL1-204ENST00000440053 RUSC2Q8N2Y8 1516 aa35.49■■■■□ 3.27
VIL1-204ENST00000440053 KIAA0586Q9BVV6 1533 aa35.41■■■■□ 3.26
VIL1-204ENST00000440053 RAPGEF2Q9Y4G8 1499 aa35.22■■■■□ 3.23
VIL1-204ENST00000440053 TTBK1Q5TCY1 1321 aaPredicted RBP35.17■■■■□ 3.22
VIL1-204ENST00000440053 IQGAP2Q13576 1575 aa35.09■■■■□ 3.21
VIL1-204ENST00000440053 PTPRGP23470 1445 aa35.04■■■■□ 3.2
VIL1-204ENST00000440053 CARMIL2Q6F5E8 1435 aa35.03■■■■□ 3.2
VIL1-204ENST00000440053 NPM1P06748 294 aaKnown RBP eCLIP35.03■■■■□ 3.2
VIL1-204ENST00000440053 TNIKQ9UKE5 1360 aa35■■■■□ 3.19
VIL1-204ENST00000440053 ADCY10Q96PN6 1610 aa34.99■■■■□ 3.19
VIL1-204ENST00000440053 PRXQ9BXM0 1461 aa34.98■■■■□ 3.19
VIL1-204ENST00000440053 DISP1Q96F81 1524 aa34.97■■■■□ 3.19
VIL1-204ENST00000440053 CSRNP3Q8WYN3 585 aa34.94■■■■□ 3.18
VIL1-204ENST00000440053 UGGT2Q9NYU1 1516 aa34.9■■■■□ 3.18
VIL1-204ENST00000440053 FAM9AQ8IZU1 332 aaPredicted RBP34.86■■■■□ 3.17
VIL1-204ENST00000440053 FAM69CQ0P6D2 419 aa34.84■■■■□ 3.17
VIL1-204ENST00000440053 CHIC1Q5VXU3 224 aa34.79■■■■□ 3.16
VIL1-204ENST00000440053 MAPKBP1O60336 1514 aa34.79■■■■□ 3.16
VIL1-204ENST00000440053 KIF13AQ9H1H9 1805 aa34.79■■■■□ 3.16
VIL1-204ENST00000440053 CTTNBP2Q8WZ74 1663 aa34.79■■■■□ 3.16
VIL1-204ENST00000440053 ABCC10Q5T3U5 1492 aa34.77■■■■□ 3.16
VIL1-204ENST00000440053 KIAA0556O60303 1618 aa34.77■■■■□ 3.16
VIL1-204ENST00000440053 UACAQ9BZF9 1416 aa34.77■■■■□ 3.16
VIL1-204ENST00000440053 ABCC2Q92887 1545 aa34.72■■■■□ 3.15
VIL1-204ENST00000440053 UHRF1BP1LA0JNW5 1464 aa34.69■■■■□ 3.14
VIL1-204ENST00000440053 EEA1Q15075 1411 aa34.69■■■■□ 3.14
VIL1-204ENST00000440053 P3H3Q8IVL6 736 aa34.66■■■■□ 3.14
VIL1-204ENST00000440053 DIP2BQ9P265 1576 aa34.66■■■■□ 3.14
VIL1-204ENST00000440053 GOLGA3Q08378 1498 aa34.64■■■■□ 3.14
VIL1-204ENST00000440053 ASXL2Q76L83 1435 aa34.61■■■■□ 3.13
VIL1-204ENST00000440053 PLB1Q6P1J6 1458 aa34.6■■■■□ 3.13
VIL1-204ENST00000440053 RANGAP1P46060 587 aaPredicted RBP34.58■■■■□ 3.13
VIL1-204ENST00000440053 KDM5BQ9UGL1 1544 aa34.56■■■■□ 3.12
VIL1-204ENST00000440053 EHMT2Q96KQ7 1210 aa34.55■■■■□ 3.12
VIL1-204ENST00000440053 ZCCHC11Q5TAX3 1644 aaKnown RBP34.47■■■■□ 3.11
VIL1-204ENST00000440053 ABCA8O94911 1581 aa34.45■■■■□ 3.11
VIL1-204ENST00000440053 TSPOAP1O95153 1857 aa34.44■■■■□ 3.1
VIL1-204ENST00000440053 ARID3CA6NKF2 412 aa34.42■■■■□ 3.1
VIL1-204ENST00000440053 KIF21BO75037 1637 aa34.38■■■■□ 3.09
VIL1-204ENST00000440053 EPRSP07814 1512 aaKnown RBP34.38■■■■□ 3.09
VIL1-204ENST00000440053 SAMD9Q5K651 1589 aa34.37■■■■□ 3.09
VIL1-204ENST00000440053 GLI2P10070 1586 aa34.35■■■■□ 3.09
VIL1-204ENST00000440053 KCNH8Q96L42 1107 aa34.33■■■■□ 3.09
VIL1-204ENST00000440053 UBTFP17480 764 aaKnown RBP34.33■■■■□ 3.09
VIL1-204ENST00000440053 WDR7Q9Y4E6 1490 aa34.3■■■■□ 3.08
VIL1-204ENST00000440053 FHOD3Q2V2M9 1422 aa34.29■■■■□ 3.08
VIL1-204ENST00000440053 ATP10BO94823 1461 aa34.25■■■■□ 3.07
VIL1-204ENST00000440053 PPRC1Q5VV67 1664 aaKnown RBP34.24■■■■□ 3.07
VIL1-204ENST00000440053 KDM6BO15054 1643 aa34.23■■■■□ 3.07
VIL1-204ENST00000440053 MAP3K4Q9Y6R4 1608 aa34.18■■■■□ 3.06
VIL1-204ENST00000440053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.16■■■■□ 3.06
VIL1-204ENST00000440053 HNRNPUL2Q1KMD3 747 aaKnown RBP34.16■■■■□ 3.06
VIL1-204ENST00000440053 RAPGEF6Q8TEU7 1601 aa34.16■■■■□ 3.06
VIL1-204ENST00000440053 COL17A1Q9UMD9 1497 aaPredicted RBP34.11■■■■□ 3.05
VIL1-204ENST00000440053 AEBP2Q6ZN18 517 aaPredicted RBP34.11■■■■□ 3.05
VIL1-204ENST00000440053 CD109Q6YHK3 1445 aa34.1■■■■□ 3.05
VIL1-204ENST00000440053 NUP153P49790 1475 aaKnown RBP34.09■■■■□ 3.05
VIL1-204ENST00000440053 EFCAB5A4FU69 1503 aa34.08■■■■□ 3.05
VIL1-204ENST00000440053 TEX14Q8IWB6 1497 aa34.04■■■■□ 3.04
VIL1-204ENST00000440053 ARHGAP35Q9NRY4 1499 aa34■■■■□ 3.03
VIL1-204ENST00000440053 MAGI3Q5TCQ9 1506 aa33.97■■■■□ 3.03
VIL1-204ENST00000440053 CFAP43Q8NDM7 1665 aa33.97■■■■□ 3.03
VIL1-204ENST00000440053 ATP1B4Q9UN42 357 aaPredicted RBP33.95■■■■□ 3.02
VIL1-204ENST00000440053 PLEKHD1A6NEE1 506 aa33.93■■■■□ 3.02
VIL1-204ENST00000440053 KDM4FA0A1W2PPD8 638 aa33.86■■■■□ 3.01
VIL1-204ENST00000440053 CDK13Q14004 1512 aaKnown RBP33.84■■■■□ 3.01
VIL1-204ENST00000440053 ABCA9Q8IUA7 1624 aa33.84■■■■□ 3.01
VIL1-204ENST00000440053 FMN1Q68DA7 1419 aa33.84■■■■□ 3.01
VIL1-204ENST00000440053 ARAP3Q8WWN8 1544 aa33.7■■■□□ 2.99
VIL1-204ENST00000440053 RAPGEF3O95398 923 aa33.69■■■□□ 2.98
VIL1-204ENST00000440053 HECW1Q76N89 1606 aa33.69■■■□□ 2.98
VIL1-204ENST00000440053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.69■■■□□ 2.98
VIL1-204ENST00000440053 PHLDB1Q86UU1 1377 aa33.65■■■□□ 2.98
VIL1-204ENST00000440053 NEO1Q92859 1461 aa33.63■■■□□ 2.97
VIL1-204ENST00000440053 CLIP1P30622 1438 aa33.63■■■□□ 2.97
VIL1-204ENST00000440053 CDK11AQ9UQ88 783 aaPredicted RBP33.62■■■□□ 2.97
VIL1-204ENST00000440053 TTC37Q6PGP7 1564 aa33.62■■■□□ 2.97
VIL1-204ENST00000440053 ADGRL1O94910 1474 aa33.59■■■□□ 2.97
VIL1-204ENST00000440053 LRRIQ1Q96JM4 1722 aa33.57■■■□□ 2.96
VIL1-204ENST00000440053 CASKIN1Q8WXD9 1431 aa33.57■■■□□ 2.96
VIL1-204ENST00000440053 AKNAQ7Z591 1439 aa33.55■■■□□ 2.96
VIL1-204ENST00000440053 FANCAO15360 1455 aa33.54■■■□□ 2.96
VIL1-204ENST00000440053 PCF11O94913 1555 aaKnown RBP33.53■■■□□ 2.96
VIL1-204ENST00000440053 TROQ12816 1431 aaPredicted RBP33.5■■■□□ 2.95
VIL1-204ENST00000440053 PLCH2O75038 1416 aa33.5■■■□□ 2.95
VIL1-204ENST00000440053 LOC105371045A0A1W2PR82 267 aa33.5■■■□□ 2.95
VIL1-204ENST00000440053 KIF14Q15058 1648 aa33.48■■■□□ 2.95
VIL1-204ENST00000440053 FRMPD1Q5SYB0 1578 aa33.47■■■□□ 2.95
VIL1-204ENST00000440053 DENND4BO75064 1496 aaPredicted RBP33.45■■■□□ 2.95
VIL1-204ENST00000440053 CCDC18Q5T9S5 1454 aa33.41■■■□□ 2.94
VIL1-204ENST00000440053 EFCAB2Q5VUJ9 269 aa33.4■■■□□ 2.94
VIL1-204ENST00000440053 FYCO1Q9BQS8 1478 aa33.4■■■□□ 2.94
VIL1-204ENST00000440053 CFAP74Q9C0B2 1584 aa33.38■■■□□ 2.93
VIL1-204ENST00000440053 SCAPERQ9BY12 1400 aa33.37■■■□□ 2.93
VIL1-204ENST00000440053 CEP162Q5TB80 1403 aa33.37■■■□□ 2.93
VIL1-204ENST00000440053 RICTORQ6R327 1708 aa33.34■■■□□ 2.93
VIL1-204ENST00000440053 MYO5CQ9NQX4 1742 aa33.32■■■□□ 2.92
VIL1-204ENST00000440053 ARID4BQ4LE39 1312 aaPredicted RBP33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms