RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	RUSC2	Q8N2Y8	1516 aa		29.03	■■■□□ 2.24
LAMB1-205	ENST00000439976	ABCC10	Q5T3U5	1492 aa		28.86	■■■□□ 2.21
LAMB1-205	ENST00000439976	MAPKBP1	O60336	1514 aa		28.85	■■■□□ 2.21
LAMB1-205	ENST00000439976	ADCY10	Q96PN6	1610 aa		28.85	■■■□□ 2.21
LAMB1-205	ENST00000439976	IGF1R	P08069	1367 aa		28.85	■■■□□ 2.21
LAMB1-205	ENST00000439976	KIAA0586	Q9BVV6	1533 aa		28.83	■■■□□ 2.21
LAMB1-205	ENST00000439976	FAM69C	Q0P6D2	419 aa		28.8	■■■□□ 2.2
LAMB1-205	ENST00000439976	DIP2B	Q9P265	1576 aa		28.79	■■■□□ 2.2
LAMB1-205	ENST00000439976	KIF27	Q86VH2	1401 aa		28.77	■■■□□ 2.2
LAMB1-205	ENST00000439976	CUL7	Q14999	1698 aa		28.76	■■■□□ 2.19
LAMB1-205	ENST00000439976	NPM1	P06748	294 aa	Known RBP eCLIP	28.75	■■■□□ 2.19
LAMB1-205	ENST00000439976	CARMIL1	Q5VZK9	1371 aa		28.61	■■■□□ 2.17
LAMB1-205	ENST00000439976	PTPRG	P23470	1445 aa		28.6	■■■□□ 2.17
LAMB1-205	ENST00000439976	KDM6B	O15054	1643 aa		28.57	■■■□□ 2.16
LAMB1-205	ENST00000439976	TSPOAP1	O95153	1857 aa		28.56	■■■□□ 2.16
LAMB1-205	ENST00000439976	TNIK	Q9UKE5	1360 aa		28.52	■■■□□ 2.16
LAMB1-205	ENST00000439976	ABCC2	Q92887	1545 aa		28.51	■■■□□ 2.15
LAMB1-205	ENST00000439976	CARMIL2	Q6F5E8	1435 aa		28.49	■■■□□ 2.15
LAMB1-205	ENST00000439976	IQGAP2	Q13576	1575 aa		28.49	■■■□□ 2.15
LAMB1-205	ENST00000439976	KDM4F	A0A1W2PPD8	638 aa		28.48	■■■□□ 2.15
LAMB1-205	ENST00000439976	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.46	■■■□□ 2.15
LAMB1-205	ENST00000439976	ASXL2	Q76L83	1435 aa		28.43	■■■□□ 2.14
LAMB1-205	ENST00000439976	DISP1	Q96F81	1524 aa		28.43	■■■□□ 2.14
LAMB1-205	ENST00000439976	UHRF1BP1L	A0JNW5	1464 aa		28.43	■■■□□ 2.14
LAMB1-205	ENST00000439976	PPRC1	Q5VV67	1664 aa	Known RBP	28.42	■■■□□ 2.14
LAMB1-205	ENST00000439976	GLI2	P10070	1586 aa		28.41	■■■□□ 2.14
LAMB1-205	ENST00000439976	PLB1	Q6P1J6	1458 aa		28.4	■■■□□ 2.14
LAMB1-205	ENST00000439976	UACA	Q9BZF9	1416 aa		28.38	■■■□□ 2.13
LAMB1-205	ENST00000439976	UGGT2	Q9NYU1	1516 aa		28.33	■■■□□ 2.13
LAMB1-205	ENST00000439976	KDM5B	Q9UGL1	1544 aa		28.32	■■■□□ 2.12
LAMB1-205	ENST00000439976	RAPGEF2	Q9Y4G8	1499 aa		28.31	■■■□□ 2.12
LAMB1-205	ENST00000439976	EPRS	P07814	1512 aa	Known RBP	28.28	■■■□□ 2.12
LAMB1-205	ENST00000439976	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.27	■■■□□ 2.12
LAMB1-205	ENST00000439976	KIAA0556	O60303	1618 aa		28.26	■■■□□ 2.11
LAMB1-205	ENST00000439976	MAP3K4	Q9Y6R4	1608 aa		28.25	■■■□□ 2.11
LAMB1-205	ENST00000439976	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.24	■■■□□ 2.11
LAMB1-205	ENST00000439976	ADGRL1	O94910	1474 aa		28.15	■■■□□ 2.1
LAMB1-205	ENST00000439976	TEX14	Q8IWB6	1497 aa		28.12	■■■□□ 2.09
LAMB1-205	ENST00000439976	WDR7	Q9Y4E6	1490 aa		28.1	■■■□□ 2.09
LAMB1-205	ENST00000439976	CTTNBP2	Q8WZ74	1663 aa		28.1	■■■□□ 2.09
LAMB1-205	ENST00000439976	ABCA8	O94911	1581 aa		28.04	■■■□□ 2.08
LAMB1-205	ENST00000439976	GOLGA3	Q08378	1498 aa		28.01	■■■□□ 2.07
LAMB1-205	ENST00000439976	PRX	Q9BXM0	1461 aa		28	■■■□□ 2.07
LAMB1-205	ENST00000439976	MAGI3	Q5TCQ9	1506 aa		27.97	■■■□□ 2.07
LAMB1-205	ENST00000439976	CD109	Q6YHK3	1445 aa		27.95	■■■□□ 2.07
LAMB1-205	ENST00000439976	CFAP43	Q8NDM7	1665 aa		27.95	■■■□□ 2.07
LAMB1-205	ENST00000439976	KCNH8	Q96L42	1107 aa		27.9	■■■□□ 2.06
LAMB1-205	ENST00000439976	ILDR1	Q86SU0	546 aa	Predicted RBP	27.87	■■■□□ 2.05
LAMB1-205	ENST00000439976	HECW2	Q9P2P5	1572 aa		27.86	■■■□□ 2.05
LAMB1-205	ENST00000439976	ATP10B	O94823	1461 aa		27.8	■■■□□ 2.04
LAMB1-205	ENST00000439976	ARAP3	Q8WWN8	1544 aa		27.77	■■■□□ 2.04
LAMB1-205	ENST00000439976	ARID3C	A6NKF2	412 aa		27.75	■■■□□ 2.03
LAMB1-205	ENST00000439976	P3H3	Q8IVL6	736 aa		27.75	■■■□□ 2.03
LAMB1-205	ENST00000439976	KIF21B	O75037	1637 aa		27.74	■■■□□ 2.03
LAMB1-205	ENST00000439976	SAMD9	Q5K651	1589 aa		27.73	■■■□□ 2.03
LAMB1-205	ENST00000439976	ABCA9	Q8IUA7	1624 aa		27.71	■■■□□ 2.03
LAMB1-205	ENST00000439976	RAPGEF6	Q8TEU7	1601 aa		27.64	■■■□□ 2.02
LAMB1-205	ENST00000439976	CSRNP3	Q8WYN3	585 aa		27.64	■■■□□ 2.02
LAMB1-205	ENST00000439976	PHLDB1	Q86UU1	1377 aa		27.62	■■■□□ 2.01
LAMB1-205	ENST00000439976	FAM9A	Q8IZU1	332 aa	Predicted RBP	27.6	■■■□□ 2.01
LAMB1-205	ENST00000439976	NUP153	P49790	1475 aa	Known RBP	27.58	■■■□□ 2.01
LAMB1-205	ENST00000439976	NEO1	Q92859	1461 aa		27.58	■■■□□ 2.01
LAMB1-205	ENST00000439976	RAPGEF3	O95398	923 aa		27.58	■■■□□ 2.01
LAMB1-205	ENST00000439976	ADAMTSL3	P82987	1691 aa		27.57	■■■□□ 2
LAMB1-205	ENST00000439976	FRMPD1	Q5SYB0	1578 aa		27.56	■■■□□ 2
LAMB1-205	ENST00000439976	PTPRM	P28827	1452 aa		27.51	■■■□□ 2
LAMB1-205	ENST00000439976	FHOD3	Q2V2M9	1422 aa		27.5	■■□□□ 1.99
LAMB1-205	ENST00000439976	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	27.47	■■□□□ 1.99
LAMB1-205	ENST00000439976	HNRNPUL2	Q1KMD3	747 aa	Known RBP	27.47	■■□□□ 1.99
LAMB1-205	ENST00000439976	BCORL1	Q5H9F3	1711 aa		27.46	■■□□□ 1.99
LAMB1-205	ENST00000439976	EEA1	Q15075	1411 aa		27.45	■■□□□ 1.98
LAMB1-205	ENST00000439976	RANGAP1	P46060	587 aa	Predicted RBP	27.42	■■□□□ 1.98
LAMB1-205	ENST00000439976	MADD	Q8WXG6	1647 aa		27.41	■■□□□ 1.98
LAMB1-205	ENST00000439976	RICTOR	Q6R327	1708 aa		27.4	■■□□□ 1.98
LAMB1-205	ENST00000439976	ARHGEF40	Q8TER5	1519 aa		27.39	■■□□□ 1.98
LAMB1-205	ENST00000439976	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	27.38	■■□□□ 1.97
LAMB1-205	ENST00000439976	PLEKHD1	A6NEE1	506 aa		27.37	■■□□□ 1.97
LAMB1-205	ENST00000439976	DENND4B	O75064	1496 aa	Predicted RBP	27.37	■■□□□ 1.97
LAMB1-205	ENST00000439976	AKNA	Q7Z591	1439 aa		27.36	■■□□□ 1.97
LAMB1-205	ENST00000439976	TTC37	Q6PGP7	1564 aa		27.35	■■□□□ 1.97
LAMB1-205	ENST00000439976	FANCA	O15360	1455 aa		27.34	■■□□□ 1.97
LAMB1-205	ENST00000439976	EFCAB5	A4FU69	1503 aa		27.34	■■□□□ 1.97
LAMB1-205	ENST00000439976	ARID4B	Q4LE39	1312 aa	Predicted RBP	27.34	■■□□□ 1.97
LAMB1-205	ENST00000439976	LMTK3	Q96Q04	1460 aa		27.32	■■□□□ 1.96
LAMB1-205	ENST00000439976	PCF11	O94913	1555 aa	Known RBP	27.31	■■□□□ 1.96
LAMB1-205	ENST00000439976	ZMYM4	Q5VZL5	1548 aa		27.3	■■□□□ 1.96
LAMB1-205	ENST00000439976	CFAP74	Q9C0B2	1584 aa		27.3	■■□□□ 1.96
LAMB1-205	ENST00000439976	SIGLEC1	Q9BZZ2	1709 aa		27.28	■■□□□ 1.96
LAMB1-205	ENST00000439976	RIMS1	Q86UR5	1692 aa	Known RBP	27.27	■■□□□ 1.96
LAMB1-205	ENST00000439976	CDK13	Q14004	1512 aa	Known RBP	27.27	■■□□□ 1.96
LAMB1-205	ENST00000439976	FBXO41	Q8TF61	875 aa		27.27	■■□□□ 1.96
LAMB1-205	ENST00000439976	YEATS2	Q9ULM3	1422 aa		27.24	■■□□□ 1.95
LAMB1-205	ENST00000439976	ZFYVE16	Q7Z3T8	1539 aa		27.21	■■□□□ 1.95
LAMB1-205	ENST00000439976	HECW1	Q76N89	1606 aa		27.19	■■□□□ 1.94
LAMB1-205	ENST00000439976	MAGI2	Q86UL8	1455 aa		27.19	■■□□□ 1.94
LAMB1-205	ENST00000439976	PLCH2	O75038	1416 aa		27.18	■■□□□ 1.94
LAMB1-205	ENST00000439976	POGZ	Q7Z3K3	1410 aa		27.16	■■□□□ 1.94
LAMB1-205	ENST00000439976	SCAPER	Q9BY12	1400 aa		27.15	■■□□□ 1.94
LAMB1-205	ENST00000439976	HSPA2	P54652	639 aa		27.11	■■□□□ 1.93
LAMB1-205	ENST00000439976	ARHGAP35	Q9NRY4	1499 aa		27.11	■■□□□ 1.93

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms