RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 EEA1Q15075 1411 aa15.93■□□□□ 0.14
GFRA1-204ENST00000439649 ABCC9O60706 1549 aa15.93■□□□□ 0.14
GFRA1-204ENST00000439649 DDX10Q13206 875 aaKnown RBP15.92■□□□□ 0.14
GFRA1-204ENST00000439649 RSF1Q96T23 1441 aaPredicted RBP15.92■□□□□ 0.14
GFRA1-204ENST00000439649 MS4A1P11836 297 aa15.92■□□□□ 0.14
GFRA1-204ENST00000439649 FTSJ3Q8IY81 847 aaKnown RBP15.91■□□□□ 0.14
GFRA1-204ENST00000439649 CFAP53Q96M91 514 aa15.91■□□□□ 0.14
GFRA1-204ENST00000439649 MTUS2Q5JR59 1369 aa15.9■□□□□ 0.14
GFRA1-204ENST00000439649 PTMSP20962 102 aa15.89■□□□□ 0.13
GFRA1-204ENST00000439649 EIF4G2P78344 907 aaKnown RBP eCLIP15.89■□□□□ 0.13
GFRA1-204ENST00000439649 NAP1L5Q96NT1 182 aaPredicted RBP15.88■□□□□ 0.13
GFRA1-204ENST00000439649 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
GFRA1-204ENST00000439649 KAT6BQ8WYB5 2073 aa15.85■□□□□ 0.13
GFRA1-204ENST00000439649 TSPY4P0CV99 314 aa15.84■□□□□ 0.13
GFRA1-204ENST00000439649 TSPY10P0CW01 314 aa15.84■□□□□ 0.13
GFRA1-204ENST00000439649 CLIP1P30622 1438 aa15.84■□□□□ 0.13
GFRA1-204ENST00000439649 USP35Q9P2H5 1018 aa15.83■□□□□ 0.12
GFRA1-204ENST00000439649 MSNP26038 577 aaKnown RBP15.83■□□□□ 0.12
GFRA1-204ENST00000439649 CHGAP10645 457 aaKnown RBP15.8■□□□□ 0.12
GFRA1-204ENST00000439649 KNSTRNQ9Y448 316 aa15.8■□□□□ 0.12
GFRA1-204ENST00000439649 NOP58Q9Y2X3 529 aaKnown RBP15.79■□□□□ 0.12
GFRA1-204ENST00000439649 PNNQ9H307 717 aaKnown RBP15.78■□□□□ 0.12
GFRA1-204ENST00000439649 GOLGA3Q08378 1498 aa15.77■□□□□ 0.11
GFRA1-204ENST00000439649 ARID4BQ4LE39 1312 aaPredicted RBP15.76■□□□□ 0.11
GFRA1-204ENST00000439649 HAP1P54257 671 aaPredicted RBP15.76■□□□□ 0.11
GFRA1-204ENST00000439649 GOLGA6L4A6NEF3 574 aa15.75■□□□□ 0.11
GFRA1-204ENST00000439649 P3H3Q8IVL6 736 aa15.75■□□□□ 0.11
GFRA1-204ENST00000439649 MCCP23508 829 aa15.74■□□□□ 0.11
GFRA1-204ENST00000439649 SALL2Q9Y467 1007 aaPredicted RBP15.74■□□□□ 0.11
GFRA1-204ENST00000439649 KIAA2012Q0VF49 1180 aa15.74■□□□□ 0.11
GFRA1-204ENST00000439649 HSCBQ8IWL3 235 aa15.73■□□□□ 0.11
GFRA1-204ENST00000439649 FGD1P98174 961 aa15.73■□□□□ 0.11
GFRA1-204ENST00000439649 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
GFRA1-204ENST00000439649 HSP90AB1P08238 724 aaKnown RBP15.72■□□□□ 0.11
GFRA1-204ENST00000439649 PPP4R2Q9NY27 417 aa15.71■□□□□ 0.11
GFRA1-204ENST00000439649 MAPK8IP3Q9UPT6 1336 aa15.7■□□□□ 0.1
GFRA1-204ENST00000439649 SYAP1Q96A49 352 aaPredicted RBP15.7■□□□□ 0.1
GFRA1-204ENST00000439649 ARID3CA6NKF2 412 aa15.69■□□□□ 0.1
GFRA1-204ENST00000439649 SCAF1Q9H7N4 1312 aaKnown RBP15.69■□□□□ 0.1
GFRA1-204ENST00000439649 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
GFRA1-204ENST00000439649 CCDC34Q96HJ3 373 aa15.68■□□□□ 0.1
GFRA1-204ENST00000439649 NUDCQ9Y266 331 aa15.68■□□□□ 0.1
GFRA1-204ENST00000439649 PPP1R15AO75807 674 aaPredicted RBP15.67■□□□□ 0.1
GFRA1-204ENST00000439649 RB1CC1Q8TDY2 1594 aa15.67■□□□□ 0.1
GFRA1-204ENST00000439649 HTATSF1O43719 755 aaKnown RBP15.65■□□□□ 0.1
GFRA1-204ENST00000439649 KCNJ4P48050 445 aa15.65■□□□□ 0.1
GFRA1-204ENST00000439649 GBP4Q96PP9 640 aa15.64■□□□□ 0.09
GFRA1-204ENST00000439649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.64■□□□□ 0.09
GFRA1-204ENST00000439649 MIER1Q8N108 512 aa15.63■□□□□ 0.09
GFRA1-204ENST00000439649 GOLGA6L1Q8N7Z2 621 aa15.62■□□□□ 0.09
GFRA1-204ENST00000439649 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
GFRA1-204ENST00000439649 DRC7Q8IY82 874 aa15.62■□□□□ 0.09
GFRA1-204ENST00000439649 FHAD1B1AJZ9 1412 aa15.61■□□□□ 0.09
GFRA1-204ENST00000439649 GOLGA2Q08379 1002 aa15.61■□□□□ 0.09
GFRA1-204ENST00000439649 NOC3LQ8WTT2 800 aaKnown RBP15.61■□□□□ 0.09
GFRA1-204ENST00000439649 CHMP4AQ9BY43 222 aa15.61■□□□□ 0.09
GFRA1-204ENST00000439649 KDM2AQ9Y2K7 1162 aa15.6■□□□□ 0.09
GFRA1-204ENST00000439649 PHF14O94880 888 aa15.59■□□□□ 0.09
GFRA1-204ENST00000439649 PLCB2Q00722 1185 aa15.59■□□□□ 0.09
GFRA1-204ENST00000439649 CEP162Q5TB80 1403 aa15.58■□□□□ 0.09
GFRA1-204ENST00000439649 OS9Q13438 667 aaPredicted RBP15.58■□□□□ 0.09
GFRA1-204ENST00000439649 TNNT3P45378 269 aaPredicted RBP15.57■□□□□ 0.08
GFRA1-204ENST00000439649 IRX6P78412 446 aaPredicted RBP15.57■□□□□ 0.08
GFRA1-204ENST00000439649 GNL2Q13823 731 aaKnown RBP15.56■□□□□ 0.08
GFRA1-204ENST00000439649 TPM4P67936 248 aa15.55■□□□□ 0.08
GFRA1-204ENST00000439649 CHIC2Q9UKJ5 165 aa15.55■□□□□ 0.08
GFRA1-204ENST00000439649 C14orf37Q86TY3 774 aa15.54■□□□□ 0.08
GFRA1-204ENST00000439649 A0A0G2JS52 829 aa15.54■□□□□ 0.08
GFRA1-204ENST00000439649 CSPP1Q1MSJ5 1256 aa15.54■□□□□ 0.08
GFRA1-204ENST00000439649 CALD1Q05682 793 aaKnown RBP15.53■□□□□ 0.08
GFRA1-204ENST00000439649 KIAA1211Q6ZU35 1233 aa15.53■□□□□ 0.08
GFRA1-204ENST00000439649 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.08
GFRA1-204ENST00000439649 KIF27Q86VH2 1401 aa15.52■□□□□ 0.07
GFRA1-204ENST00000439649 TIMELESSQ9UNS1 1208 aa15.51■□□□□ 0.07
GFRA1-204ENST00000439649 KANK1Q14678 1352 aa15.51■□□□□ 0.07
GFRA1-204ENST00000439649 RGS3P49796 1198 aa15.51■□□□□ 0.07
GFRA1-204ENST00000439649 SUPT16HQ9Y5B9 1047 aaKnown RBP15.51■□□□□ 0.07
GFRA1-204ENST00000439649 IPO8O15397 1037 aaKnown RBP15.5■□□□□ 0.07
GFRA1-204ENST00000439649 NPHP1O15259 732 aa15.5■□□□□ 0.07
GFRA1-204ENST00000439649 SETQ01105 290 aaPredicted RBP15.5■□□□□ 0.07
GFRA1-204ENST00000439649 HDAC5Q9UQL6 1122 aa15.49■□□□□ 0.07
GFRA1-204ENST00000439649 CARD11Q9BXL7 1154 aa15.48■□□□□ 0.07
GFRA1-204ENST00000439649 NACADO15069 1562 aa15.48■□□□□ 0.07
GFRA1-204ENST00000439649 EIF3AQ14152 1382 aaKnown RBP15.47■□□□□ 0.07
GFRA1-204ENST00000439649 CHMP7Q8WUX9 453 aaPredicted RBP15.46■□□□□ 0.06
GFRA1-204ENST00000439649 GPATCH3Q96I76 525 aa15.45■□□□□ 0.06
GFRA1-204ENST00000439649 PLEKHD1A6NEE1 506 aa15.45■□□□□ 0.06
GFRA1-204ENST00000439649 CCER2I3L3R5 266 aa15.45■□□□□ 0.06
GFRA1-204ENST00000439649 NAP1L2Q9ULW6 460 aaPredicted RBP15.44■□□□□ 0.06
GFRA1-204ENST00000439649 PHLDB1Q86UU1 1377 aa15.44■□□□□ 0.06
GFRA1-204ENST00000439649 KIF3AQ9Y496 699 aa15.44■□□□□ 0.06
GFRA1-204ENST00000439649 CLSTN1O94985 981 aa15.43■□□□□ 0.06
GFRA1-204ENST00000439649 DEKP35659 375 aaKnown RBP15.43■□□□□ 0.06
GFRA1-204ENST00000439649 CHMP4CQ96CF2 233 aa15.43■□□□□ 0.06
GFRA1-204ENST00000439649 FRAT1Q92837 279 aaPredicted RBP15.42■□□□□ 0.06
GFRA1-204ENST00000439649 KTN1Q86UP2 1357 aaKnown RBP15.42■□□□□ 0.06
GFRA1-204ENST00000439649 A0A0U1RQG5 324 aaPredicted RBP15.41■□□□□ 0.06
GFRA1-204ENST00000439649 RSPH6AQ9H0K4 717 aa15.41■□□□□ 0.06
GFRA1-204ENST00000439649 RTN4Q9NQC3 1192 aaKnown RBP15.4■□□□□ 0.06
GFRA1-204ENST00000439649 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms