RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 HMGXB3Q12766 1538 aa8.45□□□□□ -1.06
BDNF-210ENST00000438929 GOLGA3Q08378 1498 aa8.44□□□□□ -1.06
BDNF-210ENST00000438929 CCDC136Q96JN2 1154 aa8.43□□□□□ -1.06
BDNF-210ENST00000438929 PODXL2Q9NZ53 605 aa8.43□□□□□ -1.06
BDNF-210ENST00000438929 NOP58Q9Y2X3 529 aaKnown RBP8.43□□□□□ -1.06
BDNF-210ENST00000438929 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
BDNF-210ENST00000438929 WRNQ14191 1432 aaPredicted RBP eCLIP8.43□□□□□ -1.06
BDNF-210ENST00000438929 PLPPR3Q6T4P5 718 aa8.43□□□□□ -1.06
BDNF-210ENST00000438929 CCDC88BA6NC98 1476 aa8.42□□□□□ -1.06
BDNF-210ENST00000438929 BAZ1BQ9UIG0 1483 aaKnown RBP8.42□□□□□ -1.06
BDNF-210ENST00000438929 TONSLQ96HA7 1378 aa8.41□□□□□ -1.06
BDNF-210ENST00000438929 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.41□□□□□ -1.06
BDNF-210ENST00000438929 P3H3Q8IVL6 736 aa8.4□□□□□ -1.06
BDNF-210ENST00000438929 PPP4R2Q9NY27 417 aa8.4□□□□□ -1.06
BDNF-210ENST00000438929 ABCC8Q09428 1581 aa8.39□□□□□ -1.07
BDNF-210ENST00000438929 MRS2Q9HD23 443 aa8.39□□□□□ -1.07
BDNF-210ENST00000438929 EEA1Q15075 1411 aa8.38□□□□□ -1.07
BDNF-210ENST00000438929 DHX57Q6P158 1386 aaKnown RBP8.38□□□□□ -1.07
BDNF-210ENST00000438929 MSH5O43196 834 aa8.38□□□□□ -1.07
BDNF-210ENST00000438929 ANO8Q9HCE9 1232 aaPredicted RBP8.38□□□□□ -1.07
BDNF-210ENST00000438929 LAS1LQ9Y4W2 734 aaKnown RBP8.38□□□□□ -1.07
BDNF-210ENST00000438929 KANK4Q5T7N3 995 aaPredicted RBP8.37□□□□□ -1.07
BDNF-210ENST00000438929 FANCIQ9NVI1 1328 aa8.35□□□□□ -1.07
BDNF-210ENST00000438929 CCER2I3L3R5 266 aa8.35□□□□□ -1.07
BDNF-210ENST00000438929 ZNF326Q5BKZ1 582 aaKnown RBP8.35□□□□□ -1.07
BDNF-210ENST00000438929 SALL2Q9Y467 1007 aaPredicted RBP8.35□□□□□ -1.07
BDNF-210ENST00000438929 NESP48681 1621 aa8.35□□□□□ -1.07
BDNF-210ENST00000438929 NEFMP07197 916 aa8.34□□□□□ -1.07
BDNF-210ENST00000438929 VPS8Q8N3P4 1428 aa8.34□□□□□ -1.07
BDNF-210ENST00000438929 RUSC2Q8N2Y8 1516 aa8.34□□□□□ -1.07
BDNF-210ENST00000438929 CEP164Q9UPV0 1460 aa8.33□□□□□ -1.08
BDNF-210ENST00000438929 AEBP2Q6ZN18 517 aaPredicted RBP8.32□□□□□ -1.08
BDNF-210ENST00000438929 TOP2AP11388 1531 aaKnown RBP8.32□□□□□ -1.08
BDNF-210ENST00000438929 KIF21AQ7Z4S6 1674 aa8.31□□□□□ -1.08
BDNF-210ENST00000438929 CCNB3Q8WWL7 1395 aa8.31□□□□□ -1.08
BDNF-210ENST00000438929 ARXQ96QS3 562 aa8.3□□□□□ -1.08
BDNF-210ENST00000438929 FBLN2P98095 1184 aa8.29□□□□□ -1.08
BDNF-210ENST00000438929 RAB3GAP2Q9H2M9 1393 aa8.29□□□□□ -1.08
BDNF-210ENST00000438929 PKNOX2Q96KN3 472 aa8.28□□□□□ -1.08
BDNF-210ENST00000438929 EIF4G2P78344 907 aaKnown RBP eCLIP8.27□□□□□ -1.09
BDNF-210ENST00000438929 PDS5BQ9NTI5 1447 aa8.27□□□□□ -1.09
BDNF-210ENST00000438929 THOC2Q8NI27 1593 aaKnown RBP8.27□□□□□ -1.09
BDNF-210ENST00000438929 PRDM2Q13029 1718 aa8.27□□□□□ -1.09
BDNF-210ENST00000438929 IL27Q8NEV9 243 aa8.27□□□□□ -1.09
BDNF-210ENST00000438929 PAK3O75914 559 aaPredicted RBP8.26□□□□□ -1.09
BDNF-210ENST00000438929 IPO9Q96P70 1041 aaKnown RBP8.26□□□□□ -1.09
BDNF-210ENST00000438929 CHIC2Q9UKJ5 165 aa8.26□□□□□ -1.09
BDNF-210ENST00000438929 ERCC6Q03468 1493 aa8.26□□□□□ -1.09
BDNF-210ENST00000438929 TMC1Q8TDI8 760 aa8.26□□□□□ -1.09
BDNF-210ENST00000438929 PPP1R15AO75807 674 aaPredicted RBP8.25□□□□□ -1.09
BDNF-210ENST00000438929 ERICH6BQ5W0A0 696 aa8.25□□□□□ -1.09
BDNF-210ENST00000438929 UBE2Q2Q8WVN8 375 aa8.24□□□□□ -1.09
BDNF-210ENST00000438929 PPM1GO15355 546 aaPredicted RBP8.24□□□□□ -1.09
BDNF-210ENST00000438929 TRHP20396 242 aaPredicted RBP8.24□□□□□ -1.09
BDNF-210ENST00000438929 GLIPR1L2Q4G1C9 344 aa8.23□□□□□ -1.09
BDNF-210ENST00000438929 LAMC3Q9Y6N6 1575 aa8.23□□□□□ -1.09
BDNF-210ENST00000438929 ARID3CA6NKF2 412 aa8.22□□□□□ -1.09
BDNF-210ENST00000438929 SETD5Q9C0A6 1442 aa8.22□□□□□ -1.09
BDNF-210ENST00000438929 RRP7BPQ9NSQ0 103 aa8.21□□□□□ -1.1
BDNF-210ENST00000438929 TIMELESSQ9UNS1 1208 aa8.21□□□□□ -1.1
BDNF-210ENST00000438929 RAPGEF2Q9Y4G8 1499 aa8.2□□□□□ -1.1
BDNF-210ENST00000438929 HSPA5P11021 654 aaKnown RBP8.2□□□□□ -1.1
BDNF-210ENST00000438929 CFTRP13569 1480 aa8.2□□□□□ -1.1
BDNF-210ENST00000438929 CADPSQ9ULU8 1353 aa8.19□□□□□ -1.1
BDNF-210ENST00000438929 DDRGK1Q96HY6 314 aa8.18□□□□□ -1.1
BDNF-210ENST00000438929 SLC4A3P48751 1232 aa8.14□□□□□ -1.11
BDNF-210ENST00000438929 MTUS2Q5JR59 1369 aa8.14□□□□□ -1.11
BDNF-210ENST00000438929 NAP1L5Q96NT1 182 aaPredicted RBP8.13□□□□□ -1.11
BDNF-210ENST00000438929 BRPF3Q9ULD4 1205 aa8.13□□□□□ -1.11
BDNF-210ENST00000438929 WDR62O43379 1518 aa8.13□□□□□ -1.11
BDNF-210ENST00000438929 RGS3P49796 1198 aa8.13□□□□□ -1.11
BDNF-210ENST00000438929 URB2Q14146 1524 aaKnown RBP8.13□□□□□ -1.11
BDNF-210ENST00000438929 CCDC184Q52MB2 194 aa8.12□□□□□ -1.11
BDNF-210ENST00000438929 PRKRIP1Q9H875 184 aaPredicted RBP8.12□□□□□ -1.11
BDNF-210ENST00000438929 NUDCQ9Y266 331 aa8.12□□□□□ -1.11
BDNF-210ENST00000438929 CANXP27824 592 aaKnown RBP8.12□□□□□ -1.11
BDNF-210ENST00000438929 FOXD1Q16676 465 aa8.12□□□□□ -1.11
BDNF-210ENST00000438929 PDE4AP27815 886 aa8.11□□□□□ -1.11
BDNF-210ENST00000438929 GSE1Q14687 1217 aa8.11□□□□□ -1.11
BDNF-210ENST00000438929 KLHL34Q8N239 644 aa8.11□□□□□ -1.11
BDNF-210ENST00000438929 USP35Q9P2H5 1018 aa8.11□□□□□ -1.11
BDNF-210ENST00000438929 ZBED9Q6R2W3 1325 aa8.11□□□□□ -1.11
BDNF-210ENST00000438929 TCERG1O14776 1098 aaKnown RBP8.11□□□□□ -1.11
BDNF-210ENST00000438929 SENP3Q9H4L4 574 aaPredicted RBP8.11□□□□□ -1.11
BDNF-210ENST00000438929 ESF1Q9H501 851 aaKnown RBP8.11□□□□□ -1.11
BDNF-210ENST00000438929 A0A0U1RQG5 324 aaPredicted RBP8.1□□□□□ -1.11
BDNF-210ENST00000438929 KDM2AQ9Y2K7 1162 aa8.1□□□□□ -1.11
BDNF-210ENST00000438929 ARID4BQ4LE39 1312 aaPredicted RBP8.1□□□□□ -1.11
BDNF-210ENST00000438929 KIF21BO75037 1637 aa8.1□□□□□ -1.11
BDNF-210ENST00000438929 CUX2O14529 1486 aa8.1□□□□□ -1.11
BDNF-210ENST00000438929 PDE4CQ08493 712 aa8.1□□□□□ -1.11
BDNF-210ENST00000438929 NCBP3Q53F19 620 aaKnown RBP8.1□□□□□ -1.11
BDNF-210ENST00000438929 WDR97A6NE52 1622 aa8.1□□□□□ -1.11
BDNF-210ENST00000438929 SLC4A1APQ9BWU0 796 aaKnown RBP8.09□□□□□ -1.11
BDNF-210ENST00000438929 FANCD2Q9BXW9 1451 aa8.09□□□□□ -1.11
BDNF-210ENST00000438929 EXOC6Q8TAG9 804 aa8.08□□□□□ -1.12
BDNF-210ENST00000438929 KIF27Q86VH2 1401 aa8.08□□□□□ -1.12
BDNF-210ENST00000438929 MRC2Q9UBG0 1479 aa8.08□□□□□ -1.12
BDNF-210ENST00000438929 UPF2Q9HAU5 1272 aaKnown RBP8.08□□□□□ -1.12
BDNF-210ENST00000438929 RCAN3Q9UKA8 241 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms