RNA–Protein interactions for RNA: ENST00000438610.5

MTA1-208, Transcript of metastasis associated 1, humanhuman

TSL 1 (best)

Gene MTA1, Length 2,144 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-208ENST00000438610 VPS8Q8N3P4 1428 aa29.13■■■□□ 2.25
MTA1-208ENST00000438610 GRIN2AQ12879 1464 aa29.12■■■□□ 2.25
MTA1-208ENST00000438610 ARAP1Q96P48 1450 aa29.11■■■□□ 2.25
MTA1-208ENST00000438610 CHMP7Q8WUX9 453 aaPredicted RBP29.11■■■□□ 2.25
MTA1-208ENST00000438610 EFCAB5A4FU69 1503 aa29.04■■■□□ 2.24
MTA1-208ENST00000438610 KIAA0586Q9BVV6 1533 aa28.99■■■□□ 2.23
MTA1-208ENST00000438610 FBLN2P98095 1184 aa28.99■■■□□ 2.23
MTA1-208ENST00000438610 IQGAP2Q13576 1575 aa28.98■■■□□ 2.23
MTA1-208ENST00000438610 NUP160Q12769 1436 aa28.94■■■□□ 2.22
MTA1-208ENST00000438610 SAMD9Q5K651 1589 aa28.92■■■□□ 2.22
MTA1-208ENST00000438610 P3H3Q8IVL6 736 aa28.9■■■□□ 2.22
MTA1-208ENST00000438610 CEP170Q5SW79 1584 aa28.9■■■□□ 2.22
MTA1-208ENST00000438610 UGGT2Q9NYU1 1516 aa28.88■■■□□ 2.21
MTA1-208ENST00000438610 APLP2Q06481 763 aa28.87■■■□□ 2.21
MTA1-208ENST00000438610 FHOD3Q2V2M9 1422 aa28.87■■■□□ 2.21
MTA1-208ENST00000438610 TRIM26Q12899 539 aaPredicted RBP28.86■■■□□ 2.21
MTA1-208ENST00000438610 PPARGC1BQ86YN6 1023 aaKnown RBP28.83■■■□□ 2.21
MTA1-208ENST00000438610 PCGF6Q9BYE7 350 aa28.81■■■□□ 2.2
MTA1-208ENST00000438610 FMN1Q68DA7 1419 aa28.8■■■□□ 2.2
MTA1-208ENST00000438610 CHD1O14646 1710 aa28.78■■■□□ 2.2
MTA1-208ENST00000438610 JPH4Q96JJ6 628 aa28.74■■■□□ 2.19
MTA1-208ENST00000438610 CASKIN1Q8WXD9 1431 aa28.72■■■□□ 2.19
MTA1-208ENST00000438610 DISP1Q96F81 1524 aa28.72■■■□□ 2.19
MTA1-208ENST00000438610 MAP3K1Q13233 1512 aa28.69■■■□□ 2.18
MTA1-208ENST00000438610 FYCO1Q9BQS8 1478 aa28.69■■■□□ 2.18
MTA1-208ENST00000438610 KIAA0556O60303 1618 aa28.68■■■□□ 2.18
MTA1-208ENST00000438610 PCF11O94913 1555 aaKnown RBP28.67■■■□□ 2.18
MTA1-208ENST00000438610 CARMIL2Q6F5E8 1435 aa28.65■■■□□ 2.18
MTA1-208ENST00000438610 TTBK1Q5TCY1 1321 aaPredicted RBP28.6■■■□□ 2.17
MTA1-208ENST00000438610 TIAM1Q13009 1591 aa28.58■■■□□ 2.17
MTA1-208ENST00000438610 KANK4Q5T7N3 995 aaPredicted RBP28.58■■■□□ 2.17
MTA1-208ENST00000438610 ATP1B4Q9UN42 357 aaPredicted RBP28.58■■■□□ 2.17
MTA1-208ENST00000438610 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
MTA1-208ENST00000438610 SHROOM2Q13796 1616 aa28.52■■■□□ 2.16
MTA1-208ENST00000438610 CLASP1Q7Z460 1538 aa28.51■■■□□ 2.16
MTA1-208ENST00000438610 CFAP43Q8NDM7 1665 aa28.51■■■□□ 2.15
MTA1-208ENST00000438610 LRRC9Q6ZRR7 1453 aa28.48■■■□□ 2.15
MTA1-208ENST00000438610 HECW1Q76N89 1606 aa28.46■■■□□ 2.15
MTA1-208ENST00000438610 CCDC18Q5T9S5 1454 aa28.43■■■□□ 2.14
MTA1-208ENST00000438610 LRRIQ1Q96JM4 1722 aa28.4■■■□□ 2.14
MTA1-208ENST00000438610 RAPGEF6Q8TEU7 1601 aa28.39■■■□□ 2.13
MTA1-208ENST00000438610 EPRSP07814 1512 aaKnown RBP28.38■■■□□ 2.13
MTA1-208ENST00000438610 OSCARQ8IYS5 282 aa28.37■■■□□ 2.13
MTA1-208ENST00000438610 PTPRGP23470 1445 aa28.36■■■□□ 2.13
MTA1-208ENST00000438610 NUP153P49790 1475 aaKnown RBP28.33■■■□□ 2.13
MTA1-208ENST00000438610 PLB1Q6P1J6 1458 aa28.33■■■□□ 2.13
MTA1-208ENST00000438610 MTUS2Q5JR59 1369 aa28.32■■■□□ 2.12
MTA1-208ENST00000438610 ABCA8O94911 1581 aa28.3■■■□□ 2.12
MTA1-208ENST00000438610 ERCC6L2Q5T890 1561 aa28.28■■■□□ 2.12
MTA1-208ENST00000438610 CDK13Q14004 1512 aaKnown RBP28.26■■■□□ 2.11
MTA1-208ENST00000438610 RRBP1Q9P2E9 1410 aaKnown RBP28.25■■■□□ 2.11
MTA1-208ENST00000438610 EHBP1L1Q8N3D4 1523 aa28.25■■■□□ 2.11
MTA1-208ENST00000438610 CDK11AQ9UQ88 783 aaPredicted RBP28.22■■■□□ 2.11
MTA1-208ENST00000438610 MAGI3Q5TCQ9 1506 aa28.2■■■□□ 2.11
MTA1-208ENST00000438610 PHLDB1Q86UU1 1377 aa28.2■■■□□ 2.11
MTA1-208ENST00000438610 ARID3CA6NKF2 412 aa28.2■■■□□ 2.1
MTA1-208ENST00000438610 UACAQ9BZF9 1416 aa28.19■■■□□ 2.1
MTA1-208ENST00000438610 HRCP23327 699 aa28.18■■■□□ 2.1
MTA1-208ENST00000438610 CCNB3Q8WWL7 1395 aa28.17■■■□□ 2.1
MTA1-208ENST00000438610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.16■■■□□ 2.1
MTA1-208ENST00000438610 HNRNPUL2Q1KMD3 747 aaKnown RBP28.16■■■□□ 2.1
MTA1-208ENST00000438610 SUPT6HQ7KZ85 1726 aaKnown RBP28.16■■■□□ 2.1
MTA1-208ENST00000438610 NCOA2Q15596 1464 aa28.14■■■□□ 2.09
MTA1-208ENST00000438610 ATP10BO94823 1461 aa28.13■■■□□ 2.09
MTA1-208ENST00000438610 ARHGEF11O15085 1522 aa28.11■■■□□ 2.09
MTA1-208ENST00000438610 ABCC2Q92887 1545 aa28.08■■■□□ 2.09
MTA1-208ENST00000438610 TROQ12816 1431 aaPredicted RBP28.08■■■□□ 2.09
MTA1-208ENST00000438610 UHRF1BP1LA0JNW5 1464 aa28.06■■■□□ 2.08
MTA1-208ENST00000438610 PLEKHD1A6NEE1 506 aa28.05■■■□□ 2.08
MTA1-208ENST00000438610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.04■■■□□ 2.086e-8■■■■□ 25.2
MTA1-208ENST00000438610 MYOM3Q5VTT5 1437 aa28.04■■■□□ 2.08
MTA1-208ENST00000438610 FGD6Q6ZV73 1430 aa28.02■■■□□ 2.08
MTA1-208ENST00000438610 ADCY10Q96PN6 1610 aa27.95■■■□□ 2.07
MTA1-208ENST00000438610 FAM50AQ14320 339 aaKnown RBP27.95■■■□□ 2.07
MTA1-208ENST00000438610 MIA2Q96PC5 1412 aa27.93■■■□□ 2.06
MTA1-208ENST00000438610 KDM5BQ9UGL1 1544 aa27.93■■■□□ 2.06
MTA1-208ENST00000438610 KIF14Q15058 1648 aa27.86■■■□□ 2.05
MTA1-208ENST00000438610 TCOF1Q13428 1488 aaKnown RBP27.86■■■□□ 2.05
MTA1-208ENST00000438610 PTPN23Q9H3S7 1636 aa27.86■■■□□ 2.05
MTA1-208ENST00000438610 ZCCHC11Q5TAX3 1644 aaKnown RBP27.85■■■□□ 2.05
MTA1-208ENST00000438610 ITGAEP38570 1179 aa27.85■■■□□ 2.05
MTA1-208ENST00000438610 ABCC10Q5T3U5 1492 aa27.83■■■□□ 2.04
MTA1-208ENST00000438610 ZEB1P37275 1124 aaPredicted RBP27.82■■■□□ 2.04
MTA1-208ENST00000438610 GPATCH8Q9UKJ3 1502 aaKnown RBP27.82■■■□□ 2.04
MTA1-208ENST00000438610 ITSN2Q9NZM3 1697 aa27.78■■■□□ 2.04
MTA1-208ENST00000438610 CFDP1Q9UEE9 299 aaPredicted RBP27.77■■■□□ 2.04
MTA1-208ENST00000438610 NPM1P06748 294 aaKnown RBP eCLIP27.7■■■□□ 2.03
MTA1-208ENST00000438610 CDC42BPAQ5VT25 1732 aa27.7■■■□□ 2.02
MTA1-208ENST00000438610 CCER1Q8TC90 406 aaPredicted RBP27.7■■■□□ 2.02
MTA1-208ENST00000438610 PTPRKQ15262 1439 aa27.68■■■□□ 2.02
MTA1-208ENST00000438610 KCNH8Q96L42 1107 aa27.68■■■□□ 2.02
MTA1-208ENST00000438610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.67■■■□□ 2.022e-6■■■■■ 27.6
MTA1-208ENST00000438610 ZNF644Q9H582 1327 aaPredicted RBP27.67■■■□□ 2.02
MTA1-208ENST00000438610 RIMBP3CA6NJZ7 1639 aa27.66■■■□□ 2.02
MTA1-208ENST00000438610 RIMBP3BA6NNM3 1639 aa27.66■■■□□ 2.02
MTA1-208ENST00000438610 RIMBP3Q9UFD9 1639 aa27.66■■■□□ 2.02
MTA1-208ENST00000438610 SETD5Q9C0A6 1442 aa27.66■■■□□ 2.02
MTA1-208ENST00000438610 WDR7Q9Y4E6 1490 aa27.65■■■□□ 2.02
MTA1-208ENST00000438610 CAMSAP2Q08AD1 1489 aa27.64■■■□□ 2.02
MTA1-208ENST00000438610 TTC37Q6PGP7 1564 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms