RNA–Protein interactions for RNA: ENST00000438166.6

GPD2-208, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPD2, Length 2,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-208ENST00000438166 TIAM1Q13009 1591 aa22.92■■□□□ 1.26
GPD2-208ENST00000438166 ATP1B4Q9UN42 357 aaPredicted RBP22.91■■□□□ 1.26
GPD2-208ENST00000438166 PCF11O94913 1555 aaKnown RBP22.89■■□□□ 1.26
GPD2-208ENST00000438166 RRBP1Q9P2E9 1410 aaKnown RBP22.89■■□□□ 1.25
GPD2-208ENST00000438166 MRC2Q9UBG0 1479 aa22.88■■□□□ 1.25
GPD2-208ENST00000438166 AQRO60306 1485 aaKnown RBP eCLIP22.86■■□□□ 1.25
GPD2-208ENST00000438166 FHAD1B1AJZ9 1412 aa22.85■■□□□ 1.25
GPD2-208ENST00000438166 ITGAEP38570 1179 aa22.84■■□□□ 1.25
GPD2-208ENST00000438166 CCNB3Q8WWL7 1395 aa22.84■■□□□ 1.25
GPD2-208ENST00000438166 LRRC9Q6ZRR7 1453 aa22.83■■□□□ 1.24
GPD2-208ENST00000438166 EFCAB5A4FU69 1503 aa22.81■■□□□ 1.24
GPD2-208ENST00000438166 MAP3K1Q13233 1512 aa22.81■■□□□ 1.24
GPD2-208ENST00000438166 CFAP43Q8NDM7 1665 aa22.77■■□□□ 1.24
GPD2-208ENST00000438166 ZNF608Q9ULD9 1512 aaPredicted RBP22.77■■□□□ 1.24
GPD2-208ENST00000438166 PHLDB1Q86UU1 1377 aa22.77■■□□□ 1.24
GPD2-208ENST00000438166 PBRM1Q86U86 1689 aa22.76■■□□□ 1.23
GPD2-208ENST00000438166 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
GPD2-208ENST00000438166 FYCO1Q9BQS8 1478 aa22.73■■□□□ 1.23
GPD2-208ENST00000438166 CASKIN1Q8WXD9 1431 aa22.73■■□□□ 1.23
GPD2-208ENST00000438166 WDR62O43379 1518 aa22.72■■□□□ 1.23
GPD2-208ENST00000438166 DHX57Q6P158 1386 aaKnown RBP22.72■■□□□ 1.23
GPD2-208ENST00000438166 SAMD9Q5K651 1589 aa22.7■■□□□ 1.22
GPD2-208ENST00000438166 SNAPC4Q5SXM2 1469 aa22.68■■□□□ 1.22
GPD2-208ENST00000438166 FMN1Q68DA7 1419 aa22.67■■□□□ 1.22
GPD2-208ENST00000438166 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
GPD2-208ENST00000438166 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
GPD2-208ENST00000438166 IFT140Q96RY7 1462 aa22.65■■□□□ 1.22
GPD2-208ENST00000438166 ADAMTS12P58397 1594 aa22.64■■□□□ 1.22
GPD2-208ENST00000438166 GRIN2BQ13224 1484 aa22.64■■□□□ 1.21
GPD2-208ENST00000438166 LRRIQ1Q96JM4 1722 aa22.64■■□□□ 1.21
GPD2-208ENST00000438166 ZNF316A6NFI3 1004 aaPredicted RBP22.62■■□□□ 1.21
GPD2-208ENST00000438166 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
GPD2-208ENST00000438166 RAB3GAP2Q9H2M9 1393 aa22.58■■□□□ 1.2
GPD2-208ENST00000438166 EIF4G3O43432 1585 aaKnown RBP22.56■■□□□ 1.2
GPD2-208ENST00000438166 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
GPD2-208ENST00000438166 MTUS2Q5JR59 1369 aa22.54■■□□□ 1.2
GPD2-208ENST00000438166 CLSPNQ9HAW4 1339 aa22.52■■□□□ 1.2
GPD2-208ENST00000438166 SETD5Q9C0A6 1442 aa22.48■■□□□ 1.19
GPD2-208ENST00000438166 ARID3CA6NKF2 412 aa22.48■■□□□ 1.19
GPD2-208ENST00000438166 FGD6Q6ZV73 1430 aa22.46■■□□□ 1.19
GPD2-208ENST00000438166 MAGI3Q5TCQ9 1506 aa22.44■■□□□ 1.18
GPD2-208ENST00000438166 FBLN2P98095 1184 aa22.44■■□□□ 1.18
GPD2-208ENST00000438166 NCOA2Q15596 1464 aa22.43■■□□□ 1.18
GPD2-208ENST00000438166 GRIN2AQ12879 1464 aa22.42■■□□□ 1.18
GPD2-208ENST00000438166 MAPKBP1O60336 1514 aa22.42■■□□□ 1.18
GPD2-208ENST00000438166 CHMP7Q8WUX9 453 aaPredicted RBP22.39■■□□□ 1.17
GPD2-208ENST00000438166 UGGT2Q9NYU1 1516 aa22.39■■□□□ 1.17
GPD2-208ENST00000438166 CDK13Q14004 1512 aaKnown RBP22.38■■□□□ 1.17
GPD2-208ENST00000438166 SUPT6HQ7KZ85 1726 aaKnown RBP22.38■■□□□ 1.17
GPD2-208ENST00000438166 EHBP1L1Q8N3D4 1523 aa22.37■■□□□ 1.17
GPD2-208ENST00000438166 KIAA0586Q9BVV6 1533 aa22.37■■□□□ 1.17
GPD2-208ENST00000438166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.37■■□□□ 1.17
GPD2-208ENST00000438166 HECW1Q76N89 1606 aa22.36■■□□□ 1.17
GPD2-208ENST00000438166 PTPRKQ15262 1439 aa22.36■■□□□ 1.17
GPD2-208ENST00000438166 EPRSP07814 1512 aaKnown RBP22.36■■□□□ 1.17
GPD2-208ENST00000438166 MYOM3Q5VTT5 1437 aa22.35■■□□□ 1.17
GPD2-208ENST00000438166 DISP1Q96F81 1524 aa22.35■■□□□ 1.17
GPD2-208ENST00000438166 CCDC18Q5T9S5 1454 aa22.35■■□□□ 1.17
GPD2-208ENST00000438166 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
GPD2-208ENST00000438166 KIAA0556O60303 1618 aa22.32■■□□□ 1.16
GPD2-208ENST00000438166 CEP170Q5SW79 1584 aa22.31■■□□□ 1.16
GPD2-208ENST00000438166 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
GPD2-208ENST00000438166 SIN3AQ96ST3 1273 aa22.31■■□□□ 1.16
GPD2-208ENST00000438166 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
GPD2-208ENST00000438166 MIER1Q8N108 512 aa22.28■■□□□ 1.16
GPD2-208ENST00000438166 PTPN23Q9H3S7 1636 aa22.27■■□□□ 1.16
GPD2-208ENST00000438166 NEUROD1Q13562 356 aa22.27■■□□□ 1.16
GPD2-208ENST00000438166 NUP153P49790 1475 aaKnown RBP22.22■■□□□ 1.15
GPD2-208ENST00000438166 CHIC2Q9UKJ5 165 aa22.21■■□□□ 1.15
GPD2-208ENST00000438166 SCAF1Q9H7N4 1312 aaKnown RBP22.21■■□□□ 1.15
GPD2-208ENST00000438166 HFM1A2PYH4 1435 aa22.2■■□□□ 1.14
GPD2-208ENST00000438166 RAPGEF6Q8TEU7 1601 aa22.19■■□□□ 1.14
GPD2-208ENST00000438166 NAIPQ13075 1403 aa22.18■■□□□ 1.14
GPD2-208ENST00000438166 JPH4Q96JJ6 628 aa22.18■■□□□ 1.14
GPD2-208ENST00000438166 NUP160Q12769 1436 aa22.18■■□□□ 1.14
GPD2-208ENST00000438166 RRP7BPQ9NSQ0 103 aa22.17■■□□□ 1.14
GPD2-208ENST00000438166 PLB1Q6P1J6 1458 aa22.15■■□□□ 1.14
GPD2-208ENST00000438166 YTHDC1Q96MU7 727 aaKnown RBP22.15■■□□□ 1.14
GPD2-208ENST00000438166 TCOF1Q13428 1488 aaKnown RBP22.14■■□□□ 1.14
GPD2-208ENST00000438166 ACIN1Q9UKV3 1341 aaKnown RBP22.13■■□□□ 1.13
GPD2-208ENST00000438166 UACAQ9BZF9 1416 aa22.09■■□□□ 1.13
GPD2-208ENST00000438166 ZNF644Q9H582 1327 aaPredicted RBP22.09■■□□□ 1.13
GPD2-208ENST00000438166 PRG4Q92954 1404 aaPredicted RBP22.08■■□□□ 1.13
GPD2-208ENST00000438166 MIA2Q96PC5 1412 aa22.08■■□□□ 1.12
GPD2-208ENST00000438166 KDM6BO15054 1643 aa22.07■■□□□ 1.12
GPD2-208ENST00000438166 CARMIL2Q6F5E8 1435 aa22.05■■□□□ 1.12
GPD2-208ENST00000438166 CENPBP07199 599 aaPredicted RBP22.03■■□□□ 1.12
GPD2-208ENST00000438166 CDK11AQ9UQ88 783 aaPredicted RBP22.03■■□□□ 1.12
GPD2-208ENST00000438166 GCC2Q8IWJ2 1684 aa22.01■■□□□ 1.11
GPD2-208ENST00000438166 CHD1O14646 1710 aa22■■□□□ 1.11
GPD2-208ENST00000438166 KIF14Q15058 1648 aa21.99■■□□□ 1.11
GPD2-208ENST00000438166 TROQ12816 1431 aaPredicted RBP21.99■■□□□ 1.11
GPD2-208ENST00000438166 PPP1R15AO75807 674 aaPredicted RBP21.99■■□□□ 1.11
GPD2-208ENST00000438166 TRIM52Q96A61 297 aa21.99■■□□□ 1.11
GPD2-208ENST00000438166 HIRIP3Q9BW71 556 aaPredicted RBP21.98■■□□□ 1.11
GPD2-208ENST00000438166 DAPK1P53355 1430 aa21.97■■□□□ 1.11
GPD2-208ENST00000438166 ABCC5O15440 1437 aa21.96■■□□□ 1.11
GPD2-208ENST00000438166 DENND4BO75064 1496 aaPredicted RBP21.96■■□□□ 1.11
GPD2-208ENST00000438166 TIMELESSQ9UNS1 1208 aa21.96■■□□□ 1.11
GPD2-208ENST00000438166 TONSLQ96HA7 1378 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms