RNA–Protein interactions for RNA: ENST00000438023.5

KDM4C-206, Transcript of lysine demethylase 4C, humanhuman

TSL 5

Gene KDM4C, Length 4,022 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-206ENST00000438023 CECR2Q9BXF3 1484 aa18.06■□□□□ 0.48
KDM4C-206ENST00000438023 TRIM44Q96DX7 344 aaPredicted RBP18.03■□□□□ 0.48
KDM4C-206ENST00000438023 DDRGK1Q96HY6 314 aa18.03■□□□□ 0.48
KDM4C-206ENST00000438023 TIMELESSQ9UNS1 1208 aa18.02■□□□□ 0.48
KDM4C-206ENST00000438023 CLIP1P30622 1438 aa18.02■□□□□ 0.47
KDM4C-206ENST00000438023 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.47
KDM4C-206ENST00000438023 GOLGA3Q08378 1498 aa18■□□□□ 0.47
KDM4C-206ENST00000438023 CANXP27824 592 aaKnown RBP17.99■□□□□ 0.47
KDM4C-206ENST00000438023 HSP90AA1P07900 732 aaKnown RBP17.97■□□□□ 0.47
KDM4C-206ENST00000438023 TONSLQ96HA7 1378 aa17.97■□□□□ 0.47
KDM4C-206ENST00000438023 UPF2Q9HAU5 1272 aaKnown RBP17.97■□□□□ 0.47
KDM4C-206ENST00000438023 ABCC8Q09428 1581 aa17.95■□□□□ 0.46
KDM4C-206ENST00000438023 EEA1Q15075 1411 aa17.95■□□□□ 0.46
KDM4C-206ENST00000438023 TNNT2P45379 298 aaPredicted RBP17.95■□□□□ 0.46
KDM4C-206ENST00000438023 MROH2BQ7Z745 1585 aa17.95■□□□□ 0.46
KDM4C-206ENST00000438023 PKNOX2Q96KN3 472 aa17.94■□□□□ 0.46
KDM4C-206ENST00000438023 FANCIQ9NVI1 1328 aa17.9■□□□□ 0.46
KDM4C-206ENST00000438023 IL27Q8NEV9 243 aa17.9■□□□□ 0.46
KDM4C-206ENST00000438023 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
KDM4C-206ENST00000438023 AMER1Q5JTC6 1135 aaPredicted RBP17.89■□□□□ 0.45
KDM4C-206ENST00000438023 IPO9Q96P70 1041 aaKnown RBP17.88■□□□□ 0.45
KDM4C-206ENST00000438023 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
KDM4C-206ENST00000438023 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
KDM4C-206ENST00000438023 DHX57Q6P158 1386 aaKnown RBP17.86■□□□□ 0.45
KDM4C-206ENST00000438023 HSP90AA2PQ14568 343 aaPredicted RBP17.85■□□□□ 0.45
KDM4C-206ENST00000438023 RSPH6AQ9H0K4 717 aa17.84■□□□□ 0.45
KDM4C-206ENST00000438023 RUSC2Q8N2Y8 1516 aa17.83■□□□□ 0.44
KDM4C-206ENST00000438023 VPS8Q8N3P4 1428 aa17.82■□□□□ 0.44
KDM4C-206ENST00000438023 WIZO95785 1651 aa17.81■□□□□ 0.44
KDM4C-206ENST00000438023 ARID3AQ99856 593 aa17.81■□□□□ 0.44
KDM4C-206ENST00000438023 BECN1Q14457 450 aa17.8■□□□□ 0.44
KDM4C-206ENST00000438023 CEP164Q9UPV0 1460 aa17.78■□□□□ 0.44
KDM4C-206ENST00000438023 CDK11BP21127 795 aaKnown RBP17.78■□□□□ 0.44
KDM4C-206ENST00000438023 A0A0U1RQG5 324 aaPredicted RBP17.77■□□□□ 0.44
KDM4C-206ENST00000438023 PODXL2Q9NZ53 605 aa17.76■□□□□ 0.43
KDM4C-206ENST00000438023 MSH5O43196 834 aa17.76■□□□□ 0.43
KDM4C-206ENST00000438023 SIN3AQ96ST3 1273 aa17.74■□□□□ 0.43
KDM4C-206ENST00000438023 RGS3P49796 1198 aa17.72■□□□□ 0.43
KDM4C-206ENST00000438023 CCER2I3L3R5 266 aa17.72■□□□□ 0.43
KDM4C-206ENST00000438023 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.72■□□□□ 0.43
KDM4C-206ENST00000438023 L1TD1Q5T7N2 865 aaKnown RBP17.71■□□□□ 0.43
KDM4C-206ENST00000438023 KANK4Q5T7N3 995 aaPredicted RBP17.71■□□□□ 0.43
KDM4C-206ENST00000438023 DNTTIP2Q5QJE6 756 aaKnown RBP17.7■□□□□ 0.42
KDM4C-206ENST00000438023 GSE1Q14687 1217 aa17.69■□□□□ 0.42
KDM4C-206ENST00000438023 USP35Q9P2H5 1018 aa17.68■□□□□ 0.42
KDM4C-206ENST00000438023 EIF4G2P78344 907 aaKnown RBP eCLIP17.66■□□□□ 0.42
KDM4C-206ENST00000438023 P3H3Q8IVL6 736 aa17.66■□□□□ 0.42
KDM4C-206ENST00000438023 GZF1Q9H116 711 aaPredicted RBP17.65■□□□□ 0.42
KDM4C-206ENST00000438023 BRPF3Q9ULD4 1205 aa17.65■□□□□ 0.42
KDM4C-206ENST00000438023 NCLP19338 710 aaKnown RBP17.63■□□□□ 0.41
KDM4C-206ENST00000438023 PAK3O75914 559 aaPredicted RBP17.62■□□□□ 0.41
KDM4C-206ENST00000438023 UBE2Q2Q8WVN8 375 aa17.62■□□□□ 0.41
KDM4C-206ENST00000438023 CCNB3Q8WWL7 1395 aa17.61■□□□□ 0.41
KDM4C-206ENST00000438023 PTMAP06454 111 aaKnown RBP17.61■□□□□ 0.41
KDM4C-206ENST00000438023 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
KDM4C-206ENST00000438023 SLKQ9H2G2 1235 aaPredicted RBP17.59■□□□□ 0.41
KDM4C-206ENST00000438023 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
KDM4C-206ENST00000438023 RAB3GAP2Q9H2M9 1393 aa17.57■□□□□ 0.4
KDM4C-206ENST00000438023 SPRYD3Q8NCJ5 442 aa17.56■□□□□ 0.4
KDM4C-206ENST00000438023 GOLGA6L22H0YM25 854 aa17.56■□□□□ 0.4
KDM4C-206ENST00000438023 MSNP26038 577 aaKnown RBP17.56■□□□□ 0.4
KDM4C-206ENST00000438023 TCERG1O14776 1098 aaKnown RBP17.55■□□□□ 0.4
KDM4C-206ENST00000438023 RAPGEF2Q9Y4G8 1499 aa17.52■□□□□ 0.4
KDM4C-206ENST00000438023 PABPN1Q86U42 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
KDM4C-206ENST00000438023 ZBTB7CA1YPR0 619 aa17.51■□□□□ 0.39
KDM4C-206ENST00000438023 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
KDM4C-206ENST00000438023 GOLGA6L3A6NEY3 463 aa17.49■□□□□ 0.39
KDM4C-206ENST00000438023 TOP2AP11388 1531 aaKnown RBP17.48■□□□□ 0.39
KDM4C-206ENST00000438023 CHIC2Q9UKJ5 165 aa17.46■□□□□ 0.39
KDM4C-206ENST00000438023 MYH16Q9H6N6 1097 aa17.46■□□□□ 0.39
KDM4C-206ENST00000438023 PDE4AP27815 886 aa17.45■□□□□ 0.38
KDM4C-206ENST00000438023 SETD5Q9C0A6 1442 aa17.44■□□□□ 0.38
KDM4C-206ENST00000438023 WDR43Q15061 677 aaKnown RBP eCLIP17.43■□□□□ 0.38
KDM4C-206ENST00000438023 NACADO15069 1562 aa17.42■□□□□ 0.38
KDM4C-206ENST00000438023 KIF21BO75037 1637 aa17.42■□□□□ 0.38
KDM4C-206ENST00000438023 FRAT1Q92837 279 aaPredicted RBP17.41■□□□□ 0.38
KDM4C-206ENST00000438023 TPRNQ4KMQ1 711 aa17.4■□□□□ 0.38
KDM4C-206ENST00000438023 PLCB2Q00722 1185 aa17.4■□□□□ 0.38
KDM4C-206ENST00000438023 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
KDM4C-206ENST00000438023 NFKBIBQ15653 356 aa17.39■□□□□ 0.37
KDM4C-206ENST00000438023 ARID3CA6NKF2 412 aa17.38■□□□□ 0.37
KDM4C-206ENST00000438023 SMARCA2P51531 1590 aa17.37■□□□□ 0.37
KDM4C-206ENST00000438023 FAM13BQ9NYF5 915 aa17.36■□□□□ 0.37
KDM4C-206ENST00000438023 ZMYND15Q9H091 742 aa17.35■□□□□ 0.37
KDM4C-206ENST00000438023 KDM2AQ9Y2K7 1162 aa17.34■□□□□ 0.37
KDM4C-206ENST00000438023 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
KDM4C-206ENST00000438023 RCAN3Q9UKA8 241 aa17.32■□□□□ 0.36
KDM4C-206ENST00000438023 HSP90AB1P08238 724 aaKnown RBP17.32■□□□□ 0.36
KDM4C-206ENST00000438023 RRBP1Q9P2E9 1410 aaKnown RBP17.31■□□□□ 0.36
KDM4C-206ENST00000438023 WDR97A6NE52 1622 aa17.3■□□□□ 0.36
KDM4C-206ENST00000438023 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
KDM4C-206ENST00000438023 FAM43AQ8N2R8 423 aa17.29■□□□□ 0.36
KDM4C-206ENST00000438023 RRP7BPQ9NSQ0 103 aa17.28■□□□□ 0.36
KDM4C-206ENST00000438023 HSCBQ8IWL3 235 aa17.28■□□□□ 0.36
KDM4C-206ENST00000438023 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
KDM4C-206ENST00000438023 TNNT3P45378 269 aaPredicted RBP17.25■□□□□ 0.35
KDM4C-206ENST00000438023 SLC24A1O60721 1099 aa17.25■□□□□ 0.35
KDM4C-206ENST00000438023 CHAF1AQ13111 956 aaPredicted RBP17.25■□□□□ 0.35
KDM4C-206ENST00000438023 EXOC6Q8TAG9 804 aa17.24■□□□□ 0.35
KDM4C-206ENST00000438023 FRAT2O75474 233 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms