RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 CEP170Q5SW79 1584 aa34.31■■■■□ 3.08
YBX1-203ENST00000436427 RANGAP1P46060 587 aaPredicted RBP34.3■■■■□ 3.08
YBX1-203ENST00000436427 CEP162Q5TB80 1403 aa34.28■■■■□ 3.08
YBX1-203ENST00000436427 NUP160Q12769 1436 aa34.28■■■■□ 3.08
YBX1-203ENST00000436427 KIAA0586Q9BVV6 1533 aa34.22■■■■□ 3.07
YBX1-203ENST00000436427 IQGAP2Q13576 1575 aa34.21■■■■□ 3.07
YBX1-203ENST00000436427 CLIP1P30622 1438 aa34.18■■■■□ 3.06
YBX1-203ENST00000436427 ARHGAP35Q9NRY4 1499 aa34.02■■■■□ 3.04
YBX1-203ENST00000436427 CLASP1Q7Z460 1538 aa34.01■■■■□ 3.04
YBX1-203ENST00000436427 UGGT2Q9NYU1 1516 aa34.01■■■■□ 3.04
YBX1-203ENST00000436427 OSCARQ8IYS5 282 aa34.01■■■■□ 3.04
YBX1-203ENST00000436427 EFCAB5A4FU69 1503 aa34.01■■■■□ 3.03
YBX1-203ENST00000436427 JPH4Q96JJ6 628 aa33.99■■■■□ 3.03
YBX1-203ENST00000436427 SAMD9Q5K651 1589 aa33.97■■■■□ 3.03
YBX1-203ENST00000436427 P3H3Q8IVL6 736 aa33.96■■■■□ 3.03
YBX1-203ENST00000436427 ARAP1Q96P48 1450 aa33.92■■■■□ 3.02
YBX1-203ENST00000436427 SHROOM2Q13796 1616 aa33.9■■■■□ 3.02
YBX1-203ENST00000436427 DISP1Q96F81 1524 aa33.89■■■■□ 3.02
YBX1-203ENST00000436427 FHOD3Q2V2M9 1422 aa33.89■■■■□ 3.02
YBX1-203ENST00000436427 KIAA0556O60303 1618 aa33.88■■■■□ 3.01
YBX1-203ENST00000436427 CARMIL2Q6F5E8 1435 aa33.85■■■■□ 3.01
YBX1-203ENST00000436427 PRG4Q92954 1404 aaPredicted RBP33.85■■■■□ 3.01
YBX1-203ENST00000436427 VPS8Q8N3P4 1428 aa33.77■■■■□ 3
YBX1-203ENST00000436427 TTBK1Q5TCY1 1321 aaPredicted RBP33.72■■■□□ 2.99
YBX1-203ENST00000436427 ERCC6L2Q5T890 1561 aa33.71■■■□□ 2.99
YBX1-203ENST00000436427 FMN1Q68DA7 1419 aa33.7■■■□□ 2.99
YBX1-203ENST00000436427 PCF11O94913 1555 aaKnown RBP33.59■■■□□ 2.97
YBX1-203ENST00000436427 PTPRGP23470 1445 aa33.57■■■□□ 2.96
YBX1-203ENST00000436427 ATP1B4Q9UN42 357 aaPredicted RBP33.54■■■□□ 2.96
YBX1-203ENST00000436427 CASKIN1Q8WXD9 1431 aa33.54■■■□□ 2.96
YBX1-203ENST00000436427 FYCO1Q9BQS8 1478 aa33.53■■■□□ 2.96
YBX1-203ENST00000436427 RAPGEF6Q8TEU7 1601 aa33.47■■■□□ 2.95
YBX1-203ENST00000436427 PLB1Q6P1J6 1458 aa33.47■■■□□ 2.95
YBX1-203ENST00000436427 ARHGEF11O15085 1522 aa33.46■■■□□ 2.95
YBX1-203ENST00000436427 APLP2Q06481 763 aa33.46■■■□□ 2.95
YBX1-203ENST00000436427 HECW1Q76N89 1606 aa33.44■■■□□ 2.94
YBX1-203ENST00000436427 ABCA8O94911 1581 aa33.41■■■□□ 2.94
YBX1-203ENST00000436427 UACAQ9BZF9 1416 aa33.36■■■□□ 2.93
YBX1-203ENST00000436427 RIMBP3CA6NJZ7 1639 aa33.36■■■□□ 2.93
YBX1-203ENST00000436427 RIMBP3BA6NNM3 1639 aa33.36■■■□□ 2.93
YBX1-203ENST00000436427 RIMBP3Q9UFD9 1639 aa33.36■■■□□ 2.93
YBX1-203ENST00000436427 NUP153P49790 1475 aaKnown RBP33.35■■■□□ 2.93
YBX1-203ENST00000436427 LRRIQ1Q96JM4 1722 aa33.34■■■□□ 2.93
YBX1-203ENST00000436427 ARID3CA6NKF2 412 aa33.33■■■□□ 2.93
YBX1-203ENST00000436427 TIAM1Q13009 1591 aa33.31■■■□□ 2.92
YBX1-203ENST00000436427 PPARGC1BQ86YN6 1023 aaKnown RBP33.31■■■□□ 2.92
YBX1-203ENST00000436427 CCDC18Q5T9S5 1454 aa33.3■■■□□ 2.92
YBX1-203ENST00000436427 EPRSP07814 1512 aaKnown RBP33.3■■■□□ 2.92
YBX1-203ENST00000436427 CFAP43Q8NDM7 1665 aa33.29■■■□□ 2.92
YBX1-203ENST00000436427 ABCC2Q92887 1545 aa33.29■■■□□ 2.92
YBX1-203ENST00000436427 MAP3K1Q13233 1512 aa33.28■■■□□ 2.92
YBX1-203ENST00000436427 CDK13Q14004 1512 aaKnown RBP33.26■■■□□ 2.91
YBX1-203ENST00000436427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.23■■■□□ 2.91
YBX1-203ENST00000436427 HNRNPUL2Q1KMD3 747 aaKnown RBP33.23■■■□□ 2.91
YBX1-203ENST00000436427 UHRF1BP1LA0JNW5 1464 aa33.22■■■□□ 2.91
YBX1-203ENST00000436427 KANK4Q5T7N3 995 aaPredicted RBP33.19■■■□□ 2.9
YBX1-203ENST00000436427 ADCY10Q96PN6 1610 aa33.19■■■□□ 2.9
YBX1-203ENST00000436427 ATP10BO94823 1461 aa33.16■■■□□ 2.9
YBX1-203ENST00000436427 LRRC9Q6ZRR7 1453 aa33.15■■■□□ 2.9
YBX1-203ENST00000436427 CYB5RLQ6IPT4 315 aa33.15■■■□□ 2.9
YBX1-203ENST00000436427 MTUS2Q5JR59 1369 aa33.11■■■□□ 2.89
YBX1-203ENST00000436427 KDM5BQ9UGL1 1544 aa33.08■■■□□ 2.89
YBX1-203ENST00000436427 CDK11AQ9UQ88 783 aaPredicted RBP33.08■■■□□ 2.89
YBX1-203ENST00000436427 ZCCHC11Q5TAX3 1644 aaKnown RBP33.08■■■□□ 2.89
YBX1-203ENST00000436427 MAGI3Q5TCQ9 1506 aa33.06■■■□□ 2.88
YBX1-203ENST00000436427 EHBP1L1Q8N3D4 1523 aa33.05■■■□□ 2.88
YBX1-203ENST00000436427 PLEKHD1A6NEE1 506 aa33■■■□□ 2.87
YBX1-203ENST00000436427 NPM1P06748 294 aaKnown RBP eCLIP32.99■■■□□ 2.87
YBX1-203ENST00000436427 TROQ12816 1431 aaPredicted RBP32.96■■■□□ 2.87
YBX1-203ENST00000436427 DNAJC5Q9H3Z4 198 aa32.95■■■□□ 2.87
YBX1-203ENST00000436427 SUPT6HQ7KZ85 1726 aaKnown RBP32.93■■■□□ 2.86
YBX1-203ENST00000436427 NCOA2Q15596 1464 aa32.88■■■□□ 2.85
YBX1-203ENST00000436427 KIF14Q15058 1648 aa32.85■■■□□ 2.85
YBX1-203ENST00000436427 ASXL2Q76L83 1435 aa32.82■■■□□ 2.85
YBX1-203ENST00000436427 WDR7Q9Y4E6 1490 aa32.82■■■□□ 2.84
YBX1-203ENST00000436427 PHLDB1Q86UU1 1377 aa32.8■■■□□ 2.84
YBX1-203ENST00000436427 KCNH8Q96L42 1107 aa32.79■■■□□ 2.84
YBX1-203ENST00000436427 MAPKBP1O60336 1514 aa32.73■■■□□ 2.83
YBX1-203ENST00000436427 TRIM26Q12899 539 aaPredicted RBP32.73■■■□□ 2.83
YBX1-203ENST00000436427 CCNB3Q8WWL7 1395 aa32.72■■■□□ 2.83
YBX1-203ENST00000436427 MYOM3Q5VTT5 1437 aa32.7■■■□□ 2.82
YBX1-203ENST00000436427 ABCC10Q5T3U5 1492 aa32.7■■■□□ 2.82
YBX1-203ENST00000436427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.67■■■□□ 2.82
YBX1-203ENST00000436427 TTC37Q6PGP7 1564 aa32.66■■■□□ 2.82
YBX1-203ENST00000436427 FGD6Q6ZV73 1430 aa32.63■■■□□ 2.81
YBX1-203ENST00000436427 RRBP1Q9P2E9 1410 aaKnown RBP32.63■■■□□ 2.81
YBX1-203ENST00000436427 ITSN2Q9NZM3 1697 aa32.62■■■□□ 2.81
YBX1-203ENST00000436427 GPATCH8Q9UKJ3 1502 aaKnown RBP32.62■■■□□ 2.81
YBX1-203ENST00000436427 CDC42BPAQ5VT25 1732 aa32.59■■■□□ 2.81
YBX1-203ENST00000436427 ABCA9Q8IUA7 1624 aa32.56■■■□□ 2.8
YBX1-203ENST00000436427 MIA2Q96PC5 1412 aa32.56■■■□□ 2.8
YBX1-203ENST00000436427 PCGF6Q9BYE7 350 aa32.55■■■□□ 2.8
YBX1-203ENST00000436427 MYO5CQ9NQX4 1742 aa32.55■■■□□ 2.8
YBX1-203ENST00000436427 CFDP1Q9UEE9 299 aaPredicted RBP32.55■■■□□ 2.8
YBX1-203ENST00000436427 PREX2Q70Z35 1606 aa32.54■■■□□ 2.8
YBX1-203ENST00000436427 FAM50AQ14320 339 aaKnown RBP32.53■■■□□ 2.8
YBX1-203ENST00000436427 PTPN23Q9H3S7 1636 aa32.53■■■□□ 2.8
YBX1-203ENST00000436427 CDC42BPBQ9Y5S2 1711 aa32.49■■■□□ 2.79
YBX1-203ENST00000436427 ARHGAP5Q13017 1502 aa32.48■■■□□ 2.79
YBX1-203ENST00000436427 ZNF777Q9ULD5 760 aaPredicted RBP32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms