RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 SCRIBQ14160 1630 aa29.76■■■□□ 2.35
TOP2B-204ENST00000435706 ERICH6BQ5W0A0 696 aa29.72■■■□□ 2.35
TOP2B-204ENST00000435706 LAS1LQ9Y4W2 734 aaKnown RBP29.69■■■□□ 2.34
TOP2B-204ENST00000435706 KDM2AQ9Y2K7 1162 aa29.63■■■□□ 2.33
TOP2B-204ENST00000435706 DEKP35659 375 aaKnown RBP29.62■■■□□ 2.33
TOP2B-204ENST00000435706 RBM19Q9Y4C8 960 aaKnown RBP29.62■■■□□ 2.33
TOP2B-204ENST00000435706 GOLGA3Q08378 1498 aa29.61■■■□□ 2.33
TOP2B-204ENST00000435706 MTUS2Q5JR59 1369 aa29.58■■■□□ 2.33
TOP2B-204ENST00000435706 EEA1Q15075 1411 aa29.55■■■□□ 2.32
TOP2B-204ENST00000435706 NAP1L5Q96NT1 182 aaPredicted RBP29.54■■■□□ 2.32
TOP2B-204ENST00000435706 GOLGA6L22H0YM25 854 aa29.53■■■□□ 2.32
TOP2B-204ENST00000435706 SENP3-EIF4A1A0A087X0R7 540 aa29.52■■■□□ 2.32
TOP2B-204ENST00000435706 CHGAP10645 457 aaKnown RBP29.52■■■□□ 2.32
TOP2B-204ENST00000435706 B4GALNT3Q6L9W6 998 aa29.51■■■□□ 2.31
TOP2B-204ENST00000435706 TNIKQ9UKE5 1360 aa29.47■■■□□ 2.31
TOP2B-204ENST00000435706 RRP7BPQ9NSQ0 103 aa29.47■■■□□ 2.31
TOP2B-204ENST00000435706 TNNT2P45379 298 aaPredicted RBP29.46■■■□□ 2.31
TOP2B-204ENST00000435706 MYH16Q9H6N6 1097 aa29.46■■■□□ 2.31
TOP2B-204ENST00000435706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.44■■■□□ 2.32e-7■■■■□ 20.3
TOP2B-204ENST00000435706 TSHZ2Q9NRE2 1034 aa29.4■■■□□ 2.3
TOP2B-204ENST00000435706 NCLP19338 710 aaKnown RBP29.39■■■□□ 2.3
TOP2B-204ENST00000435706 SIN3AQ96ST3 1273 aa29.37■■■□□ 2.29
TOP2B-204ENST00000435706 TSPY4P0CV99 314 aa29.35■■■□□ 2.29
TOP2B-204ENST00000435706 TSPY10P0CW01 314 aa29.35■■■□□ 2.29
TOP2B-204ENST00000435706 RSF1Q96T23 1441 aaPredicted RBP29.34■■■□□ 2.29
TOP2B-204ENST00000435706 PTMAP06454 111 aaKnown RBP29.34■■■□□ 2.29
TOP2B-204ENST00000435706 CCER2I3L3R5 266 aa29.33■■■□□ 2.29
TOP2B-204ENST00000435706 RGS3P49796 1198 aa29.31■■■□□ 2.28
TOP2B-204ENST00000435706 DNTTIP2Q5QJE6 756 aaKnown RBP29.27■■■□□ 2.28
TOP2B-204ENST00000435706 CEP164Q9UPV0 1460 aa29.21■■■□□ 2.27
TOP2B-204ENST00000435706 STAG3Q9UJ98 1225 aa29.2■■■□□ 2.27
TOP2B-204ENST00000435706 L1TD1Q5T7N2 865 aaKnown RBP29.16■■■□□ 2.26
TOP2B-204ENST00000435706 CARD11Q9BXL7 1154 aa29.16■■■□□ 2.26
TOP2B-204ENST00000435706 KNSTRNQ9Y448 316 aa29.14■■■□□ 2.26
TOP2B-204ENST00000435706 FTSJ3Q8IY81 847 aaKnown RBP29.13■■■□□ 2.25
TOP2B-204ENST00000435706 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
TOP2B-204ENST00000435706 TIMELESSQ9UNS1 1208 aa29.11■■■□□ 2.25
TOP2B-204ENST00000435706 CCNB3Q8WWL7 1395 aa29.07■■■□□ 2.24
TOP2B-204ENST00000435706 RGL3Q3MIN7 710 aa29.06■■■□□ 2.24
TOP2B-204ENST00000435706 CASC1Q6TDU7 716 aa29.06■■■□□ 2.24
TOP2B-204ENST00000435706 CFAP53Q96M91 514 aa29.05■■■□□ 2.24
TOP2B-204ENST00000435706 CDCA8Q53HL2 280 aa29.04■■■□□ 2.24
TOP2B-204ENST00000435706 HSP90AB1P08238 724 aaKnown RBP29.03■■■□□ 2.24
TOP2B-204ENST00000435706 FRAT1Q92837 279 aaPredicted RBP29.02■■■□□ 2.24
TOP2B-204ENST00000435706 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.01■■■□□ 2.23
TOP2B-204ENST00000435706 ESF1Q9H501 851 aaKnown RBP28.99■■■□□ 2.23
TOP2B-204ENST00000435706 NEUROD2Q15784 382 aa28.98■■■□□ 2.23
TOP2B-204ENST00000435706 TPRNQ4KMQ1 711 aa28.98■■■□□ 2.23
TOP2B-204ENST00000435706 HSCBQ8IWL3 235 aa28.94■■■□□ 2.22
TOP2B-204ENST00000435706 MSNP26038 577 aaKnown RBP28.94■■■□□ 2.22
TOP2B-204ENST00000435706 IPO9Q96P70 1041 aaKnown RBP28.93■■■□□ 2.22
TOP2B-204ENST00000435706 CC2D1BQ5T0F9 858 aaKnown RBP28.93■■■□□ 2.22
TOP2B-204ENST00000435706 PLCB2Q00722 1185 aa28.92■■■□□ 2.22
TOP2B-204ENST00000435706 ZRSR1Q15695 479 aaKnown RBP28.91■■■□□ 2.22
TOP2B-204ENST00000435706 TCERG1O14776 1098 aaKnown RBP28.9■■■□□ 2.22
TOP2B-204ENST00000435706 HSPA5P11021 654 aaKnown RBP28.89■■■□□ 2.21
TOP2B-204ENST00000435706 RB1CC1Q8TDY2 1594 aa28.89■■■□□ 2.21
TOP2B-204ENST00000435706 CDK11BP21127 795 aaKnown RBP28.88■■■□□ 2.21
TOP2B-204ENST00000435706 KIF27Q86VH2 1401 aa28.87■■■□□ 2.21
TOP2B-204ENST00000435706 SPRYD3Q8NCJ5 442 aa28.85■■■□□ 2.21
TOP2B-204ENST00000435706 SETD5Q9C0A6 1442 aa28.85■■■□□ 2.21
TOP2B-204ENST00000435706 MS4A1P11836 297 aa28.85■■■□□ 2.21
TOP2B-204ENST00000435706 ARID4BQ4LE39 1312 aaPredicted RBP28.84■■■□□ 2.21
TOP2B-204ENST00000435706 PNNQ9H307 717 aaKnown RBP28.83■■■□□ 2.21
TOP2B-204ENST00000435706 MAPK8IP3Q9UPT6 1336 aa28.81■■■□□ 2.2
TOP2B-204ENST00000435706 CFDP1Q9UEE9 299 aaPredicted RBP28.8■■■□□ 2.2
TOP2B-204ENST00000435706 CHMP4BQ9H444 224 aaKnown RBP28.79■■■□□ 2.2
TOP2B-204ENST00000435706 VPS8Q8N3P4 1428 aa28.78■■■□□ 2.2
TOP2B-204ENST00000435706 CHAF1AQ13111 956 aaPredicted RBP28.78■■■□□ 2.2
TOP2B-204ENST00000435706 RCAN3Q9UKA8 241 aa28.77■■■□□ 2.2
TOP2B-204ENST00000435706 SOGA1O94964 1423 aa28.76■■■□□ 2.19
TOP2B-204ENST00000435706 PLEKHD1A6NEE1 506 aa28.74■■■□□ 2.19
TOP2B-204ENST00000435706 NUDCQ9Y266 331 aa28.74■■■□□ 2.19
TOP2B-204ENST00000435706 SLKQ9H2G2 1235 aaPredicted RBP28.72■■■□□ 2.19
TOP2B-204ENST00000435706 GZF1Q9H116 711 aaPredicted RBP28.71■■■□□ 2.19
TOP2B-204ENST00000435706 NPM1P06748 294 aaKnown RBP eCLIP28.69■■■□□ 2.18
TOP2B-204ENST00000435706 GOLGA6L6A8MZA4 724 aa28.69■■■□□ 2.18
TOP2B-204ENST00000435706 TMF1P82094 1093 aa28.68■■■□□ 2.18
TOP2B-204ENST00000435706 FHAD1B1AJZ9 1412 aa28.67■■■□□ 2.18
TOP2B-204ENST00000435706 SENP3Q9H4L4 574 aaPredicted RBP28.67■■■□□ 2.18
TOP2B-204ENST00000435706 CHMP7Q8WUX9 453 aaPredicted RBP28.66■■■□□ 2.18
TOP2B-204ENST00000435706 GBP4Q96PP9 640 aa28.66■■■□□ 2.18
TOP2B-204ENST00000435706 RAB3GAP2Q9H2M9 1393 aa28.66■■■□□ 2.18
TOP2B-204ENST00000435706 GOLGA6L3A6NEY3 463 aa28.65■■■□□ 2.18
TOP2B-204ENST00000435706 PTMSP20962 102 aa28.64■■■□□ 2.17
TOP2B-204ENST00000435706 USP35Q9P2H5 1018 aa28.63■■■□□ 2.17
TOP2B-204ENST00000435706 KANK4Q5T7N3 995 aaPredicted RBP28.63■■■□□ 2.17
TOP2B-204ENST00000435706 DCAF11Q8TEB1 546 aa28.63■■■□□ 2.17
TOP2B-204ENST00000435706 KTN1Q86UP2 1357 aaKnown RBP28.61■■■□□ 2.17
TOP2B-204ENST00000435706 NRDCO43847 1150 aa28.6■■■□□ 2.17
TOP2B-204ENST00000435706 PPP1R15AO75807 674 aaPredicted RBP28.6■■■□□ 2.17
TOP2B-204ENST00000435706 FANCIQ9NVI1 1328 aa28.59■■■□□ 2.17
TOP2B-204ENST00000435706 KCNH8Q96L42 1107 aa28.57■■■□□ 2.16
TOP2B-204ENST00000435706 PLPPR3Q6T4P5 718 aa28.57■■■□□ 2.16
TOP2B-204ENST00000435706 U2SURPO15042 1029 aaKnown RBP28.57■■■□□ 2.16
TOP2B-204ENST00000435706 GOLGA6L4A6NEF3 574 aa28.54■■■□□ 2.16
TOP2B-204ENST00000435706 RALBP1Q15311 655 aa28.54■■■□□ 2.16
TOP2B-204ENST00000435706 ARID3AQ99856 593 aa28.54■■■□□ 2.16
TOP2B-204ENST00000435706 RSPH6AQ9H0K4 717 aa28.54■■■□□ 2.16
TOP2B-204ENST00000435706 CFAP44Q96MT7 982 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms