RNA–Protein interactions for RNA: ENST00000435345.6

SCP2-207, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 894 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-207ENST00000435345 PLCD3Q8N3E9 789 aa14.86□□□□□ -0.03
SCP2-207ENST00000435345 VASPP50552 380 aaPredicted RBP14.84□□□□□ -0.03
SCP2-207ENST00000435345 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
SCP2-207ENST00000435345 HAX1O00165 279 aa14.83□□□□□ -0.04
SCP2-207ENST00000435345 NESP48681 1621 aa14.82□□□□□ -0.04
SCP2-207ENST00000435345 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
SCP2-207ENST00000435345 NCAPD3P42695 1498 aa14.8□□□□□ -0.04
SCP2-207ENST00000435345 C19orf67A6NJJ6 358 aa14.79□□□□□ -0.04
SCP2-207ENST00000435345 NPM1P06748 294 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCP2-207ENST00000435345 EVX2Q03828 476 aa14.73□□□□□ -0.05
SCP2-207ENST00000435345 SMARCA2P51531 1590 aa14.72□□□□□ -0.05
SCP2-207ENST00000435345 ZBTB47Q9UFB7 747 aaPredicted RBP14.71□□□□□ -0.05
SCP2-207ENST00000435345 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
SCP2-207ENST00000435345 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
SCP2-207ENST00000435345 CD44P16070 742 aaKnown RBP14.69□□□□□ -0.06
SCP2-207ENST00000435345 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
SCP2-207ENST00000435345 KIF21AQ7Z4S6 1674 aa14.61□□□□□ -0.07
SCP2-207ENST00000435345 LAMC3Q9Y6N6 1575 aa14.6□□□□□ -0.07
SCP2-207ENST00000435345 KLHL34Q8N239 644 aa14.6□□□□□ -0.07
SCP2-207ENST00000435345 SP7Q8TDD2 431 aaPredicted RBP14.6□□□□□ -0.07
SCP2-207ENST00000435345 NUBP1P53384 320 aa14.59□□□□□ -0.07
SCP2-207ENST00000435345 RASEFQ8IZ41 740 aa14.58□□□□□ -0.08
SCP2-207ENST00000435345 BAZ1AQ9NRL2 1556 aaPredicted RBP14.57□□□□□ -0.08
SCP2-207ENST00000435345 ZRANB1Q9UGI0 708 aa14.57□□□□□ -0.08
SCP2-207ENST00000435345 SMARCA4P51532 1647 aa14.55□□□□□ -0.08
SCP2-207ENST00000435345 PAK3O75914 559 aaPredicted RBP14.55□□□□□ -0.08
SCP2-207ENST00000435345 BAZ1BQ9UIG0 1483 aaKnown RBP14.54□□□□□ -0.08
SCP2-207ENST00000435345 TSPYL2Q9H2G4 693 aaPredicted RBP14.52□□□□□ -0.09
SCP2-207ENST00000435345 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
SCP2-207ENST00000435345 ZNF579Q8NAF0 562 aaKnown RBP14.51□□□□□ -0.09
SCP2-207ENST00000435345 SPOCK2Q92563 424 aa14.48□□□□□ -0.09
SCP2-207ENST00000435345 WDR62O43379 1518 aa14.47□□□□□ -0.09
SCP2-207ENST00000435345 MRC2Q9UBG0 1479 aa14.47□□□□□ -0.09
SCP2-207ENST00000435345 CCDC61Q9Y6R9 512 aa14.45□□□□□ -0.1
SCP2-207ENST00000435345 FAM212AQ96EL1 285 aa14.44□□□□□ -0.1
SCP2-207ENST00000435345 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
SCP2-207ENST00000435345 GABBR2O75899 941 aa14.42□□□□□ -0.1
SCP2-207ENST00000435345 PEG3Q9GZU2 1588 aa14.4□□□□□ -0.1
SCP2-207ENST00000435345 DCAF8Q5TAQ9 597 aa14.39□□□□□ -0.11
SCP2-207ENST00000435345 RIMBP3CA6NJZ7 1639 aa14.39□□□□□ -0.11
SCP2-207ENST00000435345 RIMBP3BA6NNM3 1639 aa14.39□□□□□ -0.11
SCP2-207ENST00000435345 RIMBP3Q9UFD9 1639 aa14.39□□□□□ -0.11
SCP2-207ENST00000435345 CLCN6P51797 869 aa14.38□□□□□ -0.11
SCP2-207ENST00000435345 GSE1Q14687 1217 aa14.34□□□□□ -0.11
SCP2-207ENST00000435345 KIF12Q96FN5 646 aa14.32□□□□□ -0.12
SCP2-207ENST00000435345 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
SCP2-207ENST00000435345 GALR2O43603 387 aaPredicted RBP14.29□□□□□ -0.12
SCP2-207ENST00000435345 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
SCP2-207ENST00000435345 ARHGEF11O15085 1522 aa14.29□□□□□ -0.12
SCP2-207ENST00000435345 CIZ1Q9ULV3 898 aaPredicted RBP14.28□□□□□ -0.12
SCP2-207ENST00000435345 MAP3K13O43283 966 aa14.26□□□□□ -0.13
SCP2-207ENST00000435345 MS4A3Q96HJ5 214 aa14.26□□□□□ -0.13
SCP2-207ENST00000435345 PYGBP11216 843 aa14.24□□□□□ -0.13
SCP2-207ENST00000435345 MROH2BQ7Z745 1585 aa14.22□□□□□ -0.13
SCP2-207ENST00000435345 FANCD2Q9BXW9 1451 aa14.21□□□□□ -0.13
SCP2-207ENST00000435345 SGIP1Q9BQI5 828 aa14.2□□□□□ -0.14
SCP2-207ENST00000435345 CHRM1P11229 460 aaPredicted RBP14.19□□□□□ -0.14
SCP2-207ENST00000435345 PCDHB13Q9Y5F0 798 aa14.19□□□□□ -0.14
SCP2-207ENST00000435345 POTEIP0CG38 1075 aa14.14□□□□□ -0.15
SCP2-207ENST00000435345 IFNL1Q8IU54 200 aa14.14□□□□□ -0.15
SCP2-207ENST00000435345 URB2Q14146 1524 aaKnown RBP14.14□□□□□ -0.15
SCP2-207ENST00000435345 CYB5RLQ6IPT4 315 aa14.12□□□□□ -0.15
SCP2-207ENST00000435345 DCBLD2Q96PD2 775 aa14.12□□□□□ -0.15
SCP2-207ENST00000435345 TRPC6Q9Y210 931 aa14.12□□□□□ -0.15
SCP2-207ENST00000435345 ARAP1Q96P48 1450 aa14.12□□□□□ -0.15
SCP2-207ENST00000435345 PCDHB8Q9UN66 801 aa14.08□□□□□ -0.16
SCP2-207ENST00000435345 PKD2Q13563 968 aa14.07□□□□□ -0.16
SCP2-207ENST00000435345 ZNF608Q9ULD9 1512 aaPredicted RBP14.06□□□□□ -0.16
SCP2-207ENST00000435345 ZNF467Q7Z7K2 595 aaPredicted RBP14.05□□□□□ -0.16
SCP2-207ENST00000435345 CFTRP13569 1480 aa14.05□□□□□ -0.16
SCP2-207ENST00000435345 TIE1P35590 1138 aa14.04□□□□□ -0.16
SCP2-207ENST00000435345 ASTLQ6HA08 431 aaPredicted RBP14.04□□□□□ -0.16
SCP2-207ENST00000435345 BMP2KQ9NSY1 1161 aaPredicted RBP14.03□□□□□ -0.16
SCP2-207ENST00000435345 WIZO95785 1651 aa14.02□□□□□ -0.16
SCP2-207ENST00000435345 ATMINO43313 823 aaPredicted RBP14.02□□□□□ -0.17
SCP2-207ENST00000435345 IFT140Q96RY7 1462 aa14□□□□□ -0.17
SCP2-207ENST00000435345 ECM2O94769 699 aaPredicted RBP13.99□□□□□ -0.17
SCP2-207ENST00000435345 RNF25Q96BH1 459 aaPredicted RBP13.99□□□□□ -0.17
SCP2-207ENST00000435345 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
SCP2-207ENST00000435345 TTLL13PA6NNM8 815 aa13.98□□□□□ -0.17
SCP2-207ENST00000435345 CHD1O14646 1710 aa13.98□□□□□ -0.17
SCP2-207ENST00000435345 ATN1P54259 1190 aaPredicted RBP13.97□□□□□ -0.17
SCP2-207ENST00000435345 PELP1Q8IZL8 1130 aaKnown RBP13.97□□□□□ -0.17
SCP2-207ENST00000435345 RSF1Q96T23 1441 aaPredicted RBP13.97□□□□□ -0.17
SCP2-207ENST00000435345 TMEM106CQ9BVX2 250 aa13.95□□□□□ -0.18
SCP2-207ENST00000435345 RIOK3O14730 519 aaKnown RBP13.92□□□□□ -0.18
SCP2-207ENST00000435345 PSEN1P49768 467 aa13.91□□□□□ -0.18
SCP2-207ENST00000435345 PDAP1Q13442 181 aaKnown RBP13.91□□□□□ -0.18
SCP2-207ENST00000435345 RGL2O15211 777 aa13.89□□□□□ -0.19
SCP2-207ENST00000435345 PRDM2Q13029 1718 aa13.88□□□□□ -0.19
SCP2-207ENST00000435345 TRIM35Q9UPQ4 493 aa13.88□□□□□ -0.19
SCP2-207ENST00000435345 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
SCP2-207ENST00000435345 SLC39A7Q92504 469 aa13.85□□□□□ -0.19
SCP2-207ENST00000435345 VGFO15240 615 aaPredicted RBP13.84□□□□□ -0.19
SCP2-207ENST00000435345 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCP2-207ENST00000435345 TOP2AP11388 1531 aaKnown RBP13.82□□□□□ -0.2
SCP2-207ENST00000435345 CLASP1Q7Z460 1538 aa13.82□□□□□ -0.2
SCP2-207ENST00000435345 C7P10643 843 aa13.82□□□□□ -0.2
SCP2-207ENST00000435345 METRNQ9UJH8 293 aa13.82□□□□□ -0.2
SCP2-207ENST00000435345 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms