RNA–Protein interactions for RNA: ENST00000433480.2

LINC00441-201, humanhuman

TSL 1 (best) BASIC

Gene LINC00441, Length 1,143 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00441-201ENST00000433480 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
LINC00441-201ENST00000433480 KIF13AQ9H1H9 1805 aa23.99■■□□□ 1.43
LINC00441-201ENST00000433480 KIF27Q86VH2 1401 aa23.97■■□□□ 1.43
LINC00441-201ENST00000433480 NPM1P06748 294 aaKnown RBP eCLIP23.89■■□□□ 1.41
LINC00441-201ENST00000433480 ABCC10Q5T3U5 1492 aa23.87■■□□□ 1.41
LINC00441-201ENST00000433480 MAPKBP1O60336 1514 aa23.86■■□□□ 1.41
LINC00441-201ENST00000433480 KIAA0586Q9BVV6 1533 aa23.86■■□□□ 1.41
LINC00441-201ENST00000433480 IGF1RP08069 1367 aa23.86■■□□□ 1.41
LINC00441-201ENST00000433480 EEA1Q15075 1411 aa23.84■■□□□ 1.41
LINC00441-201ENST00000433480 CUL7Q14999 1698 aa23.84■■□□□ 1.41
LINC00441-201ENST00000433480 FAM69CQ0P6D2 419 aa23.84■■□□□ 1.41
LINC00441-201ENST00000433480 ADCY10Q96PN6 1610 aa23.83■■□□□ 1.41
LINC00441-201ENST00000433480 DIP2BQ9P265 1576 aa23.8■■□□□ 1.4
LINC00441-201ENST00000433480 CSRNP3Q8WYN3 585 aa23.77■■□□□ 1.4
LINC00441-201ENST00000433480 CARMIL1Q5VZK9 1371 aa23.69■■□□□ 1.38
LINC00441-201ENST00000433480 PTPRGP23470 1445 aa23.68■■□□□ 1.38
LINC00441-201ENST00000433480 FAM9AQ8IZU1 332 aaPredicted RBP23.68■■□□□ 1.38
LINC00441-201ENST00000433480 KDM6BO15054 1643 aa23.66■■□□□ 1.38
LINC00441-201ENST00000433480 CARMIL2Q6F5E8 1435 aa23.64■■□□□ 1.37
LINC00441-201ENST00000433480 TNIKQ9UKE5 1360 aa23.63■■□□□ 1.37
LINC00441-201ENST00000433480 TSPOAP1O95153 1857 aa23.62■■□□□ 1.37
LINC00441-201ENST00000433480 IQGAP2Q13576 1575 aa23.6■■□□□ 1.37
LINC00441-201ENST00000433480 ABCC2Q92887 1545 aa23.59■■□□□ 1.37
LINC00441-201ENST00000433480 TTBK1Q5TCY1 1321 aaPredicted RBP23.59■■□□□ 1.37
LINC00441-201ENST00000433480 PRXQ9BXM0 1461 aa23.56■■□□□ 1.36
LINC00441-201ENST00000433480 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
LINC00441-201ENST00000433480 UHRF1BP1LA0JNW5 1464 aa23.53■■□□□ 1.36
LINC00441-201ENST00000433480 PLB1Q6P1J6 1458 aa23.53■■□□□ 1.36
LINC00441-201ENST00000433480 ASXL2Q76L83 1435 aa23.52■■□□□ 1.36
LINC00441-201ENST00000433480 GLI2P10070 1586 aa23.51■■□□□ 1.35
LINC00441-201ENST00000433480 DISP1Q96F81 1524 aa23.5■■□□□ 1.35
LINC00441-201ENST00000433480 KDM4FA0A1W2PPD8 638 aa23.5■■□□□ 1.35
LINC00441-201ENST00000433480 UACAQ9BZF9 1416 aa23.5■■□□□ 1.35
LINC00441-201ENST00000433480 PPRC1Q5VV67 1664 aaKnown RBP23.45■■□□□ 1.34
LINC00441-201ENST00000433480 UGGT2Q9NYU1 1516 aa23.44■■□□□ 1.34
LINC00441-201ENST00000433480 KDM5BQ9UGL1 1544 aa23.42■■□□□ 1.34
LINC00441-201ENST00000433480 KIF21BO75037 1637 aa23.4■■□□□ 1.34
LINC00441-201ENST00000433480 EPRSP07814 1512 aaKnown RBP23.38■■□□□ 1.33
LINC00441-201ENST00000433480 KIAA0556O60303 1618 aa23.38■■□□□ 1.33
LINC00441-201ENST00000433480 UBTFP17480 764 aaKnown RBP23.38■■□□□ 1.33
LINC00441-201ENST00000433480 GOLGA3Q08378 1498 aa23.37■■□□□ 1.33
LINC00441-201ENST00000433480 ZCCHC11Q5TAX3 1644 aaKnown RBP23.36■■□□□ 1.33
LINC00441-201ENST00000433480 MAP3K4Q9Y6R4 1608 aa23.35■■□□□ 1.33
LINC00441-201ENST00000433480 TEX14Q8IWB6 1497 aa23.31■■□□□ 1.32
LINC00441-201ENST00000433480 COL17A1Q9UMD9 1497 aaPredicted RBP23.3■■□□□ 1.32
LINC00441-201ENST00000433480 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
LINC00441-201ENST00000433480 EHMT2Q96KQ7 1210 aa23.28■■□□□ 1.32
LINC00441-201ENST00000433480 ADGRL1O94910 1474 aa23.27■■□□□ 1.32
LINC00441-201ENST00000433480 WDR7Q9Y4E6 1490 aa23.26■■□□□ 1.31
LINC00441-201ENST00000433480 LOC105371045A0A1W2PR82 267 aa23.22■■□□□ 1.31
LINC00441-201ENST00000433480 ABCA8O94911 1581 aa23.19■■□□□ 1.3
LINC00441-201ENST00000433480 CFAP43Q8NDM7 1665 aa23.16■■□□□ 1.3
LINC00441-201ENST00000433480 MAGI3Q5TCQ9 1506 aa23.15■■□□□ 1.3
LINC00441-201ENST00000433480 CD109Q6YHK3 1445 aa23.15■■□□□ 1.3
LINC00441-201ENST00000433480 KCNH8Q96L42 1107 aa23.12■■□□□ 1.29
LINC00441-201ENST00000433480 RANGAP1P46060 587 aaPredicted RBP23.06■■□□□ 1.28
LINC00441-201ENST00000433480 HECW2Q9P2P5 1572 aa23.02■■□□□ 1.28
LINC00441-201ENST00000433480 ILDR1Q86SU0 546 aaPredicted RBP23.01■■□□□ 1.27
LINC00441-201ENST00000433480 ATP10BO94823 1461 aa22.99■■□□□ 1.27
LINC00441-201ENST00000433480 EFCAB5A4FU69 1503 aa22.99■■□□□ 1.27
LINC00441-201ENST00000433480 CLIP1P30622 1438 aa22.99■■□□□ 1.27
LINC00441-201ENST00000433480 P3H3Q8IVL6 736 aa22.98■■□□□ 1.27
LINC00441-201ENST00000433480 ARAP3Q8WWN8 1544 aa22.98■■□□□ 1.27
LINC00441-201ENST00000433480 ARID3CA6NKF2 412 aa22.96■■□□□ 1.27
LINC00441-201ENST00000433480 CEP162Q5TB80 1403 aa22.96■■□□□ 1.27
LINC00441-201ENST00000433480 SAMD9Q5K651 1589 aa22.94■■□□□ 1.26
LINC00441-201ENST00000433480 ABCA9Q8IUA7 1624 aa22.93■■□□□ 1.26
LINC00441-201ENST00000433480 PHLDB1Q86UU1 1377 aa22.91■■□□□ 1.26
LINC00441-201ENST00000433480 ARHGAP35Q9NRY4 1499 aa22.91■■□□□ 1.26
LINC00441-201ENST00000433480 RAPGEF6Q8TEU7 1601 aa22.9■■□□□ 1.26
LINC00441-201ENST00000433480 FHOD3Q2V2M9 1422 aa22.85■■□□□ 1.25
LINC00441-201ENST00000433480 FMN1Q68DA7 1419 aa22.85■■□□□ 1.25
LINC00441-201ENST00000433480 NEO1Q92859 1461 aa22.85■■□□□ 1.25
LINC00441-201ENST00000433480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.82■■□□□ 1.24
LINC00441-201ENST00000433480 HNRNPUL2Q1KMD3 747 aaKnown RBP22.82■■□□□ 1.24
LINC00441-201ENST00000433480 RAPGEF3O95398 923 aa22.81■■□□□ 1.24
LINC00441-201ENST00000433480 NUP153P49790 1475 aaKnown RBP22.8■■□□□ 1.24
LINC00441-201ENST00000433480 ADAMTSL3P82987 1691 aa22.78■■□□□ 1.24
LINC00441-201ENST00000433480 FRMPD1Q5SYB0 1578 aa22.76■■□□□ 1.23
LINC00441-201ENST00000433480 PTPRMP28827 1452 aa22.75■■□□□ 1.23
LINC00441-201ENST00000433480 BCORL1Q5H9F3 1711 aa22.71■■□□□ 1.23
LINC00441-201ENST00000433480 PLEKHD1A6NEE1 506 aa22.71■■□□□ 1.23
LINC00441-201ENST00000433480 CASKIN1Q8WXD9 1431 aa22.68■■□□□ 1.22
LINC00441-201ENST00000433480 ARID4BQ4LE39 1312 aaPredicted RBP22.68■■□□□ 1.22
LINC00441-201ENST00000433480 ATP1B4Q9UN42 357 aaPredicted RBP22.68■■□□□ 1.22
LINC00441-201ENST00000433480 DENND4BO75064 1496 aaPredicted RBP22.67■■□□□ 1.22
LINC00441-201ENST00000433480 VPS8Q8N3P4 1428 aa22.67■■□□□ 1.22
LINC00441-201ENST00000433480 MADDQ8WXG6 1647 aa22.66■■□□□ 1.22
LINC00441-201ENST00000433480 CFAP74Q9C0B2 1584 aa22.66■■□□□ 1.22
LINC00441-201ENST00000433480 ARHGEF40Q8TER5 1519 aa22.66■■□□□ 1.22
LINC00441-201ENST00000433480 AKNAQ7Z591 1439 aa22.65■■□□□ 1.22
LINC00441-201ENST00000433480 RICTORQ6R327 1708 aa22.65■■□□□ 1.22
LINC00441-201ENST00000433480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.64■■□□□ 1.21
LINC00441-201ENST00000433480 FANCAO15360 1455 aa22.64■■□□□ 1.21
LINC00441-201ENST00000433480 FYCO1Q9BQS8 1478 aa22.62■■□□□ 1.21
LINC00441-201ENST00000433480 CDK11AQ9UQ88 783 aaPredicted RBP22.61■■□□□ 1.21
LINC00441-201ENST00000433480 TTC37Q6PGP7 1564 aa22.6■■□□□ 1.21
LINC00441-201ENST00000433480 PCF11O94913 1555 aaKnown RBP22.59■■□□□ 1.21
LINC00441-201ENST00000433480 ZMYM4Q5VZL5 1548 aa22.58■■□□□ 1.21
LINC00441-201ENST00000433480 APLP2Q06481 763 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms