RNA–Protein interactions for RNA: ENST00000433094.1

LINC00494-203, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best)

Gene LINC00494, Length 3,071 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-203ENST00000433094 PPP4R2Q9NY27 417 aa13.96□□□□□ -0.17
LINC00494-203ENST00000433094 HNRNPUQ00839 825 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC00494-203ENST00000433094 HIRIP3Q9BW71 556 aaPredicted RBP13.93□□□□□ -0.18
LINC00494-203ENST00000433094 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
LINC00494-203ENST00000433094 B4GALNT3Q6L9W6 998 aa13.9□□□□□ -0.18
LINC00494-203ENST00000433094 BAZ1AQ9NRL2 1556 aaPredicted RBP13.88□□□□□ -0.19
LINC00494-203ENST00000433094 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
LINC00494-203ENST00000433094 ANP32AP39687 249 aaKnown RBP13.86□□□□□ -0.19
LINC00494-203ENST00000433094 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
LINC00494-203ENST00000433094 IPO9Q96P70 1041 aaKnown RBP13.85□□□□□ -0.19
LINC00494-203ENST00000433094 SIN3AQ96ST3 1273 aa13.84□□□□□ -0.19
LINC00494-203ENST00000433094 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
LINC00494-203ENST00000433094 KIF21BO75037 1637 aa13.81□□□□□ -0.2
LINC00494-203ENST00000433094 CUX2O14529 1486 aa13.8□□□□□ -0.2
LINC00494-203ENST00000433094 RAB3GAP2Q9H2M9 1393 aa13.8□□□□□ -0.2
LINC00494-203ENST00000433094 RRBP1Q9P2E9 1410 aaKnown RBP13.79□□□□□ -0.2
LINC00494-203ENST00000433094 CCNB3Q8WWL7 1395 aa13.78□□□□□ -0.2
LINC00494-203ENST00000433094 MAPKBP1O60336 1514 aa13.77□□□□□ -0.2
LINC00494-203ENST00000433094 AEBP2Q6ZN18 517 aaPredicted RBP13.76□□□□□ -0.21
LINC00494-203ENST00000433094 WASHC2AQ641Q2 1341 aa13.76□□□□□ -0.21
LINC00494-203ENST00000433094 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
LINC00494-203ENST00000433094 BAZ1BQ9UIG0 1483 aaKnown RBP13.75□□□□□ -0.21
LINC00494-203ENST00000433094 RAPGEF2Q9Y4G8 1499 aa13.75□□□□□ -0.21
LINC00494-203ENST00000433094 TIMELESSQ9UNS1 1208 aa13.74□□□□□ -0.21
LINC00494-203ENST00000433094 NEFMP07197 916 aa13.73□□□□□ -0.21
LINC00494-203ENST00000433094 C11orf95C9JLR9 678 aaPredicted RBP13.73□□□□□ -0.21
LINC00494-203ENST00000433094 TOP2AP11388 1531 aaKnown RBP13.71□□□□□ -0.21
LINC00494-203ENST00000433094 USP35Q9P2H5 1018 aa13.7□□□□□ -0.22
LINC00494-203ENST00000433094 SMARCA2P51531 1590 aa13.7□□□□□ -0.22
LINC00494-203ENST00000433094 LAS1LQ9Y4W2 734 aaKnown RBP13.7□□□□□ -0.22
LINC00494-203ENST00000433094 BRPF3Q9ULD4 1205 aa13.69□□□□□ -0.22
LINC00494-203ENST00000433094 PKNOX2Q96KN3 472 aa13.68□□□□□ -0.22
LINC00494-203ENST00000433094 WASHC2CQ9Y4E1 1318 aa13.68□□□□□ -0.22
LINC00494-203ENST00000433094 SETD5Q9C0A6 1442 aa13.67□□□□□ -0.22
LINC00494-203ENST00000433094 UNC13AQ9UPW8 1703 aa13.66□□□□□ -0.22
LINC00494-203ENST00000433094 NPM2Q86SE8 214 aaKnown RBP13.66□□□□□ -0.22
LINC00494-203ENST00000433094 FAM9BQ8IZU0 186 aa13.65□□□□□ -0.23
LINC00494-203ENST00000433094 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
LINC00494-203ENST00000433094 PPM1GO15355 546 aaPredicted RBP13.62□□□□□ -0.23
LINC00494-203ENST00000433094 CCDC184Q52MB2 194 aa13.62□□□□□ -0.23
LINC00494-203ENST00000433094 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
LINC00494-203ENST00000433094 ZBED9Q6R2W3 1325 aa13.6□□□□□ -0.23
LINC00494-203ENST00000433094 BICRAQ9NZM4 1560 aa13.6□□□□□ -0.23
LINC00494-203ENST00000433094 GSE1Q14687 1217 aa13.59□□□□□ -0.23
LINC00494-203ENST00000433094 RSPH6AQ9H0K4 717 aa13.59□□□□□ -0.23
LINC00494-203ENST00000433094 TONSLQ96HA7 1378 aa13.59□□□□□ -0.23
LINC00494-203ENST00000433094 FAM50AQ14320 339 aaKnown RBP13.57□□□□□ -0.24
LINC00494-203ENST00000433094 MRS2Q9HD23 443 aa13.57□□□□□ -0.24
LINC00494-203ENST00000433094 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
LINC00494-203ENST00000433094 GLIPR1L2Q4G1C9 344 aa13.52□□□□□ -0.24
LINC00494-203ENST00000433094 AKNAQ7Z591 1439 aa13.52□□□□□ -0.25
LINC00494-203ENST00000433094 FRAT1Q92837 279 aaPredicted RBP13.5□□□□□ -0.25
LINC00494-203ENST00000433094 PRKRIP1Q9H875 184 aaPredicted RBP13.5□□□□□ -0.25
LINC00494-203ENST00000433094 PDE4AP27815 886 aa13.49□□□□□ -0.25
LINC00494-203ENST00000433094 TCERG1O14776 1098 aaKnown RBP13.48□□□□□ -0.25
LINC00494-203ENST00000433094 HSPA5P11021 654 aaKnown RBP13.48□□□□□ -0.25
LINC00494-203ENST00000433094 NFKBIBQ15653 356 aa13.47□□□□□ -0.25
LINC00494-203ENST00000433094 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
LINC00494-203ENST00000433094 FAM43AQ8N2R8 423 aa13.47□□□□□ -0.25
LINC00494-203ENST00000433094 SMARCA4P51532 1647 aa13.46□□□□□ -0.25
LINC00494-203ENST00000433094 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
LINC00494-203ENST00000433094 RNF123Q5XPI4 1314 aa13.46□□□□□ -0.26
LINC00494-203ENST00000433094 SMG6Q86US8 1419 aaKnown RBP13.46□□□□□ -0.26
LINC00494-203ENST00000433094 VSIG10Q8N0Z9 540 aa13.45□□□□□ -0.26
LINC00494-203ENST00000433094 FHAD1B1AJZ9 1412 aa13.45□□□□□ -0.26
LINC00494-203ENST00000433094 BACH2Q9BYV9 841 aa13.45□□□□□ -0.26
LINC00494-203ENST00000433094 ZMYND15Q9H091 742 aa13.45□□□□□ -0.26
LINC00494-203ENST00000433094 PRXQ9BXM0 1461 aa13.43□□□□□ -0.26
LINC00494-203ENST00000433094 CNTLNQ9NXG0 1405 aa13.43□□□□□ -0.26
LINC00494-203ENST00000433094 PHLDB1Q86UU1 1377 aa13.43□□□□□ -0.26
LINC00494-203ENST00000433094 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
LINC00494-203ENST00000433094 EIF4G2P78344 907 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC00494-203ENST00000433094 ERICH3Q5RHP9 1530 aa13.42□□□□□ -0.26
LINC00494-203ENST00000433094 PODXL2Q9NZ53 605 aa13.41□□□□□ -0.26
LINC00494-203ENST00000433094 MS4A1P11836 297 aa13.39□□□□□ -0.27
LINC00494-203ENST00000433094 ARHGAP35Q9NRY4 1499 aa13.39□□□□□ -0.27
LINC00494-203ENST00000433094 SENP3-EIF4A1A0A087X0R7 540 aa13.38□□□□□ -0.27
LINC00494-203ENST00000433094 PEG3Q9GZU2 1588 aa13.38□□□□□ -0.27
LINC00494-203ENST00000433094 SLC4A3P48751 1232 aa13.38□□□□□ -0.27
LINC00494-203ENST00000433094 DCAF11Q8TEB1 546 aa13.38□□□□□ -0.27
LINC00494-203ENST00000433094 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
LINC00494-203ENST00000433094 EXOC6Q8TAG9 804 aa13.36□□□□□ -0.27
LINC00494-203ENST00000433094 NCOA2Q15596 1464 aa13.35□□□□□ -0.27
LINC00494-203ENST00000433094 LRRC9Q6ZRR7 1453 aa13.34□□□□□ -0.27
LINC00494-203ENST00000433094 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
LINC00494-203ENST00000433094 CCDC7Q96M83 1385 aa13.33□□□□□ -0.28
LINC00494-203ENST00000433094 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.28
LINC00494-203ENST00000433094 TIAM1Q13009 1591 aa13.33□□□□□ -0.28
LINC00494-203ENST00000433094 FRAT2O75474 233 aaPredicted RBP13.32□□□□□ -0.28
LINC00494-203ENST00000433094 HSP90AA2PQ14568 343 aaPredicted RBP13.31□□□□□ -0.28
LINC00494-203ENST00000433094 ARXQ96QS3 562 aa13.3□□□□□ -0.28
LINC00494-203ENST00000433094 RRAGDQ9NQL2 400 aaPredicted RBP13.3□□□□□ -0.28
LINC00494-203ENST00000433094 MAP3K1Q13233 1512 aa13.3□□□□□ -0.28
LINC00494-203ENST00000433094 RRP1P56182 461 aaKnown RBP13.3□□□□□ -0.28
LINC00494-203ENST00000433094 UACAQ9BZF9 1416 aa13.29□□□□□ -0.28
LINC00494-203ENST00000433094 TULP1O00294 542 aaPredicted RBP13.28□□□□□ -0.28
LINC00494-203ENST00000433094 NAP1L5Q96NT1 182 aaPredicted RBP13.28□□□□□ -0.28
LINC00494-203ENST00000433094 CCDC18Q5T9S5 1454 aa13.28□□□□□ -0.28
LINC00494-203ENST00000433094 NCOA1Q15788 1441 aa13.27□□□□□ -0.28
LINC00494-203ENST00000433094 KDM5BQ9UGL1 1544 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms