RNA–Protein interactions for RNA: ENST00000431877.6

SSFA2-205, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 5,150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-205ENST00000431877 CFDP1Q9UEE9 299 aaPredicted RBP21.35■■□□□ 1.01
SSFA2-205ENST00000431877 VPS8Q8N3P4 1428 aa21.33■■□□□ 1.01
SSFA2-205ENST00000431877 EIF4G2P78344 907 aaKnown RBP eCLIP21.32■■□□□ 1
SSFA2-205ENST00000431877 CCNB3Q8WWL7 1395 aa21.32■■□□□ 1
SSFA2-205ENST00000431877 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
SSFA2-205ENST00000431877 ESF1Q9H501 851 aaKnown RBP21.31■■□□□ 1
SSFA2-205ENST00000431877 ERCC6Q03468 1493 aa21.31■■□□□ 1
SSFA2-205ENST00000431877 CANXP27824 592 aaKnown RBP21.3■■□□□ 1
SSFA2-205ENST00000431877 RTL5Q5HYW3 569 aaPredicted RBP21.3■■□□□ 1
SSFA2-205ENST00000431877 SIN3AQ96ST3 1273 aa21.29■■□□□ 1
SSFA2-205ENST00000431877 STAG3Q9UJ98 1225 aa21.28■■□□□ 1
SSFA2-205ENST00000431877 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
SSFA2-205ENST00000431877 KANK4Q5T7N3 995 aaPredicted RBP21.28■■□□□ 1
SSFA2-205ENST00000431877 TMC1Q8TDI8 760 aa21.26■□□□□ 0.99
SSFA2-205ENST00000431877 MRS2Q9HD23 443 aa21.26■□□□□ 0.99
SSFA2-205ENST00000431877 SALL2Q9Y467 1007 aaPredicted RBP21.26■□□□□ 0.99
SSFA2-205ENST00000431877 NEFMP07197 916 aa21.26■□□□□ 0.99
SSFA2-205ENST00000431877 SMARCA4P51532 1647 aa21.26■□□□□ 0.99
SSFA2-205ENST00000431877 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
SSFA2-205ENST00000431877 TDRD9Q8NDG6 1382 aaKnown RBP21.21■□□□□ 0.99
SSFA2-205ENST00000431877 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
SSFA2-205ENST00000431877 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
SSFA2-205ENST00000431877 RGL3Q3MIN7 710 aa21.19■□□□□ 0.98
SSFA2-205ENST00000431877 PDS5BQ9NTI5 1447 aa21.15■□□□□ 0.98
SSFA2-205ENST00000431877 SLC24A1O60721 1099 aa21.15■□□□□ 0.98
SSFA2-205ENST00000431877 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.98
SSFA2-205ENST00000431877 BCL11AQ9H165 835 aa21.14■□□□□ 0.97
SSFA2-205ENST00000431877 RUSC2Q8N2Y8 1516 aa21.13■□□□□ 0.97
SSFA2-205ENST00000431877 ZBTB47Q9UFB7 747 aaPredicted RBP21.13■□□□□ 0.97
SSFA2-205ENST00000431877 RAPGEF2Q9Y4G8 1499 aa21.1■□□□□ 0.97
SSFA2-205ENST00000431877 SETD5Q9C0A6 1442 aa21.04■□□□□ 0.96
SSFA2-205ENST00000431877 WDR43Q15061 677 aaKnown RBP eCLIP21.04■□□□□ 0.96
SSFA2-205ENST00000431877 ARHGAP35Q9NRY4 1499 aa21.03■□□□□ 0.96
SSFA2-205ENST00000431877 IRX6P78412 446 aaPredicted RBP21.03■□□□□ 0.96
SSFA2-205ENST00000431877 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
SSFA2-205ENST00000431877 CARD11Q9BXL7 1154 aa21.02■□□□□ 0.96
SSFA2-205ENST00000431877 ANP32AP39687 249 aaKnown RBP21.01■□□□□ 0.95
SSFA2-205ENST00000431877 NPM2Q86SE8 214 aaKnown RBP21■□□□□ 0.95
SSFA2-205ENST00000431877 FMN1Q68DA7 1419 aa20.99■□□□□ 0.95
SSFA2-205ENST00000431877 CCDC136Q96JN2 1154 aa20.98■□□□□ 0.95
SSFA2-205ENST00000431877 TIMELESSQ9UNS1 1208 aa20.96■□□□□ 0.95
SSFA2-205ENST00000431877 RAB3GAP2Q9H2M9 1393 aa20.95■□□□□ 0.94
SSFA2-205ENST00000431877 FHOD3Q2V2M9 1422 aa20.95■□□□□ 0.94
SSFA2-205ENST00000431877 SENP3-EIF4A1A0A087X0R7 540 aa20.94■□□□□ 0.94
SSFA2-205ENST00000431877 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.93
SSFA2-205ENST00000431877 FOXD1Q16676 465 aa20.88■□□□□ 0.93
SSFA2-205ENST00000431877 CARMIL2Q6F5E8 1435 aa20.88■□□□□ 0.93
SSFA2-205ENST00000431877 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.86■□□□□ 0.93
SSFA2-205ENST00000431877 DCAF11Q8TEB1 546 aa20.86■□□□□ 0.93
SSFA2-205ENST00000431877 PPP1R15AO75807 674 aaPredicted RBP20.83■□□□□ 0.93
SSFA2-205ENST00000431877 KNSTRNQ9Y448 316 aa20.83■□□□□ 0.92
SSFA2-205ENST00000431877 CDCA8Q53HL2 280 aa20.82■□□□□ 0.92
SSFA2-205ENST00000431877 PKD2Q13563 968 aa20.82■□□□□ 0.92
SSFA2-205ENST00000431877 SUPT16HQ9Y5B9 1047 aaKnown RBP20.8■□□□□ 0.92
SSFA2-205ENST00000431877 MPHOSPH9Q99550 1183 aa20.79■□□□□ 0.92
SSFA2-205ENST00000431877 HSPA5P11021 654 aaKnown RBP20.77■□□□□ 0.92
SSFA2-205ENST00000431877 IGF1RP08069 1367 aa20.77■□□□□ 0.92
SSFA2-205ENST00000431877 NCAPD3P42695 1498 aa20.76■□□□□ 0.91
SSFA2-205ENST00000431877 FGD5Q6ZNL6 1462 aa20.73■□□□□ 0.91
SSFA2-205ENST00000431877 JPH4Q96JJ6 628 aa20.73■□□□□ 0.91
SSFA2-205ENST00000431877 ARID4BQ4LE39 1312 aaPredicted RBP20.71■□□□□ 0.91
SSFA2-205ENST00000431877 NUP155O75694 1391 aa20.7■□□□□ 0.9
SSFA2-205ENST00000431877 UPF2Q9HAU5 1272 aaKnown RBP20.69■□□□□ 0.9
SSFA2-205ENST00000431877 CC2D1BQ5T0F9 858 aaKnown RBP20.69■□□□□ 0.9
SSFA2-205ENST00000431877 RAD54L2Q9Y4B4 1467 aa20.68■□□□□ 0.9
SSFA2-205ENST00000431877 DHX57Q6P158 1386 aaKnown RBP20.67■□□□□ 0.9
SSFA2-205ENST00000431877 ANKRD30AQ9BXX3 1397 aa20.67■□□□□ 0.9
SSFA2-205ENST00000431877 CCER2I3L3R5 266 aa20.66■□□□□ 0.9
SSFA2-205ENST00000431877 CFAP53Q96M91 514 aa20.66■□□□□ 0.9
SSFA2-205ENST00000431877 EFCAB2Q5VUJ9 269 aa20.65■□□□□ 0.9
SSFA2-205ENST00000431877 TMF1P82094 1093 aa20.65■□□□□ 0.9
SSFA2-205ENST00000431877 KANK1Q14678 1352 aa20.65■□□□□ 0.9
SSFA2-205ENST00000431877 HNRNPMP52272 730 aaKnown RBP eCLIP20.65■□□□□ 0.9
SSFA2-205ENST00000431877 L3MBTL2Q969R5 705 aa20.64■□□□□ 0.89
SSFA2-205ENST00000431877 CCDC18Q5T9S5 1454 aa20.63■□□□□ 0.89
SSFA2-205ENST00000431877 GGT6Q6P531 493 aa20.62■□□□□ 0.89
SSFA2-205ENST00000431877 PPM1GO15355 546 aaPredicted RBP20.61■□□□□ 0.89
SSFA2-205ENST00000431877 NEUROD2Q15784 382 aa20.61■□□□□ 0.89
SSFA2-205ENST00000431877 POGKQ9P215 609 aa20.61■□□□□ 0.89
SSFA2-205ENST00000431877 TNNT2P45379 298 aaPredicted RBP20.61■□□□□ 0.89
SSFA2-205ENST00000431877 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
SSFA2-205ENST00000431877 HSP90AA1P07900 732 aaKnown RBP20.59■□□□□ 0.89
SSFA2-205ENST00000431877 PLEKHG5O94827 1062 aa20.58■□□□□ 0.89
SSFA2-205ENST00000431877 C14orf37Q86TY3 774 aa20.57■□□□□ 0.88
SSFA2-205ENST00000431877 KIF21BO75037 1637 aa20.55■□□□□ 0.88
SSFA2-205ENST00000431877 SYNJ1O43426 1573 aa20.54■□□□□ 0.88
SSFA2-205ENST00000431877 MLECQ14165 292 aa20.53■□□□□ 0.88
SSFA2-205ENST00000431877 CFTRP13569 1480 aa20.53■□□□□ 0.88
SSFA2-205ENST00000431877 ZBTB7CA1YPR0 619 aa20.52■□□□□ 0.88
SSFA2-205ENST00000431877 PPP4R2Q9NY27 417 aa20.52■□□□□ 0.88
SSFA2-205ENST00000431877 NBR1Q14596 966 aa20.52■□□□□ 0.88
SSFA2-205ENST00000431877 ROCK2O75116 1388 aaKnown RBP20.5■□□□□ 0.87
SSFA2-205ENST00000431877 RSPH4AQ5TD94 716 aa20.5■□□□□ 0.87
SSFA2-205ENST00000431877 KIF3BO15066 747 aa20.49■□□□□ 0.87
SSFA2-205ENST00000431877 SAFB2Q14151 953 aaKnown RBP eCLIP20.48■□□□□ 0.87
SSFA2-205ENST00000431877 NUDCQ9Y266 331 aa20.48■□□□□ 0.87
SSFA2-205ENST00000431877 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
SSFA2-205ENST00000431877 B4GALNT3Q6L9W6 998 aa20.46■□□□□ 0.87
SSFA2-205ENST00000431877 MYH16Q9H6N6 1097 aa20.46■□□□□ 0.87
SSFA2-205ENST00000431877 PTPRGP23470 1445 aa20.45■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms