RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CUL7Q14999 1698 aa29.55■■■□□ 2.32
HMGN1-206ENST00000431390 ERCC6L2Q5T890 1561 aa29.53■■■□□ 2.32
HMGN1-206ENST00000431390 GRIN2AQ12879 1464 aa29.52■■■□□ 2.32
HMGN1-206ENST00000431390 ADAMTS12P58397 1594 aa29.51■■■□□ 2.31
HMGN1-206ENST00000431390 RAPGEF2Q9Y4G8 1499 aa29.5■■■□□ 2.31
HMGN1-206ENST00000431390 CARMIL1Q5VZK9 1371 aa29.49■■■□□ 2.31
HMGN1-206ENST00000431390 EHMT2Q96KQ7 1210 aa29.48■■■□□ 2.31
HMGN1-206ENST00000431390 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
HMGN1-206ENST00000431390 TNIKQ9UKE5 1360 aa29.43■■■□□ 2.3
HMGN1-206ENST00000431390 NUP160Q12769 1436 aa29.41■■■□□ 2.3
HMGN1-206ENST00000431390 UBTFP17480 764 aaKnown RBP29.38■■■□□ 2.29
HMGN1-206ENST00000431390 SHROOM2Q13796 1616 aa29.38■■■□□ 2.29
HMGN1-206ENST00000431390 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
HMGN1-206ENST00000431390 FHAD1B1AJZ9 1412 aa29.33■■■□□ 2.29
HMGN1-206ENST00000431390 KIF13AQ9H1H9 1805 aa29.22■■■□□ 2.27
HMGN1-206ENST00000431390 CEP162Q5TB80 1403 aa29.21■■■□□ 2.27
HMGN1-206ENST00000431390 CTTNBP2Q8WZ74 1663 aa29.17■■■□□ 2.26
HMGN1-206ENST00000431390 PRG4Q92954 1404 aaPredicted RBP29.15■■■□□ 2.26
HMGN1-206ENST00000431390 CLIP1P30622 1438 aa29.07■■■□□ 2.24
HMGN1-206ENST00000431390 JPH4Q96JJ6 628 aa29.07■■■□□ 2.24
HMGN1-206ENST00000431390 ADCY10Q96PN6 1610 aa28.94■■■□□ 2.22
HMGN1-206ENST00000431390 IQGAP2Q13576 1575 aa28.93■■■□□ 2.22
HMGN1-206ENST00000431390 ABCC10Q5T3U5 1492 aa28.92■■■□□ 2.22
HMGN1-206ENST00000431390 KIAA0586Q9BVV6 1533 aa28.92■■■□□ 2.22
HMGN1-206ENST00000431390 MAPKBP1O60336 1514 aa28.91■■■□□ 2.22
HMGN1-206ENST00000431390 EFCAB5A4FU69 1503 aa28.9■■■□□ 2.22
HMGN1-206ENST00000431390 RANGAP1P46060 587 aaPredicted RBP28.9■■■□□ 2.22
HMGN1-206ENST00000431390 ARHGAP35Q9NRY4 1499 aa28.9■■■□□ 2.22
HMGN1-206ENST00000431390 DIP2BQ9P265 1576 aa28.9■■■□□ 2.22
HMGN1-206ENST00000431390 FAM69CQ0P6D2 419 aa28.88■■■□□ 2.21
HMGN1-206ENST00000431390 NPM1P06748 294 aaKnown RBP eCLIP28.87■■■□□ 2.21
HMGN1-206ENST00000431390 SAMD9Q5K651 1589 aa28.82■■■□□ 2.2
HMGN1-206ENST00000431390 UGGT2Q9NYU1 1516 aa28.81■■■□□ 2.2
HMGN1-206ENST00000431390 TSPOAP1O95153 1857 aa28.8■■■□□ 2.2
HMGN1-206ENST00000431390 VPS8Q8N3P4 1428 aa28.79■■■□□ 2.2
HMGN1-206ENST00000431390 KDM6BO15054 1643 aa28.75■■■□□ 2.19
HMGN1-206ENST00000431390 FHOD3Q2V2M9 1422 aa28.67■■■□□ 2.18
HMGN1-206ENST00000431390 KIAA0556O60303 1618 aa28.65■■■□□ 2.18
HMGN1-206ENST00000431390 DISP1Q96F81 1524 aa28.64■■■□□ 2.17
HMGN1-206ENST00000431390 PTPRGP23470 1445 aa28.62■■■□□ 2.17
HMGN1-206ENST00000431390 P3H3Q8IVL6 736 aa28.62■■■□□ 2.17
HMGN1-206ENST00000431390 TTBK1Q5TCY1 1321 aaPredicted RBP28.62■■■□□ 2.17
HMGN1-206ENST00000431390 FMN1Q68DA7 1419 aa28.6■■■□□ 2.17
HMGN1-206ENST00000431390 CARMIL2Q6F5E8 1435 aa28.57■■■□□ 2.16
HMGN1-206ENST00000431390 ABCC2Q92887 1545 aa28.55■■■□□ 2.16
HMGN1-206ENST00000431390 KDM4FA0A1W2PPD8 638 aa28.54■■■□□ 2.16
HMGN1-206ENST00000431390 PPRC1Q5VV67 1664 aaKnown RBP28.52■■■□□ 2.16
HMGN1-206ENST00000431390 PCF11O94913 1555 aaKnown RBP28.51■■■□□ 2.16
HMGN1-206ENST00000431390 FYCO1Q9BQS8 1478 aa28.49■■■□□ 2.15
HMGN1-206ENST00000431390 ASXL2Q76L83 1435 aa28.49■■■□□ 2.15
HMGN1-206ENST00000431390 CASKIN1Q8WXD9 1431 aa28.49■■■□□ 2.15
HMGN1-206ENST00000431390 GLI2P10070 1586 aa28.47■■■□□ 2.15
HMGN1-206ENST00000431390 PLB1Q6P1J6 1458 aa28.45■■■□□ 2.15
HMGN1-206ENST00000431390 APLP2Q06481 763 aa28.45■■■□□ 2.14
HMGN1-206ENST00000431390 UHRF1BP1LA0JNW5 1464 aa28.45■■■□□ 2.14
HMGN1-206ENST00000431390 MAP3K1Q13233 1512 aa28.42■■■□□ 2.14
HMGN1-206ENST00000431390 UACAQ9BZF9 1416 aa28.41■■■□□ 2.14
HMGN1-206ENST00000431390 HECW1Q76N89 1606 aa28.36■■■□□ 2.13
HMGN1-206ENST00000431390 CFAP43Q8NDM7 1665 aa28.36■■■□□ 2.13
HMGN1-206ENST00000431390 TIAM1Q13009 1591 aa28.36■■■□□ 2.13
HMGN1-206ENST00000431390 ZCCHC11Q5TAX3 1644 aaKnown RBP28.35■■■□□ 2.13
HMGN1-206ENST00000431390 MAP3K4Q9Y6R4 1608 aa28.35■■■□□ 2.13
HMGN1-206ENST00000431390 KDM5BQ9UGL1 1544 aa28.33■■■□□ 2.13
HMGN1-206ENST00000431390 RAPGEF6Q8TEU7 1601 aa28.33■■■□□ 2.13
HMGN1-206ENST00000431390 EPRSP07814 1512 aaKnown RBP28.32■■■□□ 2.12
HMGN1-206ENST00000431390 LRRIQ1Q96JM4 1722 aa28.3■■■□□ 2.12
HMGN1-206ENST00000431390 CCDC18Q5T9S5 1454 aa28.28■■■□□ 2.12
HMGN1-206ENST00000431390 COL17A1Q9UMD9 1497 aaPredicted RBP28.28■■■□□ 2.12
HMGN1-206ENST00000431390 PPARGC1BQ86YN6 1023 aaKnown RBP28.28■■■□□ 2.12
HMGN1-206ENST00000431390 ATP1B4Q9UN42 357 aaPredicted RBP28.28■■■□□ 2.12
HMGN1-206ENST00000431390 ADGRL1O94910 1474 aa28.27■■■□□ 2.12
HMGN1-206ENST00000431390 ABCA8O94911 1581 aa28.26■■■□□ 2.11
HMGN1-206ENST00000431390 TEX14Q8IWB6 1497 aa28.22■■■□□ 2.11
HMGN1-206ENST00000431390 NUP153P49790 1475 aaKnown RBP28.21■■■□□ 2.11
HMGN1-206ENST00000431390 LRRC9Q6ZRR7 1453 aa28.2■■■□□ 2.1
HMGN1-206ENST00000431390 KANK4Q5T7N3 995 aaPredicted RBP28.19■■■□□ 2.1
HMGN1-206ENST00000431390 WDR7Q9Y4E6 1490 aa28.16■■■□□ 2.1
HMGN1-206ENST00000431390 TRIM26Q12899 539 aaPredicted RBP28.16■■■□□ 2.1
HMGN1-206ENST00000431390 CDK13Q14004 1512 aaKnown RBP28.13■■■□□ 2.09
HMGN1-206ENST00000431390 EHBP1L1Q8N3D4 1523 aa28.09■■■□□ 2.09
HMGN1-206ENST00000431390 MTUS2Q5JR59 1369 aa28.06■■■□□ 2.08
HMGN1-206ENST00000431390 MAGI3Q5TCQ9 1506 aa28.03■■■□□ 2.08
HMGN1-206ENST00000431390 HECW2Q9P2P5 1572 aa28.03■■■□□ 2.08
HMGN1-206ENST00000431390 ATP10BO94823 1461 aa28.02■■■□□ 2.08
HMGN1-206ENST00000431390 ILDR1Q86SU0 546 aaPredicted RBP28.02■■■□□ 2.08
HMGN1-206ENST00000431390 CD109Q6YHK3 1445 aa28.01■■■□□ 2.07
HMGN1-206ENST00000431390 SUPT6HQ7KZ85 1726 aaKnown RBP28■■■□□ 2.07
HMGN1-206ENST00000431390 CDK11AQ9UQ88 783 aaPredicted RBP28■■■□□ 2.07
HMGN1-206ENST00000431390 ARID3CA6NKF2 412 aa27.99■■■□□ 2.07
HMGN1-206ENST00000431390 KCNH8Q96L42 1107 aa27.99■■■□□ 2.07
HMGN1-206ENST00000431390 PCGF6Q9BYE7 350 aa27.96■■■□□ 2.07
HMGN1-206ENST00000431390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.95■■■□□ 2.07
HMGN1-206ENST00000431390 HNRNPUL2Q1KMD3 747 aaKnown RBP27.95■■■□□ 2.07
HMGN1-206ENST00000431390 TROQ12816 1431 aaPredicted RBP27.92■■■□□ 2.06
HMGN1-206ENST00000431390 NCOA2Q15596 1464 aa27.91■■■□□ 2.06
HMGN1-206ENST00000431390 RRBP1Q9P2E9 1410 aaKnown RBP27.89■■■□□ 2.05
HMGN1-206ENST00000431390 PHLDB1Q86UU1 1377 aa27.88■■■□□ 2.05
HMGN1-206ENST00000431390 PLEKHD1A6NEE1 506 aa27.86■■■□□ 2.05
HMGN1-206ENST00000431390 KIF14Q15058 1648 aa27.8■■■□□ 2.04
HMGN1-206ENST00000431390 ARAP3Q8WWN8 1544 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms