RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 RUSC2Q8N2Y8 1516 aa23.69■■□□□ 1.38
GCSHP3-201ENST00000431120 KIAA0586Q9BVV6 1533 aa23.65■■□□□ 1.38
GCSHP3-201ENST00000431120 CUL7Q14999 1698 aa23.64■■□□□ 1.38
GCSHP3-201ENST00000431120 NPM1P06748 294 aaKnown RBP eCLIP23.57■■□□□ 1.36
GCSHP3-201ENST00000431120 CARMIL1Q5VZK9 1371 aa23.54■■□□□ 1.36
GCSHP3-201ENST00000431120 MAPKBP1O60336 1514 aa23.51■■□□□ 1.35
GCSHP3-201ENST00000431120 KIF13AQ9H1H9 1805 aa23.49■■□□□ 1.35
GCSHP3-201ENST00000431120 ABCC10Q5T3U5 1492 aa23.49■■□□□ 1.35
GCSHP3-201ENST00000431120 AEBP2Q6ZN18 517 aaPredicted RBP23.46■■□□□ 1.35
GCSHP3-201ENST00000431120 ADCY10Q96PN6 1610 aa23.45■■□□□ 1.34
GCSHP3-201ENST00000431120 FAM69CQ0P6D2 419 aa23.44■■□□□ 1.34
GCSHP3-201ENST00000431120 CARMIL2Q6F5E8 1435 aa23.43■■□□□ 1.34
GCSHP3-201ENST00000431120 PTPRGP23470 1445 aa23.42■■□□□ 1.34
GCSHP3-201ENST00000431120 TNIKQ9UKE5 1360 aa23.4■■□□□ 1.34
GCSHP3-201ENST00000431120 IQGAP2Q13576 1575 aa23.37■■□□□ 1.33
GCSHP3-201ENST00000431120 DIP2BQ9P265 1576 aa23.37■■□□□ 1.33
GCSHP3-201ENST00000431120 RAPGEF2Q9Y4G8 1499 aa23.33■■□□□ 1.33
GCSHP3-201ENST00000431120 ABCC2Q92887 1545 aa23.3■■□□□ 1.32
GCSHP3-201ENST00000431120 UHRF1BP1LA0JNW5 1464 aa23.28■■□□□ 1.32
GCSHP3-201ENST00000431120 DISP1Q96F81 1524 aa23.26■■□□□ 1.31
GCSHP3-201ENST00000431120 UGGT2Q9NYU1 1516 aa23.25■■□□□ 1.31
GCSHP3-201ENST00000431120 UACAQ9BZF9 1416 aa23.25■■□□□ 1.31
GCSHP3-201ENST00000431120 PLB1Q6P1J6 1458 aa23.24■■□□□ 1.31
GCSHP3-201ENST00000431120 TTBK1Q5TCY1 1321 aaPredicted RBP23.23■■□□□ 1.31
GCSHP3-201ENST00000431120 ASXL2Q76L83 1435 aa23.19■■□□□ 1.3
GCSHP3-201ENST00000431120 KDM6BO15054 1643 aa23.17■■□□□ 1.3
GCSHP3-201ENST00000431120 GLI2P10070 1586 aa23.17■■□□□ 1.3
GCSHP3-201ENST00000431120 KDM5BQ9UGL1 1544 aa23.16■■□□□ 1.3
GCSHP3-201ENST00000431120 KIAA0556O60303 1618 aa23.15■■□□□ 1.3
GCSHP3-201ENST00000431120 TSPOAP1O95153 1857 aa23.13■■□□□ 1.29
GCSHP3-201ENST00000431120 GOLGA3Q08378 1498 aa23.11■■□□□ 1.29
GCSHP3-201ENST00000431120 PRXQ9BXM0 1461 aa23.09■■□□□ 1.29
GCSHP3-201ENST00000431120 CTTNBP2Q8WZ74 1663 aa23.06■■□□□ 1.28
GCSHP3-201ENST00000431120 EPRSP07814 1512 aaKnown RBP23.06■■□□□ 1.28
GCSHP3-201ENST00000431120 ZCCHC11Q5TAX3 1644 aaKnown RBP23.03■■□□□ 1.28
GCSHP3-201ENST00000431120 PPRC1Q5VV67 1664 aaKnown RBP23.01■■□□□ 1.27
GCSHP3-201ENST00000431120 TEX14Q8IWB6 1497 aa23■■□□□ 1.27
GCSHP3-201ENST00000431120 WDR7Q9Y4E6 1490 aa22.98■■□□□ 1.27
GCSHP3-201ENST00000431120 MAP3K4Q9Y6R4 1608 aa22.98■■□□□ 1.27
GCSHP3-201ENST00000431120 FAM9AQ8IZU1 332 aaPredicted RBP22.98■■□□□ 1.27
GCSHP3-201ENST00000431120 KDM4FA0A1W2PPD8 638 aa22.95■■□□□ 1.26
GCSHP3-201ENST00000431120 ABCA8O94911 1581 aa22.95■■□□□ 1.26
GCSHP3-201ENST00000431120 CSRNP3Q8WYN3 585 aa22.92■■□□□ 1.26
GCSHP3-201ENST00000431120 COL17A1Q9UMD9 1497 aaPredicted RBP22.89■■□□□ 1.25
GCSHP3-201ENST00000431120 EEA1Q15075 1411 aa22.87■■□□□ 1.25
GCSHP3-201ENST00000431120 MAGI3Q5TCQ9 1506 aa22.87■■□□□ 1.25
GCSHP3-201ENST00000431120 CD109Q6YHK3 1445 aa22.85■■□□□ 1.25
GCSHP3-201ENST00000431120 CFAP43Q8NDM7 1665 aa22.83■■□□□ 1.24
GCSHP3-201ENST00000431120 KCNH8Q96L42 1107 aa22.82■■□□□ 1.24
GCSHP3-201ENST00000431120 SAMD9Q5K651 1589 aa22.77■■□□□ 1.24
GCSHP3-201ENST00000431120 P3H3Q8IVL6 736 aa22.77■■□□□ 1.24
GCSHP3-201ENST00000431120 ATP10BO94823 1461 aa22.77■■□□□ 1.24
GCSHP3-201ENST00000431120 ADGRL1O94910 1474 aa22.76■■□□□ 1.23
GCSHP3-201ENST00000431120 PHLDB1Q86UU1 1377 aa22.72■■□□□ 1.23
GCSHP3-201ENST00000431120 RAPGEF6Q8TEU7 1601 aa22.68■■□□□ 1.22
GCSHP3-201ENST00000431120 ARAP3Q8WWN8 1544 aa22.68■■□□□ 1.22
GCSHP3-201ENST00000431120 ARID3CA6NKF2 412 aa22.66■■□□□ 1.22
GCSHP3-201ENST00000431120 ABCA9Q8IUA7 1624 aa22.66■■□□□ 1.22
GCSHP3-201ENST00000431120 NUP153P49790 1475 aaKnown RBP22.61■■□□□ 1.21
GCSHP3-201ENST00000431120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.61■■□□□ 1.21
GCSHP3-201ENST00000431120 HNRNPUL2Q1KMD3 747 aaKnown RBP22.61■■□□□ 1.21
GCSHP3-201ENST00000431120 KIF21BO75037 1637 aa22.6■■□□□ 1.21
GCSHP3-201ENST00000431120 EFCAB5A4FU69 1503 aa22.6■■□□□ 1.21
GCSHP3-201ENST00000431120 NEO1Q92859 1461 aa22.6■■□□□ 1.21
GCSHP3-201ENST00000431120 FHOD3Q2V2M9 1422 aa22.59■■□□□ 1.21
GCSHP3-201ENST00000431120 PLEKHD1A6NEE1 506 aa22.57■■□□□ 1.2
GCSHP3-201ENST00000431120 RANGAP1P46060 587 aaPredicted RBP22.55■■□□□ 1.2
GCSHP3-201ENST00000431120 RAPGEF3O95398 923 aa22.48■■□□□ 1.19
GCSHP3-201ENST00000431120 UBTFP17480 764 aaKnown RBP22.44■■□□□ 1.18
GCSHP3-201ENST00000431120 HECW2Q9P2P5 1572 aa22.43■■□□□ 1.18
GCSHP3-201ENST00000431120 FMN1Q68DA7 1419 aa22.42■■□□□ 1.18
GCSHP3-201ENST00000431120 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
GCSHP3-201ENST00000431120 DENND4BO75064 1496 aaPredicted RBP22.41■■□□□ 1.18
GCSHP3-201ENST00000431120 CFAP74Q9C0B2 1584 aa22.41■■□□□ 1.18
GCSHP3-201ENST00000431120 AKNAQ7Z591 1439 aa22.4■■□□□ 1.18
GCSHP3-201ENST00000431120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.4■■□□□ 1.18
GCSHP3-201ENST00000431120 FANCAO15360 1455 aa22.4■■□□□ 1.18
GCSHP3-201ENST00000431120 FRMPD1Q5SYB0 1578 aa22.39■■□□□ 1.18
GCSHP3-201ENST00000431120 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
GCSHP3-201ENST00000431120 ADAMTSL3P82987 1691 aa22.36■■□□□ 1.17
GCSHP3-201ENST00000431120 CDK13Q14004 1512 aaKnown RBP22.34■■□□□ 1.17
GCSHP3-201ENST00000431120 PTPRMP28827 1452 aa22.34■■□□□ 1.17
GCSHP3-201ENST00000431120 ARHGAP35Q9NRY4 1499 aa22.34■■□□□ 1.17
GCSHP3-201ENST00000431120 TTC37Q6PGP7 1564 aa22.33■■□□□ 1.16
GCSHP3-201ENST00000431120 ARID4BQ4LE39 1312 aaPredicted RBP22.32■■□□□ 1.16
GCSHP3-201ENST00000431120 ARHGEF40Q8TER5 1519 aa22.32■■□□□ 1.16
GCSHP3-201ENST00000431120 HECW1Q76N89 1606 aa22.32■■□□□ 1.16
GCSHP3-201ENST00000431120 RICTORQ6R327 1708 aa22.32■■□□□ 1.16
GCSHP3-201ENST00000431120 PLCH2O75038 1416 aa22.31■■□□□ 1.16
GCSHP3-201ENST00000431120 MAGI2Q86UL8 1455 aa22.31■■□□□ 1.16
GCSHP3-201ENST00000431120 ZMYM4Q5VZL5 1548 aa22.31■■□□□ 1.16
GCSHP3-201ENST00000431120 BCORL1Q5H9F3 1711 aa22.3■■□□□ 1.16
GCSHP3-201ENST00000431120 POGZQ7Z3K3 1410 aa22.27■■□□□ 1.16
GCSHP3-201ENST00000431120 ATP1B4Q9UN42 357 aaPredicted RBP22.27■■□□□ 1.16
GCSHP3-201ENST00000431120 EFCAB2Q5VUJ9 269 aa22.26■■□□□ 1.15
GCSHP3-201ENST00000431120 ILDR1Q86SU0 546 aaPredicted RBP22.26■■□□□ 1.15
GCSHP3-201ENST00000431120 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
GCSHP3-201ENST00000431120 SCAPERQ9BY12 1400 aa22.24■■□□□ 1.15
GCSHP3-201ENST00000431120 ZFYVE16Q7Z3T8 1539 aa22.24■■□□□ 1.15
GCSHP3-201ENST00000431120 TROQ12816 1431 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms