RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
HMGN1P38-201ENST00000431116 KIF27Q86VH2 1401 aa17.7■□□□□ 0.42
HMGN1P38-201ENST00000431116 CUL7Q14999 1698 aa17.7■□□□□ 0.42
HMGN1P38-201ENST00000431116 PRG4Q92954 1404 aaPredicted RBP17.64■□□□□ 0.42
HMGN1P38-201ENST00000431116 FOXD1Q16676 465 aa17.64■□□□□ 0.41
HMGN1P38-201ENST00000431116 IGF1RP08069 1367 aa17.63■□□□□ 0.41
HMGN1P38-201ENST00000431116 JPH4Q96JJ6 628 aa17.58■□□□□ 0.4
HMGN1P38-201ENST00000431116 KIAA0586Q9BVV6 1533 aa17.57■□□□□ 0.4
HMGN1P38-201ENST00000431116 CARMIL1Q5VZK9 1371 aa17.53■□□□□ 0.4
HMGN1P38-201ENST00000431116 KIF13AQ9H1H9 1805 aa17.48■□□□□ 0.39
HMGN1P38-201ENST00000431116 ADCY10Q96PN6 1610 aa17.47■□□□□ 0.39
HMGN1P38-201ENST00000431116 IQGAP2Q13576 1575 aa17.47■□□□□ 0.39
HMGN1P38-201ENST00000431116 RAPGEF2Q9Y4G8 1499 aa17.42■□□□□ 0.38
HMGN1P38-201ENST00000431116 MAPKBP1O60336 1514 aa17.42■□□□□ 0.38
HMGN1P38-201ENST00000431116 CARMIL2Q6F5E8 1435 aa17.39■□□□□ 0.38
HMGN1P38-201ENST00000431116 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
HMGN1P38-201ENST00000431116 PTPRGP23470 1445 aa17.37■□□□□ 0.37
HMGN1P38-201ENST00000431116 DIP2BQ9P265 1576 aa17.36■□□□□ 0.37
HMGN1P38-201ENST00000431116 CTTNBP2Q8WZ74 1663 aa17.36■□□□□ 0.37
HMGN1P38-201ENST00000431116 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
HMGN1P38-201ENST00000431116 ABCC10Q5T3U5 1492 aa17.35■□□□□ 0.37
HMGN1P38-201ENST00000431116 TTBK1Q5TCY1 1321 aaPredicted RBP17.34■□□□□ 0.37
HMGN1P38-201ENST00000431116 DISP1Q96F81 1524 aa17.34■□□□□ 0.37
HMGN1P38-201ENST00000431116 UGGT2Q9NYU1 1516 aa17.33■□□□□ 0.37
HMGN1P38-201ENST00000431116 KIAA0556O60303 1618 aa17.32■□□□□ 0.36
HMGN1P38-201ENST00000431116 PLPPR3Q6T4P5 718 aa17.31■□□□□ 0.36
HMGN1P38-201ENST00000431116 FAM69CQ0P6D2 419 aa17.29■□□□□ 0.36
HMGN1P38-201ENST00000431116 ABCC2Q92887 1545 aa17.29■□□□□ 0.36
HMGN1P38-201ENST00000431116 TSPOAP1O95153 1857 aa17.27■□□□□ 0.35
HMGN1P38-201ENST00000431116 UHRF1BP1LA0JNW5 1464 aa17.26■□□□□ 0.35
HMGN1P38-201ENST00000431116 PRXQ9BXM0 1461 aa17.26■□□□□ 0.35
HMGN1P38-201ENST00000431116 UACAQ9BZF9 1416 aa17.25■□□□□ 0.35
HMGN1P38-201ENST00000431116 ZCCHC11Q5TAX3 1644 aaKnown RBP17.21■□□□□ 0.35
HMGN1P38-201ENST00000431116 ASXL2Q76L83 1435 aa17.21■□□□□ 0.34
HMGN1P38-201ENST00000431116 GOLGA3Q08378 1498 aa17.2■□□□□ 0.34
HMGN1P38-201ENST00000431116 PLB1Q6P1J6 1458 aa17.19■□□□□ 0.34
HMGN1P38-201ENST00000431116 KDM5BQ9UGL1 1544 aa17.19■□□□□ 0.34
HMGN1P38-201ENST00000431116 KDM6BO15054 1643 aa17.18■□□□□ 0.34
HMGN1P38-201ENST00000431116 GLI2P10070 1586 aa17.16■□□□□ 0.34
HMGN1P38-201ENST00000431116 PPRC1Q5VV67 1664 aaKnown RBP17.15■□□□□ 0.34
HMGN1P38-201ENST00000431116 ABCA8O94911 1581 aa17.12■□□□□ 0.33
HMGN1P38-201ENST00000431116 EPRSP07814 1512 aaKnown RBP17.11■□□□□ 0.33
HMGN1P38-201ENST00000431116 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
HMGN1P38-201ENST00000431116 EEA1Q15075 1411 aa17.11■□□□□ 0.33
HMGN1P38-201ENST00000431116 MAP3K4Q9Y6R4 1608 aa17.1■□□□□ 0.33
HMGN1P38-201ENST00000431116 SAMD9Q5K651 1589 aa17.08■□□□□ 0.32
HMGN1P38-201ENST00000431116 WDR7Q9Y4E6 1490 aa17.08■□□□□ 0.32
HMGN1P38-201ENST00000431116 KIF21BO75037 1637 aa17.03■□□□□ 0.32
HMGN1P38-201ENST00000431116 TEX14Q8IWB6 1497 aa17.02■□□□□ 0.32
HMGN1P38-201ENST00000431116 P3H3Q8IVL6 736 aa17.02■□□□□ 0.32
HMGN1P38-201ENST00000431116 FAM9AQ8IZU1 332 aaPredicted RBP17.02■□□□□ 0.32
HMGN1P38-201ENST00000431116 CFAP43Q8NDM7 1665 aa17.01■□□□□ 0.31
HMGN1P38-201ENST00000431116 RAPGEF6Q8TEU7 1601 aa16.99■□□□□ 0.31
HMGN1P38-201ENST00000431116 ARID3CA6NKF2 412 aa16.97■□□□□ 0.31
HMGN1P38-201ENST00000431116 RANGAP1P46060 587 aaPredicted RBP16.95■□□□□ 0.3
HMGN1P38-201ENST00000431116 COL17A1Q9UMD9 1497 aaPredicted RBP16.94■□□□□ 0.3
HMGN1P38-201ENST00000431116 KCNH8Q96L42 1107 aa16.94■□□□□ 0.3
HMGN1P38-201ENST00000431116 FHOD3Q2V2M9 1422 aa16.94■□□□□ 0.3
HMGN1P38-201ENST00000431116 ATP10BO94823 1461 aa16.93■□□□□ 0.3
HMGN1P38-201ENST00000431116 EFCAB5A4FU69 1503 aa16.93■□□□□ 0.3
HMGN1P38-201ENST00000431116 CD109Q6YHK3 1445 aa16.93■□□□□ 0.3
HMGN1P38-201ENST00000431116 MAGI3Q5TCQ9 1506 aa16.92■□□□□ 0.3
HMGN1P38-201ENST00000431116 NUP153P49790 1475 aaKnown RBP16.9■□□□□ 0.3
HMGN1P38-201ENST00000431116 ABCA9Q8IUA7 1624 aa16.88■□□□□ 0.29
HMGN1P38-201ENST00000431116 KDM4FA0A1W2PPD8 638 aa16.85■□□□□ 0.29
HMGN1P38-201ENST00000431116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
HMGN1P38-201ENST00000431116 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
HMGN1P38-201ENST00000431116 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
HMGN1P38-201ENST00000431116 ADGRL1O94910 1474 aa16.83■□□□□ 0.28
HMGN1P38-201ENST00000431116 UBTFP17480 764 aaKnown RBP16.81■□□□□ 0.28
HMGN1P38-201ENST00000431116 ARAP3Q8WWN8 1544 aa16.79■□□□□ 0.28
HMGN1P38-201ENST00000431116 HECW1Q76N89 1606 aa16.77■□□□□ 0.27
HMGN1P38-201ENST00000431116 CDK13Q14004 1512 aaKnown RBP16.76■□□□□ 0.27
HMGN1P38-201ENST00000431116 ARHGAP35Q9NRY4 1499 aa16.76■□□□□ 0.27
HMGN1P38-201ENST00000431116 NEO1Q92859 1461 aa16.75■□□□□ 0.27
HMGN1P38-201ENST00000431116 TTC37Q6PGP7 1564 aa16.74■□□□□ 0.27
HMGN1P38-201ENST00000431116 FMN1Q68DA7 1419 aa16.74■□□□□ 0.27
HMGN1P38-201ENST00000431116 PLEKHD1A6NEE1 506 aa16.73■□□□□ 0.27
HMGN1P38-201ENST00000431116 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
HMGN1P38-201ENST00000431116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.72■□□□□ 0.27
HMGN1P38-201ENST00000431116 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
HMGN1P38-201ENST00000431116 FRMPD1Q5SYB0 1578 aa16.72■□□□□ 0.27
HMGN1P38-201ENST00000431116 CFAP74Q9C0B2 1584 aa16.71■□□□□ 0.27
HMGN1P38-201ENST00000431116 LRRIQ1Q96JM4 1722 aa16.67■□□□□ 0.26
HMGN1P38-201ENST00000431116 ADRA2BP18089 450 aa16.67■□□□□ 0.26
HMGN1P38-201ENST00000431116 RICTORQ6R327 1708 aa16.67■□□□□ 0.26
HMGN1P38-201ENST00000431116 FANCAO15360 1455 aa16.67■□□□□ 0.26
HMGN1P38-201ENST00000431116 RAPGEF3O95398 923 aa16.66■□□□□ 0.26
HMGN1P38-201ENST00000431116 ATP1B4Q9UN42 357 aaPredicted RBP16.66■□□□□ 0.26
HMGN1P38-201ENST00000431116 MYO5CQ9NQX4 1742 aa16.65■□□□□ 0.26
HMGN1P38-201ENST00000431116 PCF11O94913 1555 aaKnown RBP16.64■□□□□ 0.25
HMGN1P38-201ENST00000431116 KIF14Q15058 1648 aa16.63■□□□□ 0.25
HMGN1P38-201ENST00000431116 AKNAQ7Z591 1439 aa16.63■□□□□ 0.25
HMGN1P38-201ENST00000431116 ARHGEF40Q8TER5 1519 aa16.63■□□□□ 0.25
HMGN1P38-201ENST00000431116 DENND4BO75064 1496 aaPredicted RBP16.62■□□□□ 0.25
HMGN1P38-201ENST00000431116 CDK11AQ9UQ88 783 aaPredicted RBP16.59■□□□□ 0.25
HMGN1P38-201ENST00000431116 ZMYM4Q5VZL5 1548 aa16.59■□□□□ 0.25
HMGN1P38-201ENST00000431116 ADAMTSL3P82987 1691 aa16.59■□□□□ 0.25
HMGN1P38-201ENST00000431116 PLCH2O75038 1416 aa16.58■□□□□ 0.24
HMGN1P38-201ENST00000431116 TROQ12816 1431 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms