RNA–Protein interactions for RNA: ENST00000430433.5

MRPL55-221, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-221ENST00000430433 PRG4Q92954 1404 aaPredicted RBP19.29■□□□□ 0.68
MRPL55-221ENST00000430433 JPH4Q96JJ6 628 aa19.29■□□□□ 0.68
MRPL55-221ENST00000430433 KIAA0586Q9BVV6 1533 aa19.26■□□□□ 0.67
MRPL55-221ENST00000430433 TRHP20396 242 aaPredicted RBP19.22■□□□□ 0.67
MRPL55-221ENST00000430433 RAPGEF2Q9Y4G8 1499 aa19.2■□□□□ 0.66
MRPL55-221ENST00000430433 IQGAP2Q13576 1575 aa19.15■□□□□ 0.66
MRPL55-221ENST00000430433 CARMIL2Q6F5E8 1435 aa19.09■□□□□ 0.65
MRPL55-221ENST00000430433 PRXQ9BXM0 1461 aa19.07■□□□□ 0.64
MRPL55-221ENST00000430433 TTBK1Q5TCY1 1321 aaPredicted RBP19.05■□□□□ 0.64
MRPL55-221ENST00000430433 PTPRGP23470 1445 aa19.04■□□□□ 0.64
MRPL55-221ENST00000430433 CSRNP3Q8WYN3 585 aa19.03■□□□□ 0.64
MRPL55-221ENST00000430433 TNIKQ9UKE5 1360 aa19.03■□□□□ 0.64
MRPL55-221ENST00000430433 CTTNBP2Q8WZ74 1663 aa19.02■□□□□ 0.64
MRPL55-221ENST00000430433 EEA1Q15075 1411 aa19.02■□□□□ 0.64
MRPL55-221ENST00000430433 NPM1P06748 294 aaKnown RBP eCLIP19.02■□□□□ 0.64
MRPL55-221ENST00000430433 UGGT2Q9NYU1 1516 aa19.01■□□□□ 0.63
MRPL55-221ENST00000430433 ADCY10Q96PN6 1610 aa19■□□□□ 0.63
MRPL55-221ENST00000430433 DISP1Q96F81 1524 aa19■□□□□ 0.63
MRPL55-221ENST00000430433 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
MRPL55-221ENST00000430433 FAM9AQ8IZU1 332 aaPredicted RBP18.97■□□□□ 0.63
MRPL55-221ENST00000430433 KIAA0556O60303 1618 aa18.96■□□□□ 0.63
MRPL55-221ENST00000430433 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
MRPL55-221ENST00000430433 MAPKBP1O60336 1514 aa18.91■□□□□ 0.62
MRPL55-221ENST00000430433 UACAQ9BZF9 1416 aa18.9■□□□□ 0.62
MRPL55-221ENST00000430433 ABCC2Q92887 1545 aa18.88■□□□□ 0.61
MRPL55-221ENST00000430433 UHRF1BP1LA0JNW5 1464 aa18.87■□□□□ 0.61
MRPL55-221ENST00000430433 KIF13AQ9H1H9 1805 aa18.86■□□□□ 0.61
MRPL55-221ENST00000430433 ABCC10Q5T3U5 1492 aa18.85■□□□□ 0.61
MRPL55-221ENST00000430433 FAM69CQ0P6D2 419 aa18.85■□□□□ 0.61
MRPL55-221ENST00000430433 KIF21BO75037 1637 aa18.83■□□□□ 0.61
MRPL55-221ENST00000430433 DIP2BQ9P265 1576 aa18.82■□□□□ 0.6
MRPL55-221ENST00000430433 P3H3Q8IVL6 736 aa18.8■□□□□ 0.6
MRPL55-221ENST00000430433 PLB1Q6P1J6 1458 aa18.79■□□□□ 0.6
MRPL55-221ENST00000430433 ASXL2Q76L83 1435 aa18.79■□□□□ 0.6
MRPL55-221ENST00000430433 KDM5BQ9UGL1 1544 aa18.79■□□□□ 0.6
MRPL55-221ENST00000430433 RANGAP1P46060 587 aaPredicted RBP18.78■□□□□ 0.6
MRPL55-221ENST00000430433 EHMT2Q96KQ7 1210 aa18.76■□□□□ 0.59
MRPL55-221ENST00000430433 SAMD9Q5K651 1589 aa18.76■□□□□ 0.59
MRPL55-221ENST00000430433 ZCCHC11Q5TAX3 1644 aaKnown RBP18.75■□□□□ 0.59
MRPL55-221ENST00000430433 ABCA8O94911 1581 aa18.75■□□□□ 0.59
MRPL55-221ENST00000430433 UBTFP17480 764 aaKnown RBP18.72■□□□□ 0.59
MRPL55-221ENST00000430433 TSPOAP1O95153 1857 aa18.69■□□□□ 0.58
MRPL55-221ENST00000430433 FHOD3Q2V2M9 1422 aa18.67■□□□□ 0.58
MRPL55-221ENST00000430433 GLI2P10070 1586 aa18.67■□□□□ 0.58
MRPL55-221ENST00000430433 WDR7Q9Y4E6 1490 aa18.66■□□□□ 0.58
MRPL55-221ENST00000430433 EFCAB5A4FU69 1503 aa18.66■□□□□ 0.58
MRPL55-221ENST00000430433 EPRSP07814 1512 aaKnown RBP18.66■□□□□ 0.58
MRPL55-221ENST00000430433 ARID3CA6NKF2 412 aa18.66■□□□□ 0.58
MRPL55-221ENST00000430433 RAPGEF6Q8TEU7 1601 aa18.63■□□□□ 0.57
MRPL55-221ENST00000430433 ATP10BO94823 1461 aa18.59■□□□□ 0.57
MRPL55-221ENST00000430433 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
MRPL55-221ENST00000430433 KDM6BO15054 1643 aa18.59■□□□□ 0.57
MRPL55-221ENST00000430433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
MRPL55-221ENST00000430433 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
MRPL55-221ENST00000430433 MAP3K4Q9Y6R4 1608 aa18.58■□□□□ 0.56
MRPL55-221ENST00000430433 PPRC1Q5VV67 1664 aaKnown RBP18.57■□□□□ 0.56
MRPL55-221ENST00000430433 NUP153P49790 1475 aaKnown RBP18.56■□□□□ 0.56
MRPL55-221ENST00000430433 TEX14Q8IWB6 1497 aa18.55■□□□□ 0.56
MRPL55-221ENST00000430433 ARHGAP35Q9NRY4 1499 aa18.52■□□□□ 0.56
MRPL55-221ENST00000430433 CFAP43Q8NDM7 1665 aa18.51■□□□□ 0.55
MRPL55-221ENST00000430433 CD109Q6YHK3 1445 aa18.51■□□□□ 0.55
MRPL55-221ENST00000430433 FMN1Q68DA7 1419 aa18.5■□□□□ 0.55
MRPL55-221ENST00000430433 ATP1B4Q9UN42 357 aaPredicted RBP18.47■□□□□ 0.55
MRPL55-221ENST00000430433 MAGI3Q5TCQ9 1506 aa18.46■□□□□ 0.55
MRPL55-221ENST00000430433 PLEKHD1A6NEE1 506 aa18.45■□□□□ 0.54
MRPL55-221ENST00000430433 HECW1Q76N89 1606 aa18.44■□□□□ 0.54
MRPL55-221ENST00000430433 ABCA9Q8IUA7 1624 aa18.43■□□□□ 0.54
MRPL55-221ENST00000430433 CDK13Q14004 1512 aaKnown RBP18.43■□□□□ 0.54
MRPL55-221ENST00000430433 COL17A1Q9UMD9 1497 aaPredicted RBP18.41■□□□□ 0.54
MRPL55-221ENST00000430433 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
MRPL55-221ENST00000430433 CLIP1P30622 1438 aa18.4■□□□□ 0.54
MRPL55-221ENST00000430433 CDK11AQ9UQ88 783 aaPredicted RBP18.35■□□□□ 0.53
MRPL55-221ENST00000430433 PCF11O94913 1555 aaKnown RBP18.33■□□□□ 0.52
MRPL55-221ENST00000430433 CASKIN1Q8WXD9 1431 aa18.32■□□□□ 0.52
MRPL55-221ENST00000430433 PHLDB1Q86UU1 1377 aa18.32■□□□□ 0.52
MRPL55-221ENST00000430433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.32■□□□□ 0.52
MRPL55-221ENST00000430433 NEO1Q92859 1461 aa18.32■□□□□ 0.52
MRPL55-221ENST00000430433 ARAP3Q8WWN8 1544 aa18.31■□□□□ 0.52
MRPL55-221ENST00000430433 TTC37Q6PGP7 1564 aa18.3■□□□□ 0.52
MRPL55-221ENST00000430433 CCDC18Q5T9S5 1454 aa18.28■□□□□ 0.52
MRPL55-221ENST00000430433 FYCO1Q9BQS8 1478 aa18.28■□□□□ 0.52
MRPL55-221ENST00000430433 LRRIQ1Q96JM4 1722 aa18.28■□□□□ 0.52
MRPL55-221ENST00000430433 TROQ12816 1431 aaPredicted RBP18.27■□□□□ 0.52
MRPL55-221ENST00000430433 FANCAO15360 1455 aa18.26■□□□□ 0.51
MRPL55-221ENST00000430433 CEP162Q5TB80 1403 aa18.26■□□□□ 0.51
MRPL55-221ENST00000430433 KIF14Q15058 1648 aa18.26■□□□□ 0.51
MRPL55-221ENST00000430433 CFAP74Q9C0B2 1584 aa18.25■□□□□ 0.51
MRPL55-221ENST00000430433 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
MRPL55-221ENST00000430433 AKNAQ7Z591 1439 aa18.23■□□□□ 0.51
MRPL55-221ENST00000430433 KDM4FA0A1W2PPD8 638 aa18.21■□□□□ 0.51
MRPL55-221ENST00000430433 LOC105371045A0A1W2PR82 267 aa18.21■□□□□ 0.51
MRPL55-221ENST00000430433 PLCH2O75038 1416 aa18.21■□□□□ 0.51
MRPL55-221ENST00000430433 MYO5CQ9NQX4 1742 aa18.2■□□□□ 0.5
MRPL55-221ENST00000430433 DENND4BO75064 1496 aaPredicted RBP18.2■□□□□ 0.5
MRPL55-221ENST00000430433 ADGRL1O94910 1474 aa18.2■□□□□ 0.5
MRPL55-221ENST00000430433 FRMPD1Q5SYB0 1578 aa18.17■□□□□ 0.5
MRPL55-221ENST00000430433 EFCAB2Q5VUJ9 269 aa18.17■□□□□ 0.5
MRPL55-221ENST00000430433 ARHGAP5Q13017 1502 aa18.15■□□□□ 0.5
MRPL55-221ENST00000430433 RICTORQ6R327 1708 aa18.14■□□□□ 0.49
MRPL55-221ENST00000430433 SCAPERQ9BY12 1400 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms