RNA–Protein interactions for RNA: ENST00000430350.2

PRNP-203, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,539 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-203ENST00000430350 CTTNBP2Q8WZ74 1663 aa23.01■■□□□ 1.27
PRNP-203ENST00000430350 ZEB1P37275 1124 aaPredicted RBP23■■□□□ 1.27
PRNP-203ENST00000430350 EIF4G3O43432 1585 aaKnown RBP22.99■■□□□ 1.27
PRNP-203ENST00000430350 ADAMTS12P58397 1594 aa22.99■■□□□ 1.27
PRNP-203ENST00000430350 PELP1Q8IZL8 1130 aaKnown RBP22.98■■□□□ 1.27
PRNP-203ENST00000430350 APLP2Q06481 763 aa22.93■■□□□ 1.26
PRNP-203ENST00000430350 EFCAB5A4FU69 1503 aa22.91■■□□□ 1.26
PRNP-203ENST00000430350 SNAPC4Q5SXM2 1469 aa22.9■■□□□ 1.26
PRNP-203ENST00000430350 TTBK1Q5TCY1 1321 aaPredicted RBP22.86■■□□□ 1.25
PRNP-203ENST00000430350 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
PRNP-203ENST00000430350 P3H3Q8IVL6 736 aa22.8■■□□□ 1.24
PRNP-203ENST00000430350 FHOD3Q2V2M9 1422 aa22.79■■□□□ 1.24
PRNP-203ENST00000430350 SAMD9Q5K651 1589 aa22.79■■□□□ 1.24
PRNP-203ENST00000430350 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
PRNP-203ENST00000430350 IQGAP2Q13576 1575 aa22.78■■□□□ 1.24
PRNP-203ENST00000430350 SYNJ2O15056 1496 aa22.78■■□□□ 1.24
PRNP-203ENST00000430350 CHMP7Q8WUX9 453 aaPredicted RBP22.73■■□□□ 1.23
PRNP-203ENST00000430350 KIAA0586Q9BVV6 1533 aa22.72■■□□□ 1.23
PRNP-203ENST00000430350 FMN1Q68DA7 1419 aa22.72■■□□□ 1.23
PRNP-203ENST00000430350 MAP3K1Q13233 1512 aa22.71■■□□□ 1.23
PRNP-203ENST00000430350 PCF11O94913 1555 aaKnown RBP22.7■■□□□ 1.22
PRNP-203ENST00000430350 KANK4Q5T7N3 995 aaPredicted RBP22.68■■□□□ 1.22
PRNP-203ENST00000430350 CASKIN1Q8WXD9 1431 aa22.68■■□□□ 1.22
PRNP-203ENST00000430350 FYCO1Q9BQS8 1478 aa22.68■■□□□ 1.22
PRNP-203ENST00000430350 UGGT2Q9NYU1 1516 aa22.67■■□□□ 1.22
PRNP-203ENST00000430350 TIAM1Q13009 1591 aa22.66■■□□□ 1.22
PRNP-203ENST00000430350 FBLN2P98095 1184 aa22.65■■□□□ 1.22
PRNP-203ENST00000430350 CEP170Q5SW79 1584 aa22.63■■□□□ 1.21
PRNP-203ENST00000430350 NUP160Q12769 1436 aa22.62■■□□□ 1.21
PRNP-203ENST00000430350 CFAP43Q8NDM7 1665 aa22.6■■□□□ 1.21
PRNP-203ENST00000430350 ATP1B4Q9UN42 357 aaPredicted RBP22.59■■□□□ 1.21
PRNP-203ENST00000430350 LRRC9Q6ZRR7 1453 aa22.57■■□□□ 1.2
PRNP-203ENST00000430350 DISP1Q96F81 1524 aa22.54■■□□□ 1.2
PRNP-203ENST00000430350 KIAA0556O60303 1618 aa22.54■■□□□ 1.2
PRNP-203ENST00000430350 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
PRNP-203ENST00000430350 CHD1O14646 1710 aa22.46■■□□□ 1.19
PRNP-203ENST00000430350 RRBP1Q9P2E9 1410 aaKnown RBP22.46■■□□□ 1.19
PRNP-203ENST00000430350 LRRIQ1Q96JM4 1722 aa22.45■■□□□ 1.18
PRNP-203ENST00000430350 HECW1Q76N89 1606 aa22.45■■□□□ 1.18
PRNP-203ENST00000430350 CARMIL2Q6F5E8 1435 aa22.44■■□□□ 1.18
PRNP-203ENST00000430350 CCDC18Q5T9S5 1454 aa22.43■■□□□ 1.18
PRNP-203ENST00000430350 HNRNPUL2Q1KMD3 747 aaKnown RBP22.39■■□□□ 1.18
PRNP-203ENST00000430350 CCNB3Q8WWL7 1395 aa22.39■■□□□ 1.17
PRNP-203ENST00000430350 MTUS2Q5JR59 1369 aa22.39■■□□□ 1.17
PRNP-203ENST00000430350 PHLDB1Q86UU1 1377 aa22.37■■□□□ 1.17
PRNP-203ENST00000430350 EPRSP07814 1512 aaKnown RBP22.37■■□□□ 1.17
PRNP-203ENST00000430350 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
PRNP-203ENST00000430350 RAPGEF6Q8TEU7 1601 aa22.34■■□□□ 1.17
PRNP-203ENST00000430350 EHBP1L1Q8N3D4 1523 aa22.33■■□□□ 1.17
PRNP-203ENST00000430350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.32■■□□□ 1.16
PRNP-203ENST00000430350 PRG4Q92954 1404 aaPredicted RBP22.3■■□□□ 1.16
PRNP-203ENST00000430350 NUP153P49790 1475 aaKnown RBP22.3■■□□□ 1.16
PRNP-203ENST00000430350 CDK13Q14004 1512 aaKnown RBP22.29■■□□□ 1.16
PRNP-203ENST00000430350 MAGI3Q5TCQ9 1506 aa22.28■■□□□ 1.16
PRNP-203ENST00000430350 SHROOM2Q13796 1616 aa22.28■■□□□ 1.16
PRNP-203ENST00000430350 SUPT6HQ7KZ85 1726 aaKnown RBP22.27■■□□□ 1.16
PRNP-203ENST00000430350 CCER1Q8TC90 406 aaPredicted RBP22.27■■□□□ 1.16
PRNP-203ENST00000430350 PLB1Q6P1J6 1458 aa22.26■■□□□ 1.15
PRNP-203ENST00000430350 NCOA2Q15596 1464 aa22.26■■□□□ 1.15
PRNP-203ENST00000430350 ARID3CA6NKF2 412 aa22.22■■□□□ 1.15
PRNP-203ENST00000430350 ARHGEF11O15085 1522 aa22.21■■□□□ 1.15
PRNP-203ENST00000430350 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.21■■□□□ 1.15
PRNP-203ENST00000430350 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
PRNP-203ENST00000430350 FGD6Q6ZV73 1430 aa22.2■■□□□ 1.14
PRNP-203ENST00000430350 ABCA8O94911 1581 aa22.2■■□□□ 1.14
PRNP-203ENST00000430350 PTPRGP23470 1445 aa22.19■■□□□ 1.14
PRNP-203ENST00000430350 MYOM3Q5VTT5 1437 aa22.19■■□□□ 1.14
PRNP-203ENST00000430350 CDK11AQ9UQ88 783 aaPredicted RBP22.19■■□□□ 1.14
PRNP-203ENST00000430350 FAM50AQ14320 339 aaKnown RBP22.18■■□□□ 1.14
PRNP-203ENST00000430350 ITGAEP38570 1179 aa22.16■■□□□ 1.14
PRNP-203ENST00000430350 MYT1Q01538 1121 aa22.12■■□□□ 1.13
PRNP-203ENST00000430350 ERCC6L2Q5T890 1561 aa22.1■■□□□ 1.13
PRNP-203ENST00000430350 TROQ12816 1431 aaPredicted RBP22.1■■□□□ 1.13
PRNP-203ENST00000430350 ACIN1Q9UKV3 1341 aaKnown RBP22.07■■□□□ 1.12
PRNP-203ENST00000430350 ATP10BO94823 1461 aa22.07■■□□□ 1.12
PRNP-203ENST00000430350 UACAQ9BZF9 1416 aa22.07■■□□□ 1.12
PRNP-203ENST00000430350 PTPN23Q9H3S7 1636 aa22.06■■□□□ 1.12
PRNP-203ENST00000430350 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
PRNP-203ENST00000430350 TCOF1Q13428 1488 aaKnown RBP22.04■■□□□ 1.12
PRNP-203ENST00000430350 PLEKHD1A6NEE1 506 aa22.02■■□□□ 1.12
PRNP-203ENST00000430350 ADCY10Q96PN6 1610 aa22.02■■□□□ 1.12
PRNP-203ENST00000430350 SETD5Q9C0A6 1442 aa22■■□□□ 1.11
PRNP-203ENST00000430350 RAB3GAP2Q9H2M9 1393 aa21.98■■□□□ 1.11
PRNP-203ENST00000430350 ABCC2Q92887 1545 aa21.98■■□□□ 1.11
PRNP-203ENST00000430350 OSCARQ8IYS5 282 aa21.97■■□□□ 1.11
PRNP-203ENST00000430350 DHX57Q6P158 1386 aaKnown RBP21.96■■□□□ 1.11
PRNP-203ENST00000430350 KIF14Q15058 1648 aa21.96■■□□□ 1.11
PRNP-203ENST00000430350 PTPRKQ15262 1439 aa21.94■■□□□ 1.1
PRNP-203ENST00000430350 CLSPNQ9HAW4 1339 aa21.93■■□□□ 1.1
PRNP-203ENST00000430350 ITSN2Q9NZM3 1697 aa21.93■■□□□ 1.1
PRNP-203ENST00000430350 UHRF1BP1LA0JNW5 1464 aa21.92■■□□□ 1.1
PRNP-203ENST00000430350 GPATCH8Q9UKJ3 1502 aaKnown RBP21.91■■□□□ 1.1
PRNP-203ENST00000430350 CENPBP07199 599 aaPredicted RBP21.91■■□□□ 1.1
PRNP-203ENST00000430350 HFM1A2PYH4 1435 aa21.89■■□□□ 1.09
PRNP-203ENST00000430350 ABCC10Q5T3U5 1492 aa21.89■■□□□ 1.09
PRNP-203ENST00000430350 CFDP1Q9UEE9 299 aaPredicted RBP21.88■■□□□ 1.09
PRNP-203ENST00000430350 NEUROD1Q13562 356 aa21.85■■□□□ 1.09
PRNP-203ENST00000430350 KDM5BQ9UGL1 1544 aa21.84■■□□□ 1.09
PRNP-203ENST00000430350 ZNF644Q9H582 1327 aaPredicted RBP21.83■■□□□ 1.09
PRNP-203ENST00000430350 NAIPQ13075 1403 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms