RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 EFCAB5A4FU69 1503 aa24.44■■□□□ 1.5
MBD4-203ENST00000429544 P3H3Q8IVL6 736 aa24.44■■□□□ 1.5
MBD4-203ENST00000429544 PCF11O94913 1555 aaKnown RBP24.43■■□□□ 1.5
MBD4-203ENST00000429544 FHAD1B1AJZ9 1412 aa24.42■■□□□ 1.5
MBD4-203ENST00000429544 MAP3K1Q13233 1512 aa24.42■■□□□ 1.5
MBD4-203ENST00000429544 FHOD3Q2V2M9 1422 aa24.42■■□□□ 1.5
MBD4-203ENST00000429544 RRBP1Q9P2E9 1410 aaKnown RBP24.4■■□□□ 1.5
MBD4-203ENST00000429544 PBRM1Q86U86 1689 aa24.39■■□□□ 1.5
MBD4-203ENST00000429544 CFAP43Q8NDM7 1665 aa24.37■■□□□ 1.49
MBD4-203ENST00000429544 LRRC9Q6ZRR7 1453 aa24.33■■□□□ 1.48
MBD4-203ENST00000429544 CCNB3Q8WWL7 1395 aa24.3■■□□□ 1.48
MBD4-203ENST00000429544 FYCO1Q9BQS8 1478 aa24.3■■□□□ 1.48
MBD4-203ENST00000429544 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.489e-7■■■□□ 15.4
MBD4-203ENST00000429544 SAMD9Q5K651 1589 aa24.28■■□□□ 1.48
MBD4-203ENST00000429544 WDR62O43379 1518 aa24.28■■□□□ 1.48
MBD4-203ENST00000429544 ATP1B4Q9UN42 357 aaPredicted RBP24.28■■□□□ 1.48
MBD4-203ENST00000429544 CASKIN1Q8WXD9 1431 aa24.27■■□□□ 1.48
MBD4-203ENST00000429544 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
MBD4-203ENST00000429544 FMN1Q68DA7 1419 aa24.23■■□□□ 1.47
MBD4-203ENST00000429544 IFT140Q96RY7 1462 aa24.22■■□□□ 1.47
MBD4-203ENST00000429544 GRIN2BQ13224 1484 aa24.2■■□□□ 1.46
MBD4-203ENST00000429544 SNAPC4Q5SXM2 1469 aa24.2■■□□□ 1.46
MBD4-203ENST00000429544 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
MBD4-203ENST00000429544 PHLDB1Q86UU1 1377 aa24.19■■□□□ 1.46
MBD4-203ENST00000429544 ERCC6Q03468 1493 aa24.18■■□□□ 1.46
MBD4-203ENST00000429544 ITGAEP38570 1179 aa24.15■■□□□ 1.46
MBD4-203ENST00000429544 LRRIQ1Q96JM4 1722 aa24.13■■□□□ 1.45
MBD4-203ENST00000429544 IQGAP2Q13576 1575 aa24.13■■□□□ 1.45
MBD4-203ENST00000429544 DHX57Q6P158 1386 aaKnown RBP24.12■■□□□ 1.45
MBD4-203ENST00000429544 THOC2Q8NI27 1593 aaKnown RBP24.12■■□□□ 1.45
MBD4-203ENST00000429544 EIF4G3O43432 1585 aaKnown RBP24.09■■□□□ 1.45
MBD4-203ENST00000429544 FAM50AQ14320 339 aaKnown RBP24.04■■□□□ 1.44
MBD4-203ENST00000429544 CLSPNQ9HAW4 1339 aa24.03■■□□□ 1.44
MBD4-203ENST00000429544 MTUS2Q5JR59 1369 aa24.01■■□□□ 1.43
MBD4-203ENST00000429544 RAB3GAP2Q9H2M9 1393 aa23.98■■□□□ 1.43
MBD4-203ENST00000429544 ZNF316A6NFI3 1004 aaPredicted RBP23.98■■□□□ 1.43
MBD4-203ENST00000429544 DIEXFQ68CQ4 756 aaKnown RBP23.97■■□□□ 1.43
MBD4-203ENST00000429544 UGGT2Q9NYU1 1516 aa23.97■■□□□ 1.43
MBD4-203ENST00000429544 HECW1Q76N89 1606 aa23.96■■□□□ 1.43
MBD4-203ENST00000429544 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
MBD4-203ENST00000429544 EHBP1L1Q8N3D4 1523 aa23.94■■□□□ 1.42
MBD4-203ENST00000429544 SETD5Q9C0A6 1442 aa23.94■■□□□ 1.42
MBD4-203ENST00000429544 FGD6Q6ZV73 1430 aa23.94■■□□□ 1.42
MBD4-203ENST00000429544 SUPT6HQ7KZ85 1726 aaKnown RBP23.93■■□□□ 1.42
MBD4-203ENST00000429544 CCDC18Q5T9S5 1454 aa23.92■■□□□ 1.42
MBD4-203ENST00000429544 KIAA0586Q9BVV6 1533 aa23.92■■□□□ 1.42
MBD4-203ENST00000429544 NCOA2Q15596 1464 aa23.91■■□□□ 1.42
MBD4-203ENST00000429544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.91■■□□□ 1.42
MBD4-203ENST00000429544 MAGI1Q96QZ7 1491 aaPredicted RBP23.9■■□□□ 1.42
MBD4-203ENST00000429544 MAGI3Q5TCQ9 1506 aa23.89■■□□□ 1.42
MBD4-203ENST00000429544 KIAA0556O60303 1618 aa23.88■■□□□ 1.41
MBD4-203ENST00000429544 EPRSP07814 1512 aaKnown RBP23.85■■□□□ 1.41
MBD4-203ENST00000429544 DISP1Q96F81 1524 aa23.85■■□□□ 1.41
MBD4-203ENST00000429544 MYOM3Q5VTT5 1437 aa23.84■■□□□ 1.41
MBD4-203ENST00000429544 SYNJ2O15056 1496 aa23.84■■□□□ 1.41
MBD4-203ENST00000429544 CDK13Q14004 1512 aaKnown RBP23.83■■□□□ 1.41
MBD4-203ENST00000429544 MAPKBP1O60336 1514 aa23.83■■□□□ 1.4
MBD4-203ENST00000429544 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
MBD4-203ENST00000429544 ARHGEF11O15085 1522 aa23.81■■□□□ 1.4
MBD4-203ENST00000429544 CHMP7Q8WUX9 453 aaPredicted RBP23.8■■□□□ 1.4
MBD4-203ENST00000429544 PTPN23Q9H3S7 1636 aa23.78■■□□□ 1.4
MBD4-203ENST00000429544 ARID3CA6NKF2 412 aa23.76■■□□□ 1.39
MBD4-203ENST00000429544 FBLN2P98095 1184 aa23.75■■□□□ 1.39
MBD4-203ENST00000429544 RAPGEF6Q8TEU7 1601 aa23.74■■□□□ 1.39
MBD4-203ENST00000429544 PTPRKQ15262 1439 aa23.73■■□□□ 1.39
MBD4-203ENST00000429544 NUP160Q12769 1436 aa23.69■■□□□ 1.38
MBD4-203ENST00000429544 NUP153P49790 1475 aaKnown RBP23.69■■□□□ 1.38
MBD4-203ENST00000429544 HFM1A2PYH4 1435 aa23.67■■□□□ 1.38
MBD4-203ENST00000429544 TCOF1Q13428 1488 aaKnown RBP23.67■■□□□ 1.38
MBD4-203ENST00000429544 NAIPQ13075 1403 aa23.61■■□□□ 1.37
MBD4-203ENST00000429544 CARMIL2Q6F5E8 1435 aa23.6■■□□□ 1.37
MBD4-203ENST00000429544 MIA2Q96PC5 1412 aa23.59■■□□□ 1.37
MBD4-203ENST00000429544 JPH4Q96JJ6 628 aa23.59■■□□□ 1.37
MBD4-203ENST00000429544 SIN3AQ96ST3 1273 aa23.58■■□□□ 1.37
MBD4-203ENST00000429544 PLB1Q6P1J6 1458 aa23.58■■□□□ 1.37
MBD4-203ENST00000429544 NEUROD1Q13562 356 aa23.56■■□□□ 1.36
MBD4-203ENST00000429544 GCC2Q8IWJ2 1684 aa23.56■■□□□ 1.36
MBD4-203ENST00000429544 UACAQ9BZF9 1416 aa23.54■■□□□ 1.36
MBD4-203ENST00000429544 CDK11AQ9UQ88 783 aaPredicted RBP23.53■■□□□ 1.36
MBD4-203ENST00000429544 CHIC2Q9UKJ5 165 aa23.52■■□□□ 1.36
MBD4-203ENST00000429544 MIER1Q8N108 512 aa23.52■■□□□ 1.36
MBD4-203ENST00000429544 RRP7BPQ9NSQ0 103 aa23.51■■□□□ 1.35
MBD4-203ENST00000429544 TROQ12816 1431 aaPredicted RBP23.49■■□□□ 1.35
MBD4-203ENST00000429544 PRG4Q92954 1404 aaPredicted RBP23.49■■□□□ 1.35
MBD4-203ENST00000429544 CHD1O14646 1710 aa23.49■■□□□ 1.35
MBD4-203ENST00000429544 AKNAQ7Z591 1439 aa23.47■■□□□ 1.35
MBD4-203ENST00000429544 ABCA8O94911 1581 aa23.46■■□□□ 1.35
MBD4-203ENST00000429544 ADCY10Q96PN6 1610 aa23.45■■□□□ 1.34
MBD4-203ENST00000429544 KDM6BO15054 1643 aa23.45■■□□□ 1.34
MBD4-203ENST00000429544 KIF14Q15058 1648 aa23.45■■□□□ 1.34
MBD4-203ENST00000429544 DNMT1P26358 1616 aaKnown RBP23.44■■□□□ 1.34
MBD4-203ENST00000429544 ITSN2Q9NZM3 1697 aa23.43■■□□□ 1.34
MBD4-203ENST00000429544 DAPK1P53355 1430 aa23.43■■□□□ 1.34
MBD4-203ENST00000429544 TIMELESSQ9UNS1 1208 aa23.42■■□□□ 1.34
MBD4-203ENST00000429544 ZNF644Q9H582 1327 aaPredicted RBP23.41■■□□□ 1.34
MBD4-203ENST00000429544 ACIN1Q9UKV3 1341 aaKnown RBP23.39■■□□□ 1.34
MBD4-203ENST00000429544 CENPBP07199 599 aaPredicted RBP23.39■■□□□ 1.33
MBD4-203ENST00000429544 ABCC5O15440 1437 aa23.39■■□□□ 1.33
MBD4-203ENST00000429544 SCAF1Q9H7N4 1312 aaKnown RBP23.37■■□□□ 1.33
MBD4-203ENST00000429544 CAMSAP2Q08AD1 1489 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms