RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
PABPC1P11-201ENST00000428966 RAPGEF2Q9Y4G8 1499 aa19.33■□□□□ 0.69
PABPC1P11-201ENST00000428966 PRXQ9BXM0 1461 aa19.3■□□□□ 0.68
PABPC1P11-201ENST00000428966 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
PABPC1P11-201ENST00000428966 ARAP1Q96P48 1450 aa19.29■□□□□ 0.68
PABPC1P11-201ENST00000428966 KIAA0586Q9BVV6 1533 aa19.29■□□□□ 0.68
PABPC1P11-201ENST00000428966 FAM9AQ8IZU1 332 aaPredicted RBP19.29■□□□□ 0.68
PABPC1P11-201ENST00000428966 JPH4Q96JJ6 628 aa19.29■□□□□ 0.68
PABPC1P11-201ENST00000428966 EEA1Q15075 1411 aa19.28■□□□□ 0.68
PABPC1P11-201ENST00000428966 CYB5RLQ6IPT4 315 aa19.28■□□□□ 0.68
PABPC1P11-201ENST00000428966 SHROOM2Q13796 1616 aa19.28■□□□□ 0.68
PABPC1P11-201ENST00000428966 ERCC6L2Q5T890 1561 aa19.27■□□□□ 0.68
PABPC1P11-201ENST00000428966 PRG4Q92954 1404 aaPredicted RBP19.24■□□□□ 0.67
PABPC1P11-201ENST00000428966 IQGAP2Q13576 1575 aa19.17■□□□□ 0.66
PABPC1P11-201ENST00000428966 DISP1Q96F81 1524 aa19.08■□□□□ 0.65
PABPC1P11-201ENST00000428966 UGGT2Q9NYU1 1516 aa19.08■□□□□ 0.65
PABPC1P11-201ENST00000428966 KIF21BO75037 1637 aa19.08■□□□□ 0.64
PABPC1P11-201ENST00000428966 CTTNBP2Q8WZ74 1663 aa19.08■□□□□ 0.64
PABPC1P11-201ENST00000428966 CARMIL2Q6F5E8 1435 aa19.06■□□□□ 0.64
PABPC1P11-201ENST00000428966 EHMT2Q96KQ7 1210 aa19.06■□□□□ 0.64
PABPC1P11-201ENST00000428966 TNIKQ9UKE5 1360 aa19.02■□□□□ 0.63
PABPC1P11-201ENST00000428966 PTPRGP23470 1445 aa19.01■□□□□ 0.63
PABPC1P11-201ENST00000428966 TTBK1Q5TCY1 1321 aaPredicted RBP19.01■□□□□ 0.63
PABPC1P11-201ENST00000428966 KIAA0556O60303 1618 aa19■□□□□ 0.63
PABPC1P11-201ENST00000428966 GOLGA3Q08378 1498 aa18.99■□□□□ 0.63
PABPC1P11-201ENST00000428966 UBTFP17480 764 aaKnown RBP18.96■□□□□ 0.63
PABPC1P11-201ENST00000428966 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
PABPC1P11-201ENST00000428966 P3H3Q8IVL6 736 aa18.92■□□□□ 0.62
PABPC1P11-201ENST00000428966 ADCY10Q96PN6 1610 aa18.92■□□□□ 0.62
PABPC1P11-201ENST00000428966 SAMD9Q5K651 1589 aa18.89■□□□□ 0.61
PABPC1P11-201ENST00000428966 UACAQ9BZF9 1416 aa18.87■□□□□ 0.61
PABPC1P11-201ENST00000428966 PLB1Q6P1J6 1458 aa18.85■□□□□ 0.61
PABPC1P11-201ENST00000428966 UHRF1BP1LA0JNW5 1464 aa18.84■□□□□ 0.61
PABPC1P11-201ENST00000428966 TRHP20396 242 aaPredicted RBP18.84■□□□□ 0.61
PABPC1P11-201ENST00000428966 NPM1P06748 294 aaKnown RBP eCLIP18.83■□□□□ 0.61
PABPC1P11-201ENST00000428966 ABCC2Q92887 1545 aa18.83■□□□□ 0.6
PABPC1P11-201ENST00000428966 FHOD3Q2V2M9 1422 aa18.83■□□□□ 0.6
PABPC1P11-201ENST00000428966 EFCAB5A4FU69 1503 aa18.8■□□□□ 0.6
PABPC1P11-201ENST00000428966 ABCA8O94911 1581 aa18.79■□□□□ 0.6
PABPC1P11-201ENST00000428966 MAPKBP1O60336 1514 aa18.78■□□□□ 0.6
PABPC1P11-201ENST00000428966 ARHGAP35Q9NRY4 1499 aa18.78■□□□□ 0.6
PABPC1P11-201ENST00000428966 KDM5BQ9UGL1 1544 aa18.77■□□□□ 0.6
PABPC1P11-201ENST00000428966 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
PABPC1P11-201ENST00000428966 ASXL2Q76L83 1435 aa18.71■□□□□ 0.59
PABPC1P11-201ENST00000428966 ARID3CA6NKF2 412 aa18.71■□□□□ 0.59
PABPC1P11-201ENST00000428966 ZCCHC11Q5TAX3 1644 aaKnown RBP18.7■□□□□ 0.58
PABPC1P11-201ENST00000428966 ABCC10Q5T3U5 1492 aa18.7■□□□□ 0.58
PABPC1P11-201ENST00000428966 RAPGEF6Q8TEU7 1601 aa18.68■□□□□ 0.58
PABPC1P11-201ENST00000428966 CLIP1P30622 1438 aa18.68■□□□□ 0.58
PABPC1P11-201ENST00000428966 NUP153P49790 1475 aaKnown RBP18.67■□□□□ 0.58
PABPC1P11-201ENST00000428966 FAM69CQ0P6D2 419 aa18.67■□□□□ 0.58
PABPC1P11-201ENST00000428966 ATP10BO94823 1461 aa18.66■□□□□ 0.58
PABPC1P11-201ENST00000428966 DIP2BQ9P265 1576 aa18.66■□□□□ 0.58
PABPC1P11-201ENST00000428966 FMN1Q68DA7 1419 aa18.65■□□□□ 0.58
PABPC1P11-201ENST00000428966 KIF13AQ9H1H9 1805 aa18.63■□□□□ 0.57
PABPC1P11-201ENST00000428966 CEP162Q5TB80 1403 aa18.62■□□□□ 0.57
PABPC1P11-201ENST00000428966 WDR7Q9Y4E6 1490 aa18.61■□□□□ 0.57
PABPC1P11-201ENST00000428966 EPRSP07814 1512 aaKnown RBP18.59■□□□□ 0.57
PABPC1P11-201ENST00000428966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
PABPC1P11-201ENST00000428966 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
PABPC1P11-201ENST00000428966 ATP1B4Q9UN42 357 aaPredicted RBP18.56■□□□□ 0.56
PABPC1P11-201ENST00000428966 KCNH8Q96L42 1107 aa18.56■□□□□ 0.56
PABPC1P11-201ENST00000428966 CDK13Q14004 1512 aaKnown RBP18.55■□□□□ 0.56
PABPC1P11-201ENST00000428966 GLI2P10070 1586 aa18.54■□□□□ 0.56
PABPC1P11-201ENST00000428966 HECW1Q76N89 1606 aa18.53■□□□□ 0.56
PABPC1P11-201ENST00000428966 CASKIN1Q8WXD9 1431 aa18.52■□□□□ 0.55
PABPC1P11-201ENST00000428966 PCF11O94913 1555 aaKnown RBP18.51■□□□□ 0.55
PABPC1P11-201ENST00000428966 PLEKHD1A6NEE1 506 aa18.49■□□□□ 0.55
PABPC1P11-201ENST00000428966 FYCO1Q9BQS8 1478 aa18.47■□□□□ 0.55
PABPC1P11-201ENST00000428966 MAP3K4Q9Y6R4 1608 aa18.47■□□□□ 0.55
PABPC1P11-201ENST00000428966 TSPOAP1O95153 1857 aa18.44■□□□□ 0.54
PABPC1P11-201ENST00000428966 LRRIQ1Q96JM4 1722 aa18.44■□□□□ 0.54
PABPC1P11-201ENST00000428966 FOXD1Q16676 465 aa18.44■□□□□ 0.54
PABPC1P11-201ENST00000428966 CD109Q6YHK3 1445 aa18.44■□□□□ 0.54
PABPC1P11-201ENST00000428966 PPRC1Q5VV67 1664 aaKnown RBP18.43■□□□□ 0.54
PABPC1P11-201ENST00000428966 CCDC18Q5T9S5 1454 aa18.41■□□□□ 0.54
PABPC1P11-201ENST00000428966 CDK11AQ9UQ88 783 aaPredicted RBP18.41■□□□□ 0.54
PABPC1P11-201ENST00000428966 ABCA9Q8IUA7 1624 aa18.4■□□□□ 0.54
PABPC1P11-201ENST00000428966 CFAP43Q8NDM7 1665 aa18.39■□□□□ 0.54
PABPC1P11-201ENST00000428966 MAGI3Q5TCQ9 1506 aa18.39■□□□□ 0.53
PABPC1P11-201ENST00000428966 TROQ12816 1431 aaPredicted RBP18.38■□□□□ 0.53
PABPC1P11-201ENST00000428966 VPS8Q8N3P4 1428 aa18.38■□□□□ 0.53
PABPC1P11-201ENST00000428966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.37■□□□□ 0.53
PABPC1P11-201ENST00000428966 TEX14Q8IWB6 1497 aa18.37■□□□□ 0.53
PABPC1P11-201ENST00000428966 COL17A1Q9UMD9 1497 aaPredicted RBP18.34■□□□□ 0.53
PABPC1P11-201ENST00000428966 TTC37Q6PGP7 1564 aa18.34■□□□□ 0.53
PABPC1P11-201ENST00000428966 KIF14Q15058 1648 aa18.33■□□□□ 0.52
PABPC1P11-201ENST00000428966 KDM6BO15054 1643 aa18.32■□□□□ 0.52
PABPC1P11-201ENST00000428966 PLCH2O75038 1416 aa18.26■□□□□ 0.51
PABPC1P11-201ENST00000428966 MTUS2Q5JR59 1369 aa18.26■□□□□ 0.51
PABPC1P11-201ENST00000428966 FANCAO15360 1455 aa18.25■□□□□ 0.51
PABPC1P11-201ENST00000428966 NEO1Q92859 1461 aa18.25■□□□□ 0.51
PABPC1P11-201ENST00000428966 TIAM1Q13009 1591 aa18.23■□□□□ 0.51
PABPC1P11-201ENST00000428966 ARAP3Q8WWN8 1544 aa18.22■□□□□ 0.51
PABPC1P11-201ENST00000428966 PHLDB1Q86UU1 1377 aa18.22■□□□□ 0.51
PABPC1P11-201ENST00000428966 AKNAQ7Z591 1439 aa18.21■□□□□ 0.51
PABPC1P11-201ENST00000428966 EHBP1L1Q8N3D4 1523 aa18.2■□□□□ 0.5
PABPC1P11-201ENST00000428966 RAPGEF3O95398 923 aa18.2■□□□□ 0.5
PABPC1P11-201ENST00000428966 ADRA2BP18089 450 aa18.19■□□□□ 0.5
PABPC1P11-201ENST00000428966 KANK4Q5T7N3 995 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms