RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 TNIKQ9UKE5 1360 aa15.27■□□□□ 0.03
HMGCLL1-206ENST00000428842 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
HMGCLL1-206ENST00000428842 SYNJ2O15056 1496 aa15.25■□□□□ 0.03
HMGCLL1-206ENST00000428842 MAGI1Q96QZ7 1491 aaPredicted RBP15.24■□□□□ 0.03
HMGCLL1-206ENST00000428842 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
HMGCLL1-206ENST00000428842 CLIP1P30622 1438 aa15.22■□□□□ 0.03
HMGCLL1-206ENST00000428842 ARID3CA6NKF2 412 aa15.21■□□□□ 0.02
HMGCLL1-206ENST00000428842 CTTNBP2Q8WZ74 1663 aa15.17■□□□□ 0.02
HMGCLL1-206ENST00000428842 FHOD3Q2V2M9 1422 aa15.17■□□□□ 0.02
HMGCLL1-206ENST00000428842 ARAP1Q96P48 1450 aa15.17■□□□□ 0.02
HMGCLL1-206ENST00000428842 ATP1B4Q9UN42 357 aaPredicted RBP15.16■□□□□ 0.02
HMGCLL1-206ENST00000428842 ARHGAP35Q9NRY4 1499 aa15.16■□□□□ 0.02
HMGCLL1-206ENST00000428842 JPH4Q96JJ6 628 aa15.13■□□□□ 0.01
HMGCLL1-206ENST00000428842 ERCC6L2Q5T890 1561 aa15.12■□□□□ 0.01
HMGCLL1-206ENST00000428842 IQGAP2Q13576 1575 aa15.11■□□□□ 0.01
HMGCLL1-206ENST00000428842 NUP160Q12769 1436 aa15.11■□□□□ 0.01
HMGCLL1-206ENST00000428842 KIAA0586Q9BVV6 1533 aa15.08■□□□□ 0
HMGCLL1-206ENST00000428842 OSCARQ8IYS5 282 aa15.06■□□□□ 0
HMGCLL1-206ENST00000428842 DISP1Q96F81 1524 aa15.05■□□□□ -0
HMGCLL1-206ENST00000428842 PRG4Q92954 1404 aaPredicted RBP15.04■□□□□ -0
HMGCLL1-206ENST00000428842 KANK4Q5T7N3 995 aaPredicted RBP14.99□□□□□ -0.01
HMGCLL1-206ENST00000428842 SAMD9Q5K651 1589 aa14.99□□□□□ -0.01
HMGCLL1-206ENST00000428842 CLASP1Q7Z460 1538 aa14.98□□□□□ -0.01
HMGCLL1-206ENST00000428842 VPS8Q8N3P4 1428 aa14.98□□□□□ -0.01
HMGCLL1-206ENST00000428842 KIAA0556O60303 1618 aa14.97□□□□□ -0.01
HMGCLL1-206ENST00000428842 UGGT2Q9NYU1 1516 aa14.97□□□□□ -0.01
HMGCLL1-206ENST00000428842 PLB1Q6P1J6 1458 aa14.96□□□□□ -0.01
HMGCLL1-206ENST00000428842 PCF11O94913 1555 aaKnown RBP14.96□□□□□ -0.02
HMGCLL1-206ENST00000428842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
HMGCLL1-206ENST00000428842 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
HMGCLL1-206ENST00000428842 LRRIQ1Q96JM4 1722 aa14.92□□□□□ -0.02
HMGCLL1-206ENST00000428842 EFCAB5A4FU69 1503 aa14.91□□□□□ -0.02
HMGCLL1-206ENST00000428842 SHROOM2Q13796 1616 aa14.9□□□□□ -0.02
HMGCLL1-206ENST00000428842 CDK13Q14004 1512 aaKnown RBP14.89□□□□□ -0.03
HMGCLL1-206ENST00000428842 CARMIL2Q6F5E8 1435 aa14.88□□□□□ -0.03
HMGCLL1-206ENST00000428842 CYB5RLQ6IPT4 315 aa14.88□□□□□ -0.03
HMGCLL1-206ENST00000428842 PTPRGP23470 1445 aa14.88□□□□□ -0.03
HMGCLL1-206ENST00000428842 APLP2Q06481 763 aa14.86□□□□□ -0.03
HMGCLL1-206ENST00000428842 FMN1Q68DA7 1419 aa14.84□□□□□ -0.03
HMGCLL1-206ENST00000428842 PCGF6Q9BYE7 350 aa14.84□□□□□ -0.03
HMGCLL1-206ENST00000428842 NUP153P49790 1475 aaKnown RBP14.83□□□□□ -0.04
HMGCLL1-206ENST00000428842 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
HMGCLL1-206ENST00000428842 CASKIN1Q8WXD9 1431 aa14.81□□□□□ -0.04
HMGCLL1-206ENST00000428842 MAGI3Q5TCQ9 1506 aa14.8□□□□□ -0.04
HMGCLL1-206ENST00000428842 RAPGEF6Q8TEU7 1601 aa14.79□□□□□ -0.04
HMGCLL1-206ENST00000428842 RIMBP3CA6NJZ7 1639 aa14.78□□□□□ -0.04
HMGCLL1-206ENST00000428842 RIMBP3BA6NNM3 1639 aa14.78□□□□□ -0.04
HMGCLL1-206ENST00000428842 RIMBP3Q9UFD9 1639 aa14.78□□□□□ -0.04
HMGCLL1-206ENST00000428842 FYCO1Q9BQS8 1478 aa14.78□□□□□ -0.04
HMGCLL1-206ENST00000428842 EPRSP07814 1512 aaKnown RBP14.77□□□□□ -0.04
HMGCLL1-206ENST00000428842 TIAM1Q13009 1591 aa14.77□□□□□ -0.05
HMGCLL1-206ENST00000428842 KCNH8Q96L42 1107 aa14.76□□□□□ -0.05
HMGCLL1-206ENST00000428842 ABCA8O94911 1581 aa14.74□□□□□ -0.05
HMGCLL1-206ENST00000428842 UACAQ9BZF9 1416 aa14.74□□□□□ -0.05
HMGCLL1-206ENST00000428842 ATP10BO94823 1461 aa14.74□□□□□ -0.05
HMGCLL1-206ENST00000428842 ADCY10Q96PN6 1610 aa14.73□□□□□ -0.05
HMGCLL1-206ENST00000428842 ITGAEP38570 1179 aa14.73□□□□□ -0.05
HMGCLL1-206ENST00000428842 MTUS2Q5JR59 1369 aa14.72□□□□□ -0.05
HMGCLL1-206ENST00000428842 LRRC9Q6ZRR7 1453 aa14.72□□□□□ -0.05
HMGCLL1-206ENST00000428842 HECW1Q76N89 1606 aa14.72□□□□□ -0.05
HMGCLL1-206ENST00000428842 PHLDB1Q86UU1 1377 aa14.7□□□□□ -0.06
HMGCLL1-206ENST00000428842 CFAP43Q8NDM7 1665 aa14.69□□□□□ -0.06
HMGCLL1-206ENST00000428842 ABCC2Q92887 1545 aa14.67□□□□□ -0.06
HMGCLL1-206ENST00000428842 KIF14Q15058 1648 aa14.67□□□□□ -0.06
HMGCLL1-206ENST00000428842 ZCCHC11Q5TAX3 1644 aaKnown RBP14.65□□□□□ -0.06
HMGCLL1-206ENST00000428842 ZNF644Q9H582 1327 aaPredicted RBP14.65□□□□□ -0.06
HMGCLL1-206ENST00000428842 PLEKHD1A6NEE1 506 aa14.64□□□□□ -0.07
HMGCLL1-206ENST00000428842 TRIM26Q12899 539 aaPredicted RBP14.64□□□□□ -0.07
HMGCLL1-206ENST00000428842 FAM50AQ14320 339 aaKnown RBP14.63□□□□□ -0.07
HMGCLL1-206ENST00000428842 ZNF777Q9ULD5 760 aaPredicted RBP14.63□□□□□ -0.07
HMGCLL1-206ENST00000428842 NCOA2Q15596 1464 aa14.62□□□□□ -0.07
HMGCLL1-206ENST00000428842 CCDC18Q5T9S5 1454 aa14.61□□□□□ -0.07
HMGCLL1-206ENST00000428842 DNAJC5Q9H3Z4 198 aa14.58□□□□□ -0.07
HMGCLL1-206ENST00000428842 KDM5BQ9UGL1 1544 aa14.58□□□□□ -0.08
HMGCLL1-206ENST00000428842 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
HMGCLL1-206ENST00000428842 ASXL2Q76L83 1435 aa14.57□□□□□ -0.08
HMGCLL1-206ENST00000428842 CDK11AQ9UQ88 783 aaPredicted RBP14.57□□□□□ -0.08
HMGCLL1-206ENST00000428842 TROQ12816 1431 aaPredicted RBP14.56□□□□□ -0.08
HMGCLL1-206ENST00000428842 MAP3K1Q13233 1512 aa14.56□□□□□ -0.08
HMGCLL1-206ENST00000428842 EHBP1L1Q8N3D4 1523 aa14.55□□□□□ -0.08
HMGCLL1-206ENST00000428842 TTC37Q6PGP7 1564 aa14.54□□□□□ -0.08
HMGCLL1-206ENST00000428842 UHRF1BP1LA0JNW5 1464 aa14.54□□□□□ -0.08
HMGCLL1-206ENST00000428842 SUPT6HQ7KZ85 1726 aaKnown RBP14.54□□□□□ -0.08
HMGCLL1-206ENST00000428842 CHIC2Q9UKJ5 165 aa14.54□□□□□ -0.08
HMGCLL1-206ENST00000428842 CCNB3Q8WWL7 1395 aa14.52□□□□□ -0.09
HMGCLL1-206ENST00000428842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.51□□□□□ -0.09
HMGCLL1-206ENST00000428842 CFDP1Q9UEE9 299 aaPredicted RBP14.51□□□□□ -0.09
HMGCLL1-206ENST00000428842 MYOM3Q5VTT5 1437 aa14.49□□□□□ -0.09
HMGCLL1-206ENST00000428842 FGD6Q6ZV73 1430 aa14.49□□□□□ -0.09
HMGCLL1-206ENST00000428842 WDR7Q9Y4E6 1490 aa14.49□□□□□ -0.09
HMGCLL1-206ENST00000428842 GPATCH8Q9UKJ3 1502 aaKnown RBP14.49□□□□□ -0.09
HMGCLL1-206ENST00000428842 HNRNPMP52272 730 aaKnown RBP eCLIP14.49□□□□□ -0.09
HMGCLL1-206ENST00000428842 CDC42BPAQ5VT25 1732 aa14.48□□□□□ -0.09
HMGCLL1-206ENST00000428842 ABCC10Q5T3U5 1492 aa14.48□□□□□ -0.09
HMGCLL1-206ENST00000428842 FAM69CQ0P6D2 419 aa14.47□□□□□ -0.09
HMGCLL1-206ENST00000428842 PTPRKQ15262 1439 aa14.47□□□□□ -0.09
HMGCLL1-206ENST00000428842 RRBP1Q9P2E9 1410 aaKnown RBP14.45□□□□□ -0.1
HMGCLL1-206ENST00000428842 TSPOAP1O95153 1857 aa14.45□□□□□ -0.1
HMGCLL1-206ENST00000428842 CDC42BPBQ9Y5S2 1711 aa14.44□□□□□ -0.1
HMGCLL1-206ENST00000428842 PTPN23Q9H3S7 1636 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms