RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 CEP162Q5TB80 1403 aa17.56■□□□□ 0.4
CRIM1-204ENST00000428774 UBTFP17480 764 aaKnown RBP17.56■□□□□ 0.4
CRIM1-204ENST00000428774 CLASP1Q7Z460 1538 aa17.53■□□□□ 0.4
CRIM1-204ENST00000428774 IQGAP2Q13576 1575 aa17.5■□□□□ 0.39
CRIM1-204ENST00000428774 NUP160Q12769 1436 aa17.5■□□□□ 0.39
CRIM1-204ENST00000428774 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
CRIM1-204ENST00000428774 CLIP1P30622 1438 aa17.47■□□□□ 0.39
CRIM1-204ENST00000428774 SAMD9Q5K651 1589 aa17.45■□□□□ 0.38
CRIM1-204ENST00000428774 EFCAB5A4FU69 1503 aa17.43■□□□□ 0.38
CRIM1-204ENST00000428774 ARHGAP35Q9NRY4 1499 aa17.43■□□□□ 0.38
CRIM1-204ENST00000428774 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
CRIM1-204ENST00000428774 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
CRIM1-204ENST00000428774 SHROOM2Q13796 1616 aa17.4■□□□□ 0.38
CRIM1-204ENST00000428774 UGGT2Q9NYU1 1516 aa17.4■□□□□ 0.38
CRIM1-204ENST00000428774 ERCC6L2Q5T890 1561 aa17.39■□□□□ 0.37
CRIM1-204ENST00000428774 RIMBP3CA6NJZ7 1639 aa17.37■□□□□ 0.37
CRIM1-204ENST00000428774 RIMBP3BA6NNM3 1639 aa17.37■□□□□ 0.37
CRIM1-204ENST00000428774 RIMBP3Q9UFD9 1639 aa17.37■□□□□ 0.37
CRIM1-204ENST00000428774 KIAA0556O60303 1618 aa17.36■□□□□ 0.37
CRIM1-204ENST00000428774 RANGAP1P46060 587 aaPredicted RBP17.36■□□□□ 0.37
CRIM1-204ENST00000428774 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
CRIM1-204ENST00000428774 ARHGEF11O15085 1522 aa17.33■□□□□ 0.37
CRIM1-204ENST00000428774 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
CRIM1-204ENST00000428774 FHOD3Q2V2M9 1422 aa17.3■□□□□ 0.36
CRIM1-204ENST00000428774 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
CRIM1-204ENST00000428774 PCF11O94913 1555 aaKnown RBP17.28■□□□□ 0.36
CRIM1-204ENST00000428774 PRG4Q92954 1404 aaPredicted RBP17.28■□□□□ 0.36
CRIM1-204ENST00000428774 JPH4Q96JJ6 628 aa17.27■□□□□ 0.36
CRIM1-204ENST00000428774 P3H3Q8IVL6 736 aa17.21■□□□□ 0.35
CRIM1-204ENST00000428774 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
CRIM1-204ENST00000428774 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
CRIM1-204ENST00000428774 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
CRIM1-204ENST00000428774 FMN1Q68DA7 1419 aa17.17■□□□□ 0.34
CRIM1-204ENST00000428774 FYCO1Q9BQS8 1478 aa17.17■□□□□ 0.34
CRIM1-204ENST00000428774 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
CRIM1-204ENST00000428774 RAPGEF6Q8TEU7 1601 aa17.15■□□□□ 0.34
CRIM1-204ENST00000428774 TTBK1Q5TCY1 1321 aaPredicted RBP17.14■□□□□ 0.33
CRIM1-204ENST00000428774 CASKIN1Q8WXD9 1431 aa17.13■□□□□ 0.33
CRIM1-204ENST00000428774 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
CRIM1-204ENST00000428774 ABCA8O94911 1581 aa17.11■□□□□ 0.33
CRIM1-204ENST00000428774 CYB5RLQ6IPT4 315 aa17.1■□□□□ 0.33
CRIM1-204ENST00000428774 ADCY10Q96PN6 1610 aa17.07■□□□□ 0.32
CRIM1-204ENST00000428774 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
CRIM1-204ENST00000428774 PLB1Q6P1J6 1458 aa17.06■□□□□ 0.32
CRIM1-204ENST00000428774 PTPRGP23470 1445 aa17.05■□□□□ 0.32
CRIM1-204ENST00000428774 NUP153P49790 1475 aaKnown RBP17.05■□□□□ 0.32
CRIM1-204ENST00000428774 CDK13Q14004 1512 aaKnown RBP17.02■□□□□ 0.32
CRIM1-204ENST00000428774 CCDC18Q5T9S5 1454 aa17.02■□□□□ 0.32
CRIM1-204ENST00000428774 EPRSP07814 1512 aaKnown RBP17.01■□□□□ 0.31
CRIM1-204ENST00000428774 ABCC2Q92887 1545 aa17■□□□□ 0.31
CRIM1-204ENST00000428774 MAGI3Q5TCQ9 1506 aa16.98■□□□□ 0.31
CRIM1-204ENST00000428774 UACAQ9BZF9 1416 aa16.96■□□□□ 0.31
CRIM1-204ENST00000428774 EHBP1L1Q8N3D4 1523 aa16.96■□□□□ 0.31
CRIM1-204ENST00000428774 LRRC9Q6ZRR7 1453 aa16.96■□□□□ 0.31
CRIM1-204ENST00000428774 PPARGC1BQ86YN6 1023 aaKnown RBP16.95■□□□□ 0.3
CRIM1-204ENST00000428774 ZCCHC11Q5TAX3 1644 aaKnown RBP16.95■□□□□ 0.3
CRIM1-204ENST00000428774 UHRF1BP1LA0JNW5 1464 aa16.94■□□□□ 0.3
CRIM1-204ENST00000428774 APLP2Q06481 763 aa16.94■□□□□ 0.3
CRIM1-204ENST00000428774 ATP1B4Q9UN42 357 aaPredicted RBP16.94■□□□□ 0.3
CRIM1-204ENST00000428774 KANK4Q5T7N3 995 aaPredicted RBP16.92■□□□□ 0.3
CRIM1-204ENST00000428774 ARID3CA6NKF2 412 aa16.91■□□□□ 0.3
CRIM1-204ENST00000428774 SUPT6HQ7KZ85 1726 aaKnown RBP16.9■□□□□ 0.3
CRIM1-204ENST00000428774 ATP10BO94823 1461 aa16.89■□□□□ 0.29
CRIM1-204ENST00000428774 KDM5BQ9UGL1 1544 aa16.88■□□□□ 0.29
CRIM1-204ENST00000428774 KIF14Q15058 1648 aa16.85■□□□□ 0.29
CRIM1-204ENST00000428774 MTUS2Q5JR59 1369 aa16.85■□□□□ 0.29
CRIM1-204ENST00000428774 TROQ12816 1431 aaPredicted RBP16.82■□□□□ 0.28
CRIM1-204ENST00000428774 MAPKBP1O60336 1514 aa16.81■□□□□ 0.28
CRIM1-204ENST00000428774 NCOA2Q15596 1464 aa16.81■□□□□ 0.28
CRIM1-204ENST00000428774 KIF13AQ9H1H9 1805 aa16.81■□□□□ 0.28
CRIM1-204ENST00000428774 ASXL2Q76L83 1435 aa16.79■□□□□ 0.28
CRIM1-204ENST00000428774 PHLDB1Q86UU1 1377 aa16.77■□□□□ 0.28
CRIM1-204ENST00000428774 NPM1P06748 294 aaKnown RBP eCLIP16.77■□□□□ 0.28
CRIM1-204ENST00000428774 ITSN2Q9NZM3 1697 aa16.77■□□□□ 0.28
CRIM1-204ENST00000428774 DIP2BQ9P265 1576 aa16.77■□□□□ 0.27
CRIM1-204ENST00000428774 CDC42BPAQ5VT25 1732 aa16.76■□□□□ 0.27
CRIM1-204ENST00000428774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
CRIM1-204ENST00000428774 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
CRIM1-204ENST00000428774 TTC37Q6PGP7 1564 aa16.74■□□□□ 0.27
CRIM1-204ENST00000428774 RRBP1Q9P2E9 1410 aaKnown RBP16.74■□□□□ 0.27
CRIM1-204ENST00000428774 ABCC10Q5T3U5 1492 aa16.73■□□□□ 0.27
CRIM1-204ENST00000428774 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
CRIM1-204ENST00000428774 TRIM26Q12899 539 aaPredicted RBP16.73■□□□□ 0.27
CRIM1-204ENST00000428774 MYOM3Q5VTT5 1437 aa16.72■□□□□ 0.27
CRIM1-204ENST00000428774 CDK11AQ9UQ88 783 aaPredicted RBP16.72■□□□□ 0.27
CRIM1-204ENST00000428774 PREX2Q70Z35 1606 aa16.71■□□□□ 0.27
CRIM1-204ENST00000428774 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.7■□□□□ 0.26
CRIM1-204ENST00000428774 MYO5CQ9NQX4 1742 aa16.7■□□□□ 0.26
CRIM1-204ENST00000428774 PTPN23Q9H3S7 1636 aa16.7■□□□□ 0.26
CRIM1-204ENST00000428774 TSPOAP1O95153 1857 aa16.69■□□□□ 0.26
CRIM1-204ENST00000428774 FGD6Q6ZV73 1430 aa16.69■□□□□ 0.26
CRIM1-204ENST00000428774 CDC42BPBQ9Y5S2 1711 aa16.68■□□□□ 0.26
CRIM1-204ENST00000428774 PLEKHD1A6NEE1 506 aa16.67■□□□□ 0.26
CRIM1-204ENST00000428774 ABCA9Q8IUA7 1624 aa16.67■□□□□ 0.26
CRIM1-204ENST00000428774 KCNH8Q96L42 1107 aa16.66■□□□□ 0.26
CRIM1-204ENST00000428774 MAP3K4Q9Y6R4 1608 aa16.66■□□□□ 0.26
CRIM1-204ENST00000428774 PPRC1Q5VV67 1664 aaKnown RBP16.65■□□□□ 0.26
CRIM1-204ENST00000428774 CCNB3Q8WWL7 1395 aa16.65■□□□□ 0.26
CRIM1-204ENST00000428774 GLI2P10070 1586 aa16.65■□□□□ 0.26
CRIM1-204ENST00000428774 TRHP20396 242 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms