RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 CARMIL2Q6F5E8 1435 aa11.27□□□□□ -0.6
CNOT4-206ENST00000428680 KIF27Q86VH2 1401 aa11.27□□□□□ -0.6
CNOT4-206ENST00000428680 SHROOM2Q13796 1616 aa11.27□□□□□ -0.61
CNOT4-206ENST00000428680 RAD54L2Q9Y4B4 1467 aa11.24□□□□□ -0.61
CNOT4-206ENST00000428680 TDRD9Q8NDG6 1382 aaKnown RBP11.24□□□□□ -0.61
CNOT4-206ENST00000428680 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
CNOT4-206ENST00000428680 KIAA0586Q9BVV6 1533 aa11.2□□□□□ -0.62
CNOT4-206ENST00000428680 CYB5RLQ6IPT4 315 aa11.2□□□□□ -0.62
CNOT4-206ENST00000428680 MAPKBP1O60336 1514 aa11.19□□□□□ -0.62
CNOT4-206ENST00000428680 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
CNOT4-206ENST00000428680 CEP170Q5SW79 1584 aa11.18□□□□□ -0.62
CNOT4-206ENST00000428680 UBTFP17480 764 aaKnown RBP11.17□□□□□ -0.62
CNOT4-206ENST00000428680 AEBP2Q6ZN18 517 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-206ENST00000428680 PLB1Q6P1J6 1458 aa11.15□□□□□ -0.63
CNOT4-206ENST00000428680 TEX14Q8IWB6 1497 aa11.14□□□□□ -0.63
CNOT4-206ENST00000428680 UHRF1BP1LA0JNW5 1464 aa11.14□□□□□ -0.63
CNOT4-206ENST00000428680 PHLDB1Q86UU1 1377 aa11.13□□□□□ -0.63
CNOT4-206ENST00000428680 RUSC2Q8N2Y8 1516 aa11.11□□□□□ -0.63
CNOT4-206ENST00000428680 EEA1Q15075 1411 aa11.11□□□□□ -0.63
CNOT4-206ENST00000428680 TNIKQ9UKE5 1360 aa11.1□□□□□ -0.63
CNOT4-206ENST00000428680 PRG4Q92954 1404 aaPredicted RBP11.1□□□□□ -0.63
CNOT4-206ENST00000428680 GLI2P10070 1586 aa11.1□□□□□ -0.63
CNOT4-206ENST00000428680 CHIC1Q5VXU3 224 aa11.09□□□□□ -0.63
CNOT4-206ENST00000428680 ABCC10Q5T3U5 1492 aa11.07□□□□□ -0.64
CNOT4-206ENST00000428680 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
CNOT4-206ENST00000428680 IQGAP2Q13576 1575 aa11.05□□□□□ -0.64
CNOT4-206ENST00000428680 PTPRGP23470 1445 aa11.03□□□□□ -0.64
CNOT4-206ENST00000428680 RAPGEF2Q9Y4G8 1499 aa11.03□□□□□ -0.64
CNOT4-206ENST00000428680 CARMIL1Q5VZK9 1371 aa11.03□□□□□ -0.64
CNOT4-206ENST00000428680 UGGT2Q9NYU1 1516 aa11.02□□□□□ -0.65
CNOT4-206ENST00000428680 ABCC2Q92887 1545 aa11□□□□□ -0.65
CNOT4-206ENST00000428680 UACAQ9BZF9 1416 aa10.97□□□□□ -0.65
CNOT4-206ENST00000428680 IGF1RP08069 1367 aa10.96□□□□□ -0.65
CNOT4-206ENST00000428680 KDM6BO15054 1643 aa10.96□□□□□ -0.65
CNOT4-206ENST00000428680 DIP2BQ9P265 1576 aa10.96□□□□□ -0.66
CNOT4-206ENST00000428680 CFAP74Q9C0B2 1584 aa10.94□□□□□ -0.66
CNOT4-206ENST00000428680 CTTNBP2Q8WZ74 1663 aa10.93□□□□□ -0.66
CNOT4-206ENST00000428680 CFAP43Q8NDM7 1665 aa10.92□□□□□ -0.66
CNOT4-206ENST00000428680 KDM5BQ9UGL1 1544 aa10.91□□□□□ -0.66
CNOT4-206ENST00000428680 FAM69CQ0P6D2 419 aa10.9□□□□□ -0.66
CNOT4-206ENST00000428680 MAGI3Q5TCQ9 1506 aa10.89□□□□□ -0.67
CNOT4-206ENST00000428680 KIAA0556O60303 1618 aa10.89□□□□□ -0.67
CNOT4-206ENST00000428680 KIF13AQ9H1H9 1805 aa10.88□□□□□ -0.67
CNOT4-206ENST00000428680 EFCAB5A4FU69 1503 aa10.88□□□□□ -0.67
CNOT4-206ENST00000428680 ADCY10Q96PN6 1610 aa10.88□□□□□ -0.67
CNOT4-206ENST00000428680 WDR7Q9Y4E6 1490 aa10.86□□□□□ -0.67
CNOT4-206ENST00000428680 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
CNOT4-206ENST00000428680 NEO1Q92859 1461 aa10.84□□□□□ -0.67
CNOT4-206ENST00000428680 ASXL2Q76L83 1435 aa10.84□□□□□ -0.67
CNOT4-206ENST00000428680 POGZQ7Z3K3 1410 aa10.84□□□□□ -0.67
CNOT4-206ENST00000428680 MAP3K4Q9Y6R4 1608 aa10.83□□□□□ -0.68
CNOT4-206ENST00000428680 CDK11AQ9UQ88 783 aaPredicted RBP10.82□□□□□ -0.68
CNOT4-206ENST00000428680 ERCC6L2Q5T890 1561 aa10.81□□□□□ -0.68
CNOT4-206ENST00000428680 EPRSP07814 1512 aaKnown RBP10.81□□□□□ -0.68
CNOT4-206ENST00000428680 PLPPR3Q6T4P5 718 aa10.79□□□□□ -0.68
CNOT4-206ENST00000428680 ABCA8O94911 1581 aa10.79□□□□□ -0.68
CNOT4-206ENST00000428680 ARAP3Q8WWN8 1544 aa10.78□□□□□ -0.68
CNOT4-206ENST00000428680 ZCCHC11Q5TAX3 1644 aaKnown RBP10.78□□□□□ -0.68
CNOT4-206ENST00000428680 BCANQ96GW7 911 aa10.78□□□□□ -0.68
CNOT4-206ENST00000428680 PRXQ9BXM0 1461 aa10.78□□□□□ -0.68
CNOT4-206ENST00000428680 MAGI2Q86UL8 1455 aa10.77□□□□□ -0.68
CNOT4-206ENST00000428680 DISP1Q96F81 1524 aa10.77□□□□□ -0.69
CNOT4-206ENST00000428680 CD109Q6YHK3 1445 aa10.74□□□□□ -0.69
CNOT4-206ENST00000428680 SLC4A1APQ9BWU0 796 aaKnown RBP10.74□□□□□ -0.69
CNOT4-206ENST00000428680 KIF21BO75037 1637 aa10.74□□□□□ -0.69
CNOT4-206ENST00000428680 ITGAEP38570 1179 aa10.74□□□□□ -0.69
CNOT4-206ENST00000428680 CLIP1P30622 1438 aa10.74□□□□□ -0.69
CNOT4-206ENST00000428680 FMN1Q68DA7 1419 aa10.74□□□□□ -0.69
CNOT4-206ENST00000428680 ABCA9Q8IUA7 1624 aa10.72□□□□□ -0.69
CNOT4-206ENST00000428680 SAMD9Q5K651 1589 aa10.71□□□□□ -0.69
CNOT4-206ENST00000428680 RAPGEF6Q8TEU7 1601 aa10.71□□□□□ -0.69
CNOT4-206ENST00000428680 FANCAO15360 1455 aa10.71□□□□□ -0.7
CNOT4-206ENST00000428680 AKNAQ7Z591 1439 aa10.7□□□□□ -0.7
CNOT4-206ENST00000428680 CSRNP3Q8WYN3 585 aa10.7□□□□□ -0.7
CNOT4-206ENST00000428680 PCGF6Q9BYE7 350 aa10.7□□□□□ -0.7
CNOT4-206ENST00000428680 PLEKHD1A6NEE1 506 aa10.69□□□□□ -0.7
CNOT4-206ENST00000428680 HECW1Q76N89 1606 aa10.69□□□□□ -0.7
CNOT4-206ENST00000428680 CCDC18Q5T9S5 1454 aa10.69□□□□□ -0.7
CNOT4-206ENST00000428680 POLR3GLQ9BT43 218 aa10.66□□□□□ -0.7
CNOT4-206ENST00000428680 ADGRL1O94910 1474 aa10.65□□□□□ -0.7
CNOT4-206ENST00000428680 PLEKHH2Q8IVE3 1493 aa10.65□□□□□ -0.7
CNOT4-206ENST00000428680 FAM135AQ9P2D6 1515 aa10.65□□□□□ -0.7
CNOT4-206ENST00000428680 DENND4BO75064 1496 aaPredicted RBP10.64□□□□□ -0.71
CNOT4-206ENST00000428680 ZMYM4Q5VZL5 1548 aa10.64□□□□□ -0.71
CNOT4-206ENST00000428680 DMRT2Q9Y5R5 561 aa10.64□□□□□ -0.71
CNOT4-206ENST00000428680 PPRC1Q5VV67 1664 aaKnown RBP10.63□□□□□ -0.71
CNOT4-206ENST00000428680 FHOD3Q2V2M9 1422 aa10.62□□□□□ -0.71
CNOT4-206ENST00000428680 CNTLNQ9NXG0 1405 aa10.61□□□□□ -0.71
CNOT4-206ENST00000428680 TSPOAP1O95153 1857 aa10.61□□□□□ -0.71
CNOT4-206ENST00000428680 ARHGEF40Q8TER5 1519 aa10.61□□□□□ -0.71
CNOT4-206ENST00000428680 ARID3CA6NKF2 412 aa10.6□□□□□ -0.71
CNOT4-206ENST00000428680 PPP6R1Q9UPN7 881 aa10.6□□□□□ -0.71
CNOT4-206ENST00000428680 REREQ9P2R6 1566 aa10.59□□□□□ -0.71
CNOT4-206ENST00000428680 KIF14Q15058 1648 aa10.59□□□□□ -0.71
CNOT4-206ENST00000428680 EFCAB2Q5VUJ9 269 aa10.58□□□□□ -0.72
CNOT4-206ENST00000428680 PELP1Q8IZL8 1130 aaKnown RBP10.57□□□□□ -0.72
CNOT4-206ENST00000428680 STAG3Q9UJ98 1225 aa10.57□□□□□ -0.72
CNOT4-206ENST00000428680 ZFYVE16Q7Z3T8 1539 aa10.57□□□□□ -0.72
CNOT4-206ENST00000428680 CCER1Q8TC90 406 aaPredicted RBP10.56□□□□□ -0.72
CNOT4-206ENST00000428680 ATP10BO94823 1461 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms