RNA–Protein interactions for RNA: ENST00000428631.6

GRIA4-204, Transcript of glutamate ionotropic receptor AMPA type subunit 4, humanhuman

TSL 1 (best) BASIC

Gene GRIA4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4-204ENST00000428631 ZEB1P37275 1124 aaPredicted RBP8.99□□□□□ -0.97
GRIA4-204ENST00000428631 CTTNBP2Q8WZ74 1663 aa8.98□□□□□ -0.97
GRIA4-204ENST00000428631 MYT1Q01538 1121 aa8.97□□□□□ -0.97
GRIA4-204ENST00000428631 EFCAB5A4FU69 1503 aa8.97□□□□□ -0.97
GRIA4-204ENST00000428631 PBRM1Q86U86 1689 aa8.97□□□□□ -0.97
GRIA4-204ENST00000428631 FHAD1B1AJZ9 1412 aa8.96□□□□□ -0.98
GRIA4-204ENST00000428631 AQRO60306 1485 aaKnown RBP eCLIP8.96□□□□□ -0.98
GRIA4-204ENST00000428631 GRIN2BQ13224 1484 aa8.96□□□□□ -0.98
GRIA4-204ENST00000428631 THOC2Q8NI27 1593 aaKnown RBP8.95□□□□□ -0.98
GRIA4-204ENST00000428631 ADAMTS12P58397 1594 aa8.93□□□□□ -0.98
GRIA4-204ENST00000428631 P3H3Q8IVL6 736 aa8.93□□□□□ -0.98
GRIA4-204ENST00000428631 ZNF608Q9ULD9 1512 aaPredicted RBP8.92□□□□□ -0.98
GRIA4-204ENST00000428631 FHOD3Q2V2M9 1422 aa8.92□□□□□ -0.98
GRIA4-204ENST00000428631 KANK4Q5T7N3 995 aaPredicted RBP8.91□□□□□ -0.98
GRIA4-204ENST00000428631 MAP3K1Q13233 1512 aa8.91□□□□□ -0.98
GRIA4-204ENST00000428631 CCER1Q8TC90 406 aaPredicted RBP8.91□□□□□ -0.98
GRIA4-204ENST00000428631 FMN1Q68DA7 1419 aa8.9□□□□□ -0.98
GRIA4-204ENST00000428631 EIF4G3O43432 1585 aaKnown RBP8.9□□□□□ -0.98
GRIA4-204ENST00000428631 PCF11O94913 1555 aaKnown RBP8.9□□□□□ -0.98
GRIA4-204ENST00000428631 TIAM1Q13009 1591 aa8.9□□□□□ -0.98
GRIA4-204ENST00000428631 FYCO1Q9BQS8 1478 aa8.89□□□□□ -0.99
GRIA4-204ENST00000428631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.89□□□□□ -0.99
GRIA4-204ENST00000428631 SAMD9Q5K651 1589 aa8.89□□□□□ -0.99
GRIA4-204ENST00000428631 ATP1B4Q9UN42 357 aaPredicted RBP8.89□□□□□ -0.99
GRIA4-204ENST00000428631 SNAPC4Q5SXM2 1469 aa8.88□□□□□ -0.99
GRIA4-204ENST00000428631 HNRNPUL2Q1KMD3 747 aaKnown RBP8.88□□□□□ -0.99
GRIA4-204ENST00000428631 CASKIN1Q8WXD9 1431 aa8.88□□□□□ -0.99
GRIA4-204ENST00000428631 IQGAP2Q13576 1575 aa8.87□□□□□ -0.99
GRIA4-204ENST00000428631 CFAP43Q8NDM7 1665 aa8.87□□□□□ -0.99
GRIA4-204ENST00000428631 LRRC9Q6ZRR7 1453 aa8.86□□□□□ -0.99
GRIA4-204ENST00000428631 MAGI1Q96QZ7 1491 aaPredicted RBP8.86□□□□□ -0.99
GRIA4-204ENST00000428631 RRBP1Q9P2E9 1410 aaKnown RBP8.85□□□□□ -0.99
GRIA4-204ENST00000428631 GRIN2AQ12879 1464 aa8.84□□□□□ -0.99
GRIA4-204ENST00000428631 CCNB3Q8WWL7 1395 aa8.83□□□□□ -1
GRIA4-204ENST00000428631 SYNJ2O15056 1496 aa8.83□□□□□ -1
GRIA4-204ENST00000428631 KIAA0586Q9BVV6 1533 aa8.83□□□□□ -1
GRIA4-204ENST00000428631 CHMP7Q8WUX9 453 aaPredicted RBP8.83□□□□□ -1
GRIA4-204ENST00000428631 UGGT2Q9NYU1 1516 aa8.82□□□□□ -1
GRIA4-204ENST00000428631 FBLN2P98095 1184 aa8.8□□□□□ -1
GRIA4-204ENST00000428631 MTUS2Q5JR59 1369 aa8.79□□□□□ -1
GRIA4-204ENST00000428631 CCDC18Q5T9S5 1454 aa8.79□□□□□ -1
GRIA4-204ENST00000428631 HECW1Q76N89 1606 aa8.79□□□□□ -1
GRIA4-204ENST00000428631 PHLDB1Q86UU1 1377 aa8.79□□□□□ -1
GRIA4-204ENST00000428631 PHF23Q9BUL5 403 aaPredicted RBP8.78□□□□□ -1
GRIA4-204ENST00000428631 KIAA0556O60303 1618 aa8.77□□□□□ -1
GRIA4-204ENST00000428631 MSH5O43196 834 aa8.77□□□□□ -1.01
GRIA4-204ENST00000428631 CEP170Q5SW79 1584 aa8.77□□□□□ -1.01
GRIA4-204ENST00000428631 EHBP1L1Q8N3D4 1523 aa8.76□□□□□ -1.01
GRIA4-204ENST00000428631 ITGAEP38570 1179 aa8.76□□□□□ -1.01
GRIA4-204ENST00000428631 NUP160Q12769 1436 aa8.76□□□□□ -1.01
GRIA4-204ENST00000428631 DISP1Q96F81 1524 aa8.76□□□□□ -1.01
GRIA4-204ENST00000428631 FAM50AQ14320 339 aaKnown RBP8.76□□□□□ -1.01
GRIA4-204ENST00000428631 LRRIQ1Q96JM4 1722 aa8.75□□□□□ -1.01
GRIA4-204ENST00000428631 CARMIL2Q6F5E8 1435 aa8.74□□□□□ -1.01
GRIA4-204ENST00000428631 EPRSP07814 1512 aaKnown RBP8.74□□□□□ -1.01
GRIA4-204ENST00000428631 SUPT6HQ7KZ85 1726 aaKnown RBP8.73□□□□□ -1.01
GRIA4-204ENST00000428631 NCOA2Q15596 1464 aa8.73□□□□□ -1.01
GRIA4-204ENST00000428631 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.73□□□□□ -1.01
GRIA4-204ENST00000428631 FGD6Q6ZV73 1430 aa8.72□□□□□ -1.01
GRIA4-204ENST00000428631 JPH4Q96JJ6 628 aa8.72□□□□□ -1.01
GRIA4-204ENST00000428631 CDK13Q14004 1512 aaKnown RBP8.71□□□□□ -1.01
GRIA4-204ENST00000428631 MYOM3Q5VTT5 1437 aa8.71□□□□□ -1.01
GRIA4-204ENST00000428631 RAPGEF6Q8TEU7 1601 aa8.71□□□□□ -1.02
GRIA4-204ENST00000428631 CLSPNQ9HAW4 1339 aa8.71□□□□□ -1.02
GRIA4-204ENST00000428631 MAGI3Q5TCQ9 1506 aa8.7□□□□□ -1.02
GRIA4-204ENST00000428631 ARID3CA6NKF2 412 aa8.7□□□□□ -1.02
GRIA4-204ENST00000428631 DHX57Q6P158 1386 aaKnown RBP8.7□□□□□ -1.02
GRIA4-204ENST00000428631 NUP153P49790 1475 aaKnown RBP8.69□□□□□ -1.02
GRIA4-204ENST00000428631 CDK11AQ9UQ88 783 aaPredicted RBP8.69□□□□□ -1.02
GRIA4-204ENST00000428631 SETD5Q9C0A6 1442 aa8.69□□□□□ -1.02
GRIA4-204ENST00000428631 RAB3GAP2Q9H2M9 1393 aa8.68□□□□□ -1.02
GRIA4-204ENST00000428631 ARHGEF11O15085 1522 aa8.68□□□□□ -1.02
GRIA4-204ENST00000428631 CHD1O14646 1710 aa8.67□□□□□ -1.02
GRIA4-204ENST00000428631 PLB1Q6P1J6 1458 aa8.66□□□□□ -1.02
GRIA4-204ENST00000428631 PTPN23Q9H3S7 1636 aa8.66□□□□□ -1.02
GRIA4-204ENST00000428631 PRG4Q92954 1404 aaPredicted RBP8.65□□□□□ -1.02
GRIA4-204ENST00000428631 MIA2Q96PC5 1412 aa8.65□□□□□ -1.03
GRIA4-204ENST00000428631 TCOF1Q13428 1488 aaKnown RBP8.64□□□□□ -1.03
GRIA4-204ENST00000428631 TROQ12816 1431 aaPredicted RBP8.63□□□□□ -1.03
GRIA4-204ENST00000428631 ABCA8O94911 1581 aa8.63□□□□□ -1.03
GRIA4-204ENST00000428631 PTPRGP23470 1445 aa8.62□□□□□ -1.03
GRIA4-204ENST00000428631 HFM1A2PYH4 1435 aa8.61□□□□□ -1.03
GRIA4-204ENST00000428631 SHROOM2Q13796 1616 aa8.61□□□□□ -1.03
GRIA4-204ENST00000428631 PTPRKQ15262 1439 aa8.6□□□□□ -1.03
GRIA4-204ENST00000428631 PLEKHD1A6NEE1 506 aa8.59□□□□□ -1.03
GRIA4-204ENST00000428631 ADCY10Q96PN6 1610 aa8.59□□□□□ -1.03
GRIA4-204ENST00000428631 ITSN2Q9NZM3 1697 aa8.59□□□□□ -1.03
GRIA4-204ENST00000428631 ATP10BO94823 1461 aa8.58□□□□□ -1.04
GRIA4-204ENST00000428631 MAPKBP1O60336 1514 aa8.58□□□□□ -1.04
GRIA4-204ENST00000428631 NAIPQ13075 1403 aa8.58□□□□□ -1.04
GRIA4-204ENST00000428631 ZNF316A6NFI3 1004 aaPredicted RBP8.58□□□□□ -1.04
GRIA4-204ENST00000428631 KIF14Q15058 1648 aa8.58□□□□□ -1.04
GRIA4-204ENST00000428631 AKNAQ7Z591 1439 aa8.58□□□□□ -1.04
GRIA4-204ENST00000428631 FOXD1Q16676 465 aa8.57□□□□□ -1.04
GRIA4-204ENST00000428631 CFDP1Q9UEE9 299 aaPredicted RBP8.57□□□□□ -1.04
GRIA4-204ENST00000428631 UACAQ9BZF9 1416 aa8.57□□□□□ -1.04
GRIA4-204ENST00000428631 CLASP1Q7Z460 1538 aa8.57□□□□□ -1.04
GRIA4-204ENST00000428631 CHIC2Q9UKJ5 165 aa8.56□□□□□ -1.04
GRIA4-204ENST00000428631 RRP7BPQ9NSQ0 103 aa8.56□□□□□ -1.04
GRIA4-204ENST00000428631 DAPK1P53355 1430 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 1127.2 ms