RNA–Protein interactions for RNA: ENST00000428274.5

PHF1-205, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-205ENST00000428274 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
PHF1-205ENST00000428274 CARMIL1Q5VZK9 1371 aa22.47■■□□□ 1.19
PHF1-205ENST00000428274 PRG4Q92954 1404 aaPredicted RBP22.43■■□□□ 1.18
PHF1-205ENST00000428274 KIAA0586Q9BVV6 1533 aa22.42■■□□□ 1.18
PHF1-205ENST00000428274 RAPGEF2Q9Y4G8 1499 aa22.3■■□□□ 1.16
PHF1-205ENST00000428274 IQGAP2Q13576 1575 aa22.24■■□□□ 1.15
PHF1-205ENST00000428274 PRXQ9BXM0 1461 aa22.21■■□□□ 1.15
PHF1-205ENST00000428274 CARMIL2Q6F5E8 1435 aa22.15■■□□□ 1.14
PHF1-205ENST00000428274 TTBK1Q5TCY1 1321 aaPredicted RBP22.14■■□□□ 1.14
PHF1-205ENST00000428274 UGGT2Q9NYU1 1516 aa22.14■■□□□ 1.13
PHF1-205ENST00000428274 DISP1Q96F81 1524 aa22.13■■□□□ 1.13
PHF1-205ENST00000428274 ADCY10Q96PN6 1610 aa22.13■■□□□ 1.13
PHF1-205ENST00000428274 PTPRGP23470 1445 aa22.12■■□□□ 1.13
PHF1-205ENST00000428274 TNIKQ9UKE5 1360 aa22.12■■□□□ 1.13
PHF1-205ENST00000428274 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
PHF1-205ENST00000428274 CSRNP3Q8WYN3 585 aa22.11■■□□□ 1.13
PHF1-205ENST00000428274 EEA1Q15075 1411 aa22.08■■□□□ 1.13
PHF1-205ENST00000428274 NPM1P06748 294 aaKnown RBP eCLIP22.08■■□□□ 1.13
PHF1-205ENST00000428274 FAM69CQ0P6D2 419 aa22.08■■□□□ 1.13
PHF1-205ENST00000428274 CHIC1Q5VXU3 224 aa22.06■■□□□ 1.12
PHF1-205ENST00000428274 ABCC10Q5T3U5 1492 aa22.03■■□□□ 1.12
PHF1-205ENST00000428274 KIAA0556O60303 1618 aa22.03■■□□□ 1.12
PHF1-205ENST00000428274 MAPKBP1O60336 1514 aa22.03■■□□□ 1.12
PHF1-205ENST00000428274 KIF13AQ9H1H9 1805 aa22.02■■□□□ 1.12
PHF1-205ENST00000428274 UHRF1BP1LA0JNW5 1464 aa21.98■■□□□ 1.11
PHF1-205ENST00000428274 UACAQ9BZF9 1416 aa21.97■■□□□ 1.11
PHF1-205ENST00000428274 GOLGA3Q08378 1498 aa21.96■■□□□ 1.11
PHF1-205ENST00000428274 ABCC2Q92887 1545 aa21.96■■□□□ 1.11
PHF1-205ENST00000428274 DIP2BQ9P265 1576 aa21.94■■□□□ 1.1
PHF1-205ENST00000428274 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
PHF1-205ENST00000428274 KIF21BO75037 1637 aa21.88■■□□□ 1.09
PHF1-205ENST00000428274 KDM5BQ9UGL1 1544 aa21.88■■□□□ 1.09
PHF1-205ENST00000428274 ASXL2Q76L83 1435 aa21.87■■□□□ 1.09
PHF1-205ENST00000428274 PLB1Q6P1J6 1458 aa21.84■■□□□ 1.09
PHF1-205ENST00000428274 SAMD9Q5K651 1589 aa21.83■■□□□ 1.09
PHF1-205ENST00000428274 ABCA8O94911 1581 aa21.82■■□□□ 1.08
PHF1-205ENST00000428274 ZCCHC11Q5TAX3 1644 aaKnown RBP21.81■■□□□ 1.08
PHF1-205ENST00000428274 AEBP2Q6ZN18 517 aaPredicted RBP21.81■■□□□ 1.08
PHF1-205ENST00000428274 P3H3Q8IVL6 736 aa21.78■■□□□ 1.08
PHF1-205ENST00000428274 GLI2P10070 1586 aa21.76■■□□□ 1.07
PHF1-205ENST00000428274 TSPOAP1O95153 1857 aa21.74■■□□□ 1.07
PHF1-205ENST00000428274 EPRSP07814 1512 aaKnown RBP21.72■■□□□ 1.07
PHF1-205ENST00000428274 WDR7Q9Y4E6 1490 aa21.69■■□□□ 1.06
PHF1-205ENST00000428274 ARID3CA6NKF2 412 aa21.68■■□□□ 1.06
PHF1-205ENST00000428274 RANGAP1P46060 587 aaPredicted RBP21.68■■□□□ 1.06
PHF1-205ENST00000428274 COL17A1Q9UMD9 1497 aaPredicted RBP21.68■■□□□ 1.06
PHF1-205ENST00000428274 KDM6BO15054 1643 aa21.67■■□□□ 1.06
PHF1-205ENST00000428274 EFCAB5A4FU69 1503 aa21.67■■□□□ 1.06
PHF1-205ENST00000428274 PPRC1Q5VV67 1664 aaKnown RBP21.66■■□□□ 1.06
PHF1-205ENST00000428274 FHOD3Q2V2M9 1422 aa21.66■■□□□ 1.06
PHF1-205ENST00000428274 UBTFP17480 764 aaKnown RBP21.66■■□□□ 1.06
PHF1-205ENST00000428274 ATP10BO94823 1461 aa21.65■■□□□ 1.06
PHF1-205ENST00000428274 RAPGEF6Q8TEU7 1601 aa21.65■■□□□ 1.06
PHF1-205ENST00000428274 MAP3K4Q9Y6R4 1608 aa21.65■■□□□ 1.06
PHF1-205ENST00000428274 EHMT2Q96KQ7 1210 aa21.64■■□□□ 1.05
PHF1-205ENST00000428274 KDM4FA0A1W2PPD8 638 aa21.63■■□□□ 1.05
PHF1-205ENST00000428274 KCNH8Q96L42 1107 aa21.63■■□□□ 1.05
PHF1-205ENST00000428274 NUP153P49790 1475 aaKnown RBP21.58■■□□□ 1.05
PHF1-205ENST00000428274 CFAP43Q8NDM7 1665 aa21.54■■□□□ 1.04
PHF1-205ENST00000428274 ARHGAP35Q9NRY4 1499 aa21.54■■□□□ 1.04
PHF1-205ENST00000428274 TEX14Q8IWB6 1497 aa21.52■■□□□ 1.04
PHF1-205ENST00000428274 CD109Q6YHK3 1445 aa21.52■■□□□ 1.04
PHF1-205ENST00000428274 MAGI3Q5TCQ9 1506 aa21.5■■□□□ 1.03
PHF1-205ENST00000428274 FMN1Q68DA7 1419 aa21.47■■□□□ 1.03
PHF1-205ENST00000428274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.47■■□□□ 1.03
PHF1-205ENST00000428274 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
PHF1-205ENST00000428274 ABCA9Q8IUA7 1624 aa21.46■■□□□ 1.03
PHF1-205ENST00000428274 PLEKHD1A6NEE1 506 aa21.41■■□□□ 1.02
PHF1-205ENST00000428274 CDK13Q14004 1512 aaKnown RBP21.39■■□□□ 1.01
PHF1-205ENST00000428274 HECW1Q76N89 1606 aa21.38■■□□□ 1.01
PHF1-205ENST00000428274 ADGRL1O94910 1474 aa21.36■■□□□ 1.01
PHF1-205ENST00000428274 ARAP3Q8WWN8 1544 aa21.34■■□□□ 1.01
PHF1-205ENST00000428274 PHLDB1Q86UU1 1377 aa21.33■■□□□ 1
PHF1-205ENST00000428274 CLIP1P30622 1438 aa21.32■■□□□ 1
PHF1-205ENST00000428274 ATP1B4Q9UN42 357 aaPredicted RBP21.32■■□□□ 1
PHF1-205ENST00000428274 LRRIQ1Q96JM4 1722 aa21.32■■□□□ 1
PHF1-205ENST00000428274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.31■■□□□ 12e-7■■■■□ 20
PHF1-205ENST00000428274 RAPGEF3O95398 923 aa21.3■■□□□ 1
PHF1-205ENST00000428274 NEO1Q92859 1461 aa21.3■■□□□ 1
PHF1-205ENST00000428274 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
PHF1-205ENST00000428274 TTC37Q6PGP7 1564 aa21.27■■□□□ 1
PHF1-205ENST00000428274 CDK11AQ9UQ88 783 aaPredicted RBP21.27■■□□□ 1
PHF1-205ENST00000428274 PCF11O94913 1555 aaKnown RBP21.27■□□□□ 0.99
PHF1-205ENST00000428274 TROQ12816 1431 aaPredicted RBP21.22■□□□□ 0.99
PHF1-205ENST00000428274 CCDC18Q5T9S5 1454 aa21.21■□□□□ 0.99
PHF1-205ENST00000428274 FYCO1Q9BQS8 1478 aa21.21■□□□□ 0.99
PHF1-205ENST00000428274 PLCH2O75038 1416 aa21.2■□□□□ 0.98
PHF1-205ENST00000428274 FANCAO15360 1455 aa21.2■□□□□ 0.98
PHF1-205ENST00000428274 KIF14Q15058 1648 aa21.19■□□□□ 0.98
PHF1-205ENST00000428274 AKNAQ7Z591 1439 aa21.19■□□□□ 0.98
PHF1-205ENST00000428274 CFAP74Q9C0B2 1584 aa21.18■□□□□ 0.98
PHF1-205ENST00000428274 CEP162Q5TB80 1403 aa21.17■□□□□ 0.98
PHF1-205ENST00000428274 FRMPD1Q5SYB0 1578 aa21.16■□□□□ 0.98
PHF1-205ENST00000428274 MYO5CQ9NQX4 1742 aa21.15■□□□□ 0.98
PHF1-205ENST00000428274 LOC105371045A0A1W2PR82 267 aa21.14■□□□□ 0.97
PHF1-205ENST00000428274 RICTORQ6R327 1708 aa21.13■□□□□ 0.97
PHF1-205ENST00000428274 DENND4BO75064 1496 aaPredicted RBP21.13■□□□□ 0.97
PHF1-205ENST00000428274 EFCAB2Q5VUJ9 269 aa21.09■□□□□ 0.97
PHF1-205ENST00000428274 CDC42BPBQ9Y5S2 1711 aa21.07■□□□□ 0.96
PHF1-205ENST00000428274 SCAPERQ9BY12 1400 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms