RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 ERCC6L2Q5T890 1561 aa35.09■■■■□ 3.21
HSPG2-205ENST00000427897 PRG4Q92954 1404 aaPredicted RBP35.06■■■■□ 3.2
HSPG2-205ENST00000427897 RUSC2Q8N2Y8 1516 aa35.05■■■■□ 3.2
HSPG2-205ENST00000427897 KIAA0586Q9BVV6 1533 aa34.99■■■■□ 3.19
HSPG2-205ENST00000427897 RAPGEF2Q9Y4G8 1499 aa34.86■■■■□ 3.17
HSPG2-205ENST00000427897 IQGAP2Q13576 1575 aa34.74■■■■□ 3.15
HSPG2-205ENST00000427897 NPM1P06748 294 aaKnown RBP eCLIP34.74■■■■□ 3.15
HSPG2-205ENST00000427897 TTBK1Q5TCY1 1321 aaPredicted RBP34.74■■■■□ 3.15
HSPG2-205ENST00000427897 CARMIL2Q6F5E8 1435 aa34.73■■■■□ 3.15
HSPG2-205ENST00000427897 PTPRGP23470 1445 aa34.63■■■■□ 3.13
HSPG2-205ENST00000427897 TNIKQ9UKE5 1360 aa34.6■■■■□ 3.13
HSPG2-205ENST00000427897 CSRNP3Q8WYN3 585 aa34.59■■■■□ 3.13
HSPG2-205ENST00000427897 PRXQ9BXM0 1461 aa34.55■■■■□ 3.12
HSPG2-205ENST00000427897 CTTNBP2Q8WZ74 1663 aa34.54■■■■□ 3.12
HSPG2-205ENST00000427897 ADCY10Q96PN6 1610 aa34.51■■■■□ 3.11
HSPG2-205ENST00000427897 UGGT2Q9NYU1 1516 aa34.5■■■■□ 3.11
HSPG2-205ENST00000427897 EEA1Q15075 1411 aa34.49■■■■□ 3.11
HSPG2-205ENST00000427897 FAM9AQ8IZU1 332 aaPredicted RBP34.49■■■■□ 3.11
HSPG2-205ENST00000427897 DISP1Q96F81 1524 aa34.46■■■■□ 3.11
HSPG2-205ENST00000427897 CHIC1Q5VXU3 224 aa34.4■■■■□ 3.1
HSPG2-205ENST00000427897 KIAA0556O60303 1618 aa34.39■■■■□ 3.1
HSPG2-205ENST00000427897 GOLGA3Q08378 1498 aa34.39■■■■□ 3.1
HSPG2-205ENST00000427897 FAM69CQ0P6D2 419 aa34.37■■■■□ 3.09
HSPG2-205ENST00000427897 MAPKBP1O60336 1514 aa34.35■■■■□ 3.09
HSPG2-205ENST00000427897 UACAQ9BZF9 1416 aa34.35■■■■□ 3.09
HSPG2-205ENST00000427897 KIF13AQ9H1H9 1805 aa34.31■■■■□ 3.08
HSPG2-205ENST00000427897 ABCC2Q92887 1545 aa34.29■■■■□ 3.08
HSPG2-205ENST00000427897 ABCC10Q5T3U5 1492 aa34.28■■■■□ 3.08
HSPG2-205ENST00000427897 UHRF1BP1LA0JNW5 1464 aa34.27■■■■□ 3.08
HSPG2-205ENST00000427897 P3H3Q8IVL6 736 aa34.22■■■■□ 3.07
HSPG2-205ENST00000427897 RANGAP1P46060 587 aaPredicted RBP34.2■■■■□ 3.07
HSPG2-205ENST00000427897 DIP2BQ9P265 1576 aa34.19■■■■□ 3.06
HSPG2-205ENST00000427897 PLB1Q6P1J6 1458 aa34.14■■■■□ 3.06
HSPG2-205ENST00000427897 ASXL2Q76L83 1435 aa34.14■■■■□ 3.06
HSPG2-205ENST00000427897 EHMT2Q96KQ7 1210 aa34.14■■■■□ 3.06
HSPG2-205ENST00000427897 KIF21BO75037 1637 aa34.11■■■■□ 3.05
HSPG2-205ENST00000427897 KDM5BQ9UGL1 1544 aa34.1■■■■□ 3.05
HSPG2-205ENST00000427897 ZCCHC11Q5TAX3 1644 aaKnown RBP34.08■■■■□ 3.05
HSPG2-205ENST00000427897 UBTFP17480 764 aaKnown RBP34.07■■■■□ 3.04
HSPG2-205ENST00000427897 TSPOAP1O95153 1857 aa34.05■■■■□ 3.04
HSPG2-205ENST00000427897 ABCA8O94911 1581 aa34.02■■■■□ 3.04
HSPG2-205ENST00000427897 SAMD9Q5K651 1589 aa33.99■■■■□ 3.03
HSPG2-205ENST00000427897 ARID3CA6NKF2 412 aa33.94■■■■□ 3.02
HSPG2-205ENST00000427897 GLI2P10070 1586 aa33.93■■■■□ 3.02
HSPG2-205ENST00000427897 EPRSP07814 1512 aaKnown RBP33.91■■■■□ 3.02
HSPG2-205ENST00000427897 KCNH8Q96L42 1107 aa33.9■■■■□ 3.02
HSPG2-205ENST00000427897 WDR7Q9Y4E6 1490 aa33.89■■■■□ 3.02
HSPG2-205ENST00000427897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.89■■■■□ 3.02
HSPG2-205ENST00000427897 HNRNPUL2Q1KMD3 747 aaKnown RBP33.89■■■■□ 3.02
HSPG2-205ENST00000427897 FHOD3Q2V2M9 1422 aa33.87■■■■□ 3.01
HSPG2-205ENST00000427897 KDM6BO15054 1643 aa33.84■■■■□ 3.01
HSPG2-205ENST00000427897 EFCAB5A4FU69 1503 aa33.84■■■■□ 3.01
HSPG2-205ENST00000427897 RAPGEF6Q8TEU7 1601 aa33.83■■■■□ 3.01
HSPG2-205ENST00000427897 ATP10BO94823 1461 aa33.78■■■■□ 3
HSPG2-205ENST00000427897 MAP3K4Q9Y6R4 1608 aa33.76■■■■□ 3
HSPG2-205ENST00000427897 TEX14Q8IWB6 1497 aa33.74■■■□□ 2.99
HSPG2-205ENST00000427897 PPRC1Q5VV67 1664 aaKnown RBP33.71■■■□□ 2.99
HSPG2-205ENST00000427897 AEBP2Q6ZN18 517 aaPredicted RBP33.71■■■□□ 2.99
HSPG2-205ENST00000427897 CD109Q6YHK3 1445 aa33.69■■■□□ 2.98
HSPG2-205ENST00000427897 ATP1B4Q9UN42 357 aaPredicted RBP33.68■■■□□ 2.98
HSPG2-205ENST00000427897 CFAP43Q8NDM7 1665 aa33.65■■■□□ 2.98
HSPG2-205ENST00000427897 NUP153P49790 1475 aaKnown RBP33.64■■■□□ 2.98
HSPG2-205ENST00000427897 PLEKHD1A6NEE1 506 aa33.62■■■□□ 2.97
HSPG2-205ENST00000427897 FMN1Q68DA7 1419 aa33.59■■■□□ 2.97
HSPG2-205ENST00000427897 ARHGAP35Q9NRY4 1499 aa33.58■■■□□ 2.97
HSPG2-205ENST00000427897 MAGI3Q5TCQ9 1506 aa33.55■■■□□ 2.96
HSPG2-205ENST00000427897 ABCA9Q8IUA7 1624 aa33.46■■■□□ 2.95
HSPG2-205ENST00000427897 HECW1Q76N89 1606 aa33.45■■■□□ 2.95
HSPG2-205ENST00000427897 COL17A1Q9UMD9 1497 aaPredicted RBP33.44■■■□□ 2.94
HSPG2-205ENST00000427897 CDK11AQ9UQ88 783 aaPredicted RBP33.42■■■□□ 2.94
HSPG2-205ENST00000427897 CDK13Q14004 1512 aaKnown RBP33.42■■■□□ 2.94
HSPG2-205ENST00000427897 PHLDB1Q86UU1 1377 aa33.34■■■□□ 2.93
HSPG2-205ENST00000427897 CLIP1P30622 1438 aa33.34■■■□□ 2.93
HSPG2-205ENST00000427897 NEO1Q92859 1461 aa33.27■■■□□ 2.92
HSPG2-205ENST00000427897 ARAP3Q8WWN8 1544 aa33.27■■■□□ 2.92
HSPG2-205ENST00000427897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.26■■■□□ 2.91
HSPG2-205ENST00000427897 CASKIN1Q8WXD9 1431 aa33.22■■■□□ 2.91
HSPG2-205ENST00000427897 KDM4FA0A1W2PPD8 638 aa33.2■■■□□ 2.91
HSPG2-205ENST00000427897 PCF11O94913 1555 aaKnown RBP33.2■■■□□ 2.91
HSPG2-205ENST00000427897 TTC37Q6PGP7 1564 aa33.19■■■□□ 2.9
HSPG2-205ENST00000427897 RAPGEF3O95398 923 aa33.19■■■□□ 2.9
HSPG2-205ENST00000427897 CFAP74Q9C0B2 1584 aa33.18■■■□□ 2.9
HSPG2-205ENST00000427897 FANCAO15360 1455 aa33.18■■■□□ 2.9
HSPG2-205ENST00000427897 CCDC18Q5T9S5 1454 aa33.18■■■□□ 2.9
HSPG2-205ENST00000427897 LRRIQ1Q96JM4 1722 aa33.16■■■□□ 2.9
HSPG2-205ENST00000427897 TROQ12816 1431 aaPredicted RBP33.15■■■□□ 2.9
HSPG2-205ENST00000427897 AKNAQ7Z591 1439 aa33.14■■■□□ 2.9
HSPG2-205ENST00000427897 KIF14Q15058 1648 aa33.13■■■□□ 2.89
HSPG2-205ENST00000427897 FYCO1Q9BQS8 1478 aa33.13■■■□□ 2.89
HSPG2-205ENST00000427897 EFCAB2Q5VUJ9 269 aa33.09■■■□□ 2.89
HSPG2-205ENST00000427897 DENND4BO75064 1496 aaPredicted RBP33.09■■■□□ 2.89
HSPG2-205ENST00000427897 ADGRL1O94910 1474 aa33.09■■■□□ 2.89
HSPG2-205ENST00000427897 PLCH2O75038 1416 aa33.09■■■□□ 2.89
HSPG2-205ENST00000427897 MYO5CQ9NQX4 1742 aa33.08■■■□□ 2.89
HSPG2-205ENST00000427897 LOC105371045A0A1W2PR82 267 aa33.07■■■□□ 2.88
HSPG2-205ENST00000427897 CEP162Q5TB80 1403 aa33.07■■■□□ 2.88
HSPG2-205ENST00000427897 ARHGAP5Q13017 1502 aa32.98■■■□□ 2.87
HSPG2-205ENST00000427897 SCAPERQ9BY12 1400 aa32.97■■■□□ 2.87
HSPG2-205ENST00000427897 FRMPD1Q5SYB0 1578 aa32.96■■■□□ 2.87
HSPG2-205ENST00000427897 ARID4BQ4LE39 1312 aaPredicted RBP32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms