RNA–Protein interactions for RNA: ENST00000427683.2

EFNA4-203, Transcript of ephrin A4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFNA4, Length 1,052 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4-203ENST00000427683 SHROOM2Q13796 1616 aa23■■□□□ 1.27
EFNA4-203ENST00000427683 NUP160Q12769 1436 aa22.99■■□□□ 1.27
EFNA4-203ENST00000427683 KIF13AQ9H1H9 1805 aa22.98■■□□□ 1.27
EFNA4-203ENST00000427683 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
EFNA4-203ENST00000427683 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
EFNA4-203ENST00000427683 PRXQ9BXM0 1461 aa22.89■■□□□ 1.25
EFNA4-203ENST00000427683 CUL7Q14999 1698 aa22.89■■□□□ 1.25
EFNA4-203ENST00000427683 FAM9AQ8IZU1 332 aaPredicted RBP22.87■■□□□ 1.25
EFNA4-203ENST00000427683 RAPGEF2Q9Y4G8 1499 aa22.8■■□□□ 1.24
EFNA4-203ENST00000427683 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
EFNA4-203ENST00000427683 DIP2BQ9P265 1576 aa22.73■■□□□ 1.23
EFNA4-203ENST00000427683 JPH4Q96JJ6 628 aa22.73■■□□□ 1.23
EFNA4-203ENST00000427683 ABCC10Q5T3U5 1492 aa22.73■■□□□ 1.23
EFNA4-203ENST00000427683 MAPKBP1O60336 1514 aa22.71■■□□□ 1.23
EFNA4-203ENST00000427683 KIAA0586Q9BVV6 1533 aa22.71■■□□□ 1.23
EFNA4-203ENST00000427683 KIF21BO75037 1637 aa22.7■■□□□ 1.22
EFNA4-203ENST00000427683 ADCY10Q96PN6 1610 aa22.67■■□□□ 1.22
EFNA4-203ENST00000427683 KDM6BO15054 1643 aa22.61■■□□□ 1.21
EFNA4-203ENST00000427683 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
EFNA4-203ENST00000427683 KDM4FA0A1W2PPD8 638 aa22.6■■□□□ 1.21
EFNA4-203ENST00000427683 FAM69CQ0P6D2 419 aa22.6■■□□□ 1.21
EFNA4-203ENST00000427683 IQGAP2Q13576 1575 aa22.58■■□□□ 1.2
EFNA4-203ENST00000427683 LOC105371045A0A1W2PR82 267 aa22.5■■□□□ 1.19
EFNA4-203ENST00000427683 TSPOAP1O95153 1857 aa22.49■■□□□ 1.19
EFNA4-203ENST00000427683 EHMT2Q96KQ7 1210 aa22.49■■□□□ 1.19
EFNA4-203ENST00000427683 CARMIL2Q6F5E8 1435 aa22.48■■□□□ 1.19
EFNA4-203ENST00000427683 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
EFNA4-203ENST00000427683 CTTNBP2Q8WZ74 1663 aa22.46■■□□□ 1.19
EFNA4-203ENST00000427683 TNIKQ9UKE5 1360 aa22.46■■□□□ 1.19
EFNA4-203ENST00000427683 ILDR1Q86SU0 546 aaPredicted RBP22.45■■□□□ 1.18
EFNA4-203ENST00000427683 UGGT2Q9NYU1 1516 aa22.44■■□□□ 1.18
EFNA4-203ENST00000427683 PTPRGP23470 1445 aa22.42■■□□□ 1.18
EFNA4-203ENST00000427683 TTBK1Q5TCY1 1321 aaPredicted RBP22.42■■□□□ 1.18
EFNA4-203ENST00000427683 PPRC1Q5VV67 1664 aaKnown RBP22.42■■□□□ 1.18
EFNA4-203ENST00000427683 DISP1Q96F81 1524 aa22.41■■□□□ 1.18
EFNA4-203ENST00000427683 NPM1P06748 294 aaKnown RBP eCLIP22.41■■□□□ 1.18
EFNA4-203ENST00000427683 KIAA0556O60303 1618 aa22.37■■□□□ 1.17
EFNA4-203ENST00000427683 ADGRL1O94910 1474 aa22.34■■□□□ 1.17
EFNA4-203ENST00000427683 ABCC2Q92887 1545 aa22.31■■□□□ 1.16
EFNA4-203ENST00000427683 GLI2P10070 1586 aa22.3■■□□□ 1.16
EFNA4-203ENST00000427683 SAMD9Q5K651 1589 aa22.29■■□□□ 1.16
EFNA4-203ENST00000427683 ASXL2Q76L83 1435 aa22.27■■□□□ 1.16
EFNA4-203ENST00000427683 UACAQ9BZF9 1416 aa22.27■■□□□ 1.16
EFNA4-203ENST00000427683 UHRF1BP1LA0JNW5 1464 aa22.26■■□□□ 1.15
EFNA4-203ENST00000427683 ARHGAP35Q9NRY4 1499 aa22.26■■□□□ 1.15
EFNA4-203ENST00000427683 COL17A1Q9UMD9 1497 aaPredicted RBP22.26■■□□□ 1.15
EFNA4-203ENST00000427683 HECW2Q9P2P5 1572 aa22.25■■□□□ 1.15
EFNA4-203ENST00000427683 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
EFNA4-203ENST00000427683 EFCAB5A4FU69 1503 aa22.24■■□□□ 1.15
EFNA4-203ENST00000427683 CEP162Q5TB80 1403 aa22.23■■□□□ 1.15
EFNA4-203ENST00000427683 CLIP1P30622 1438 aa22.22■■□□□ 1.15
EFNA4-203ENST00000427683 PLB1Q6P1J6 1458 aa22.22■■□□□ 1.15
EFNA4-203ENST00000427683 MAP3K4Q9Y6R4 1608 aa22.2■■□□□ 1.15
EFNA4-203ENST00000427683 P3H3Q8IVL6 736 aa22.2■■□□□ 1.14
EFNA4-203ENST00000427683 FHOD3Q2V2M9 1422 aa22.17■■□□□ 1.14
EFNA4-203ENST00000427683 EPRSP07814 1512 aaKnown RBP22.16■■□□□ 1.14
EFNA4-203ENST00000427683 KDM5BQ9UGL1 1544 aa22.16■■□□□ 1.14
EFNA4-203ENST00000427683 ZCCHC11Q5TAX3 1644 aaKnown RBP22.14■■□□□ 1.14
EFNA4-203ENST00000427683 ABCA8O94911 1581 aa22.12■■□□□ 1.13
EFNA4-203ENST00000427683 TEX14Q8IWB6 1497 aa22.06■■□□□ 1.12
EFNA4-203ENST00000427683 FMN1Q68DA7 1419 aa22.06■■□□□ 1.12
EFNA4-203ENST00000427683 WDR7Q9Y4E6 1490 aa22.01■■□□□ 1.11
EFNA4-203ENST00000427683 RAPGEF6Q8TEU7 1601 aa21.98■■□□□ 1.11
EFNA4-203ENST00000427683 ARID3CA6NKF2 412 aa21.97■■□□□ 1.11
EFNA4-203ENST00000427683 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
EFNA4-203ENST00000427683 NUP153P49790 1475 aaKnown RBP21.95■■□□□ 1.1
EFNA4-203ENST00000427683 VPS8Q8N3P4 1428 aa21.94■■□□□ 1.1
EFNA4-203ENST00000427683 ATP10BO94823 1461 aa21.93■■□□□ 1.1
EFNA4-203ENST00000427683 MAGI3Q5TCQ9 1506 aa21.9■■□□□ 1.1
EFNA4-203ENST00000427683 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
EFNA4-203ENST00000427683 CFAP43Q8NDM7 1665 aa21.89■■□□□ 1.1
EFNA4-203ENST00000427683 KCNH8Q96L42 1107 aa21.89■■□□□ 1.09
EFNA4-203ENST00000427683 PCF11O94913 1555 aaKnown RBP21.88■■□□□ 1.09
EFNA4-203ENST00000427683 HECW1Q76N89 1606 aa21.84■■□□□ 1.09
EFNA4-203ENST00000427683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.84■■□□□ 1.09
EFNA4-203ENST00000427683 HNRNPUL2Q1KMD3 747 aaKnown RBP21.84■■□□□ 1.09
EFNA4-203ENST00000427683 CD109Q6YHK3 1445 aa21.82■■□□□ 1.08
EFNA4-203ENST00000427683 ATP1B4Q9UN42 357 aaPredicted RBP21.79■■□□□ 1.08
EFNA4-203ENST00000427683 CDK13Q14004 1512 aaKnown RBP21.79■■□□□ 1.08
EFNA4-203ENST00000427683 CCDC18Q5T9S5 1454 aa21.77■■□□□ 1.08
EFNA4-203ENST00000427683 FBXO41Q8TF61 875 aa21.77■■□□□ 1.08
EFNA4-203ENST00000427683 LRRIQ1Q96JM4 1722 aa21.77■■□□□ 1.08
EFNA4-203ENST00000427683 ADAMTSL3P82987 1691 aa21.76■■□□□ 1.07
EFNA4-203ENST00000427683 ABCA9Q8IUA7 1624 aa21.76■■□□□ 1.07
EFNA4-203ENST00000427683 ARAP3Q8WWN8 1544 aa21.75■■□□□ 1.07
EFNA4-203ENST00000427683 MAP3K1Q13233 1512 aa21.74■■□□□ 1.07
EFNA4-203ENST00000427683 PTPRMP28827 1452 aa21.72■■□□□ 1.07
EFNA4-203ENST00000427683 PLEKHD1A6NEE1 506 aa21.71■■□□□ 1.07
EFNA4-203ENST00000427683 CDK11AQ9UQ88 783 aaPredicted RBP21.68■■□□□ 1.06
EFNA4-203ENST00000427683 TIAM1Q13009 1591 aa21.67■■□□□ 1.06
EFNA4-203ENST00000427683 FRMPD1Q5SYB0 1578 aa21.67■■□□□ 1.06
EFNA4-203ENST00000427683 TROQ12816 1431 aaPredicted RBP21.65■■□□□ 1.06
EFNA4-203ENST00000427683 MADDQ8WXG6 1647 aa21.65■■□□□ 1.06
EFNA4-203ENST00000427683 LMTK3Q96Q04 1460 aa21.64■■□□□ 1.06
EFNA4-203ENST00000427683 KANK4Q5T7N3 995 aaPredicted RBP21.64■■□□□ 1.05
EFNA4-203ENST00000427683 BCORL1Q5H9F3 1711 aa21.63■■□□□ 1.05
EFNA4-203ENST00000427683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.61■■□□□ 1.05
EFNA4-203ENST00000427683 LRRC9Q6ZRR7 1453 aa21.61■■□□□ 1.05
EFNA4-203ENST00000427683 TTC37Q6PGP7 1564 aa21.61■■□□□ 1.05
EFNA4-203ENST00000427683 NEO1Q92859 1461 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms