RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
LSG1-202ENST00000427461 HECW2Q9P2P5 1572 aa17.3■□□□□ 0.36
LSG1-202ENST00000427461 MAPKBP1O60336 1514 aa17.29■□□□□ 0.36
LSG1-202ENST00000427461 NPM1P06748 294 aaKnown RBP eCLIP17.28■□□□□ 0.36
LSG1-202ENST00000427461 ADGRL1O94910 1474 aa17.27■□□□□ 0.36
LSG1-202ENST00000427461 ADCY10Q96PN6 1610 aa17.23■□□□□ 0.35
LSG1-202ENST00000427461 JPH4Q96JJ6 628 aa17.23■□□□□ 0.35
LSG1-202ENST00000427461 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.34
LSG1-202ENST00000427461 FBXO41Q8TF61 875 aa17.16■□□□□ 0.34
LSG1-202ENST00000427461 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
LSG1-202ENST00000427461 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
LSG1-202ENST00000427461 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
LSG1-202ENST00000427461 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
LSG1-202ENST00000427461 COL17A1Q9UMD9 1497 aaPredicted RBP17.07■□□□□ 0.32
LSG1-202ENST00000427461 TTBK1Q5TCY1 1321 aaPredicted RBP16.98■□□□□ 0.31
LSG1-202ENST00000427461 GLI2P10070 1586 aa16.97■□□□□ 0.31
LSG1-202ENST00000427461 ASXL2Q76L83 1435 aa16.96■□□□□ 0.31
LSG1-202ENST00000427461 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.31
LSG1-202ENST00000427461 LMTK3Q96Q04 1460 aa16.96■□□□□ 0.31
LSG1-202ENST00000427461 TOP2BQ02880 1626 aa16.95■□□□□ 0.3
LSG1-202ENST00000427461 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
LSG1-202ENST00000427461 PTPRGP23470 1445 aa16.91■□□□□ 0.3
LSG1-202ENST00000427461 PLB1Q6P1J6 1458 aa16.91■□□□□ 0.3
LSG1-202ENST00000427461 CUL7Q14999 1698 aa16.91■□□□□ 0.3
LSG1-202ENST00000427461 KIAA0586Q9BVV6 1533 aa16.9■□□□□ 0.3
LSG1-202ENST00000427461 MAP3K4Q9Y6R4 1608 aa16.88■□□□□ 0.29
LSG1-202ENST00000427461 ILDR2Q71H61 639 aa16.86■□□□□ 0.29
LSG1-202ENST00000427461 EPRSP07814 1512 aaKnown RBP16.86■□□□□ 0.29
LSG1-202ENST00000427461 TEX14Q8IWB6 1497 aa16.83■□□□□ 0.28
LSG1-202ENST00000427461 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
LSG1-202ENST00000427461 SOCS7O14512 581 aa16.8■□□□□ 0.28
LSG1-202ENST00000427461 KIF21BO75037 1637 aa16.79■□□□□ 0.28
LSG1-202ENST00000427461 UHRF1BP1LA0JNW5 1464 aa16.77■□□□□ 0.28
LSG1-202ENST00000427461 UACAQ9BZF9 1416 aa16.75■□□□□ 0.27
LSG1-202ENST00000427461 CARMIL2Q6F5E8 1435 aa16.73■□□□□ 0.27
LSG1-202ENST00000427461 KDM5BQ9UGL1 1544 aa16.73■□□□□ 0.27
LSG1-202ENST00000427461 ZCCHC11Q5TAX3 1644 aaKnown RBP16.73■□□□□ 0.27
LSG1-202ENST00000427461 DISP3Q9P2K9 1392 aa16.73■□□□□ 0.27
LSG1-202ENST00000427461 IGF1RP08069 1367 aa16.72■□□□□ 0.27
LSG1-202ENST00000427461 PTPRMP28827 1452 aa16.72■□□□□ 0.27
LSG1-202ENST00000427461 PCF11O94913 1555 aaKnown RBP16.67■□□□□ 0.26
LSG1-202ENST00000427461 ADAMTSL3P82987 1691 aa16.66■□□□□ 0.26
LSG1-202ENST00000427461 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
LSG1-202ENST00000427461 CD109Q6YHK3 1445 aa16.64■□□□□ 0.25
LSG1-202ENST00000427461 WDR7Q9Y4E6 1490 aa16.64■□□□□ 0.25
LSG1-202ENST00000427461 MAGI3Q5TCQ9 1506 aa16.64■□□□□ 0.25
LSG1-202ENST00000427461 IQGAP2Q13576 1575 aa16.64■□□□□ 0.25
LSG1-202ENST00000427461 CERKQ8TCT0 537 aa16.63■□□□□ 0.25
LSG1-202ENST00000427461 HSPA2P54652 639 aa16.61■□□□□ 0.25
LSG1-202ENST00000427461 KCNH8Q96L42 1107 aa16.61■□□□□ 0.25
LSG1-202ENST00000427461 CFAP43Q8NDM7 1665 aa16.61■□□□□ 0.25
LSG1-202ENST00000427461 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
LSG1-202ENST00000427461 SUPT5HO00267 1087 aaKnown RBP16.58■□□□□ 0.24
LSG1-202ENST00000427461 CARMIL1Q5VZK9 1371 aa16.58■□□□□ 0.24
LSG1-202ENST00000427461 MADDQ8WXG6 1647 aa16.58■□□□□ 0.24
LSG1-202ENST00000427461 BCORL1Q5H9F3 1711 aa16.55■□□□□ 0.24
LSG1-202ENST00000427461 ARAP3Q8WWN8 1544 aa16.53■□□□□ 0.24
LSG1-202ENST00000427461 SPATA31D1Q6ZQQ2 1576 aa16.52■□□□□ 0.24
LSG1-202ENST00000427461 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
LSG1-202ENST00000427461 KIAA0556O60303 1618 aa16.51■□□□□ 0.23
LSG1-202ENST00000427461 RIMS1Q86UR5 1692 aaKnown RBP16.5■□□□□ 0.23
LSG1-202ENST00000427461 UGGT2Q9NYU1 1516 aa16.5■□□□□ 0.23
LSG1-202ENST00000427461 ARID4BQ4LE39 1312 aaPredicted RBP16.49■□□□□ 0.23
LSG1-202ENST00000427461 RAPGEF3O95398 923 aa16.49■□□□□ 0.23
LSG1-202ENST00000427461 PHF23Q9BUL5 403 aaPredicted RBP16.47■□□□□ 0.23
LSG1-202ENST00000427461 ABCA8O94911 1581 aa16.41■□□□□ 0.22
LSG1-202ENST00000427461 FRMPD1Q5SYB0 1578 aa16.4■□□□□ 0.22
LSG1-202ENST00000427461 ARID3CA6NKF2 412 aa16.39■□□□□ 0.21
LSG1-202ENST00000427461 PHLDB1Q86UU1 1377 aa16.35■□□□□ 0.21
LSG1-202ENST00000427461 ABCA9Q8IUA7 1624 aa16.34■□□□□ 0.21
LSG1-202ENST00000427461 RAPGEF2Q9Y4G8 1499 aa16.33■□□□□ 0.2
LSG1-202ENST00000427461 ARHGEF40Q8TER5 1519 aa16.32■□□□□ 0.2
LSG1-202ENST00000427461 SIGLEC1Q9BZZ2 1709 aa16.32■□□□□ 0.2
LSG1-202ENST00000427461 NEO1Q92859 1461 aa16.31■□□□□ 0.2
LSG1-202ENST00000427461 STRCQ7RTU9 1775 aa16.3■□□□□ 0.2
LSG1-202ENST00000427461 ATP10BO94823 1461 aa16.29■□□□□ 0.2
LSG1-202ENST00000427461 MLECQ14165 292 aa16.29■□□□□ 0.2
LSG1-202ENST00000427461 YEATS2Q9ULM3 1422 aa16.27■□□□□ 0.19
LSG1-202ENST00000427461 CTTNBP2Q8WZ74 1663 aa16.26■□□□□ 0.19
LSG1-202ENST00000427461 FER1L4A9Z1Z3 1794 aa16.26■□□□□ 0.19
LSG1-202ENST00000427461 RICTORQ6R327 1708 aa16.25■□□□□ 0.19
LSG1-202ENST00000427461 GOLGA3Q08378 1498 aa16.25■□□□□ 0.19
LSG1-202ENST00000427461 FANCAO15360 1455 aa16.24■□□□□ 0.19
LSG1-202ENST00000427461 POGZQ7Z3K3 1410 aa16.24■□□□□ 0.19
LSG1-202ENST00000427461 TTC37Q6PGP7 1564 aa16.24■□□□□ 0.19
LSG1-202ENST00000427461 PREX1Q8TCU6 1659 aa16.24■□□□□ 0.19
LSG1-202ENST00000427461 CEBPAP49715 358 aaPredicted RBP16.22■□□□□ 0.19
LSG1-202ENST00000427461 DMRT2Q9Y5R5 561 aa16.22■□□□□ 0.19
LSG1-202ENST00000427461 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
LSG1-202ENST00000427461 AKNAQ7Z591 1439 aa16.2■□□□□ 0.18
LSG1-202ENST00000427461 P3H3Q8IVL6 736 aa16.19■□□□□ 0.18
LSG1-202ENST00000427461 LTBP4Q8N2S1 1624 aa16.19■□□□□ 0.18
LSG1-202ENST00000427461 FHOD3Q2V2M9 1422 aa16.18■□□□□ 0.18
LSG1-202ENST00000427461 ZFYVE16Q7Z3T8 1539 aa16.17■□□□□ 0.18
LSG1-202ENST00000427461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
LSG1-202ENST00000427461 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
LSG1-202ENST00000427461 ZMYM4Q5VZL5 1548 aa16.14■□□□□ 0.18
LSG1-202ENST00000427461 EFCAB5A4FU69 1503 aa16.14■□□□□ 0.17
LSG1-202ENST00000427461 PTPRTO14522 1441 aa16.13■□□□□ 0.17
LSG1-202ENST00000427461 ARHGEF12Q9NZN5 1544 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms