RNA–Protein interactions for RNA: ENST00000426304.5

NHEJ1-204, Transcript of non-homologous end joining factor 1, human

TSL 3

Gene NHEJ1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NHEJ1-204	ENST00000426304	ABCA10	Q8WWZ4	1543 aa		14.39	□□□□□ -0.11
NHEJ1-204	ENST00000426304	ABCA5	Q8WWZ7	1642 aa		14.38	□□□□□ -0.11
NHEJ1-204	ENST00000426304	GRIN2A	Q12879	1464 aa		14.3	□□□□□ -0.12
NHEJ1-204	ENST00000426304	SCAF1	Q9H7N4	1312 aa	Known RBP	14.29	□□□□□ -0.12
NHEJ1-204	ENST00000426304	ADAMTS12	P58397	1594 aa		14.29	□□□□□ -0.12
NHEJ1-204	ENST00000426304	NUP160	Q12769	1436 aa		14.27	□□□□□ -0.12
NHEJ1-204	ENST00000426304	WRN	Q14191	1432 aa	Predicted RBP eCLIP	14.26	□□□□□ -0.13
NHEJ1-204	ENST00000426304	SHROOM2	Q13796	1616 aa		14.26	□□□□□ -0.13
NHEJ1-204	ENST00000426304	CEP170	Q5SW79	1584 aa		14.25	□□□□□ -0.13
NHEJ1-204	ENST00000426304	BIVM-ERCC5	R4GMW8	1640 aa		14.24	□□□□□ -0.13
NHEJ1-204	ENST00000426304	TOP2B	Q02880	1626 aa		14.23	□□□□□ -0.13
NHEJ1-204	ENST00000426304	FHAD1	B1AJZ9	1412 aa		14.23	□□□□□ -0.13
NHEJ1-204	ENST00000426304	ERICH3	Q5RHP9	1530 aa		14.22	□□□□□ -0.13
NHEJ1-204	ENST00000426304	FOXD4L1	Q9NU39	408 aa		14.22	□□□□□ -0.13
NHEJ1-204	ENST00000426304	ERCC6L2	Q5T890	1561 aa		14.22	□□□□□ -0.13
NHEJ1-204	ENST00000426304	SLC24A1	O60721	1099 aa		14.14	□□□□□ -0.15
NHEJ1-204	ENST00000426304	KIF13A	Q9H1H9	1805 aa		14.13	□□□□□ -0.15
NHEJ1-204	ENST00000426304	PRG4	Q92954	1404 aa	Predicted RBP	14.1	□□□□□ -0.15
NHEJ1-204	ENST00000426304	RUSC2	Q8N2Y8	1516 aa		14.1	□□□□□ -0.15
NHEJ1-204	ENST00000426304	MAPKBP1	O60336	1514 aa		14.07	□□□□□ -0.16
NHEJ1-204	ENST00000426304	ABCC10	Q5T3U5	1492 aa		14.06	□□□□□ -0.16
NHEJ1-204	ENST00000426304	SUPT5H	O00267	1087 aa	Known RBP	14.05	□□□□□ -0.16
NHEJ1-204	ENST00000426304	JPH4	Q96JJ6	628 aa		14.05	□□□□□ -0.16
NHEJ1-204	ENST00000426304	RTN4	Q9NQC3	1192 aa	Known RBP	14.04	□□□□□ -0.16
NHEJ1-204	ENST00000426304	DIP2B	Q9P265	1576 aa		14.02	□□□□□ -0.16
NHEJ1-204	ENST00000426304	AMER1	Q5JTC6	1135 aa	Predicted RBP	14.01	□□□□□ -0.17
NHEJ1-204	ENST00000426304	NPM1	P06748	294 aa	Known RBP eCLIP	14	□□□□□ -0.17
NHEJ1-204	ENST00000426304	ADCY10	Q96PN6	1610 aa		14	□□□□□ -0.17
NHEJ1-204	ENST00000426304	CUL7	Q14999	1698 aa		13.99	□□□□□ -0.17
NHEJ1-204	ENST00000426304	KIAA0586	Q9BVV6	1533 aa		13.99	□□□□□ -0.17
NHEJ1-204	ENST00000426304	FAM69C	Q0P6D2	419 aa		13.97	□□□□□ -0.17
NHEJ1-204	ENST00000426304	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.95	□□□□□ -0.18
NHEJ1-204	ENST00000426304	KDM6B	O15054	1643 aa		13.94	□□□□□ -0.18
NHEJ1-204	ENST00000426304	KIF27	Q86VH2	1401 aa		13.93	□□□□□ -0.18
NHEJ1-204	ENST00000426304	RNF216	Q9NWF9	866 aa	Predicted RBP	13.93	□□□□□ -0.18
NHEJ1-204	ENST00000426304	MSH5	O43196	834 aa		13.91	□□□□□ -0.18
NHEJ1-204	ENST00000426304	IGF1R	P08069	1367 aa		13.9	□□□□□ -0.18
NHEJ1-204	ENST00000426304	PTPRG	P23470	1445 aa		13.86	□□□□□ -0.19
NHEJ1-204	ENST00000426304	CARMIL2	Q6F5E8	1435 aa		13.86	□□□□□ -0.19
NHEJ1-204	ENST00000426304	TSPOAP1	O95153	1857 aa		13.86	□□□□□ -0.19
NHEJ1-204	ENST00000426304	ABCC2	Q92887	1545 aa		13.85	□□□□□ -0.19
NHEJ1-204	ENST00000426304	GLI2	P10070	1586 aa		13.85	□□□□□ -0.19
NHEJ1-204	ENST00000426304	TNIK	Q9UKE5	1360 aa		13.84	□□□□□ -0.19
NHEJ1-204	ENST00000426304	PLB1	Q6P1J6	1458 aa		13.84	□□□□□ -0.19
NHEJ1-204	ENST00000426304	UHRF1BP1L	A0JNW5	1464 aa		13.83	□□□□□ -0.2
NHEJ1-204	ENST00000426304	IQGAP2	Q13576	1575 aa		13.83	□□□□□ -0.2
NHEJ1-204	ENST00000426304	CARMIL1	Q5VZK9	1371 aa		13.82	□□□□□ -0.2
NHEJ1-204	ENST00000426304	KDM4F	A0A1W2PPD8	638 aa		13.8	□□□□□ -0.2
NHEJ1-204	ENST00000426304	PPRC1	Q5VV67	1664 aa	Known RBP	13.79	□□□□□ -0.2
NHEJ1-204	ENST00000426304	ASXL2	Q76L83	1435 aa		13.79	□□□□□ -0.2
NHEJ1-204	ENST00000426304	UACA	Q9BZF9	1416 aa		13.77	□□□□□ -0.21
NHEJ1-204	ENST00000426304	KDM5B	Q9UGL1	1544 aa		13.75	□□□□□ -0.21
NHEJ1-204	ENST00000426304	MAP3K4	Q9Y6R4	1608 aa		13.75	□□□□□ -0.21
NHEJ1-204	ENST00000426304	DISP1	Q96F81	1524 aa		13.74	□□□□□ -0.21
NHEJ1-204	ENST00000426304	TEX14	Q8IWB6	1497 aa		13.74	□□□□□ -0.21
NHEJ1-204	ENST00000426304	UGGT2	Q9NYU1	1516 aa		13.74	□□□□□ -0.21
NHEJ1-204	ENST00000426304	EPRS	P07814	1512 aa	Known RBP	13.73	□□□□□ -0.21
NHEJ1-204	ENST00000426304	ADGRL1	O94910	1474 aa		13.71	□□□□□ -0.21
NHEJ1-204	ENST00000426304	KIAA0556	O60303	1618 aa		13.71	□□□□□ -0.22
NHEJ1-204	ENST00000426304	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.71	□□□□□ -0.22
NHEJ1-204	ENST00000426304	RAPGEF2	Q9Y4G8	1499 aa		13.7	□□□□□ -0.22
NHEJ1-204	ENST00000426304	SLC4A2	P04920	1241 aa		13.69	□□□□□ -0.22
NHEJ1-204	ENST00000426304	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.67	□□□□□ -0.22
NHEJ1-204	ENST00000426304	WDR7	Q9Y4E6	1490 aa		13.66	□□□□□ -0.22
NHEJ1-204	ENST00000426304	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.65	□□□□□ -0.22
NHEJ1-204	ENST00000426304	ATXN8OS	P0DMR3	200 aa		13.64	□□□□□ -0.23
NHEJ1-204	ENST00000426304	FKBP8	Q14318	412 aa		13.64	□□□□□ -0.23
NHEJ1-204	ENST00000426304	CFAP43	Q8NDM7	1665 aa		13.63	□□□□□ -0.23
NHEJ1-204	ENST00000426304	CTTNBP2	Q8WZ74	1663 aa		13.63	□□□□□ -0.23
NHEJ1-204	ENST00000426304	HOXD11	P31277	338 aa	Predicted RBP	13.63	□□□□□ -0.23
NHEJ1-204	ENST00000426304	GOLGA3	Q08378	1498 aa		13.62	□□□□□ -0.23
NHEJ1-204	ENST00000426304	MAGI3	Q5TCQ9	1506 aa		13.62	□□□□□ -0.23
NHEJ1-204	ENST00000426304	HECW2	Q9P2P5	1572 aa		13.59	□□□□□ -0.23
NHEJ1-204	ENST00000426304	ABCA8	O94911	1581 aa		13.58	□□□□□ -0.23
NHEJ1-204	ENST00000426304	ILDR1	Q86SU0	546 aa	Predicted RBP	13.58	□□□□□ -0.24
NHEJ1-204	ENST00000426304	CD109	Q6YHK3	1445 aa		13.56	□□□□□ -0.24
NHEJ1-204	ENST00000426304	MYCN	P04198	464 aa	Predicted RBP	13.56	□□□□□ -0.24
NHEJ1-204	ENST00000426304	DMRT2	Q9Y5R5	561 aa		13.56	□□□□□ -0.24
NHEJ1-204	ENST00000426304	ARAP3	Q8WWN8	1544 aa		13.51	□□□□□ -0.25
NHEJ1-204	ENST00000426304	PRX	Q9BXM0	1461 aa		13.51	□□□□□ -0.25
NHEJ1-204	ENST00000426304	PHLDB1	Q86UU1	1377 aa		13.5	□□□□□ -0.25
NHEJ1-204	ENST00000426304	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.49	□□□□□ -0.25
NHEJ1-204	ENST00000426304	KIF21B	O75037	1637 aa		13.48	□□□□□ -0.25
NHEJ1-204	ENST00000426304	ABCA9	Q8IUA7	1624 aa		13.47	□□□□□ -0.25
NHEJ1-204	ENST00000426304	KCNH8	Q96L42	1107 aa		13.45	□□□□□ -0.26
NHEJ1-204	ENST00000426304	NEO1	Q92859	1461 aa		13.43	□□□□□ -0.26
NHEJ1-204	ENST00000426304	ATP10B	O94823	1461 aa		13.42	□□□□□ -0.26
NHEJ1-204	ENST00000426304	SAMD9	Q5K651	1589 aa		13.42	□□□□□ -0.26
NHEJ1-204	ENST00000426304	ADAMTSL3	P82987	1691 aa		13.42	□□□□□ -0.26
NHEJ1-204	ENST00000426304	RAPGEF6	Q8TEU7	1601 aa		13.4	□□□□□ -0.26
NHEJ1-204	ENST00000426304	PTPRM	P28827	1452 aa		13.39	□□□□□ -0.27
NHEJ1-204	ENST00000426304	BCORL1	Q5H9F3	1711 aa		13.37	□□□□□ -0.27
NHEJ1-204	ENST00000426304	FRMPD1	Q5SYB0	1578 aa		13.36	□□□□□ -0.27
NHEJ1-204	ENST00000426304	FBXO41	Q8TF61	875 aa		13.35	□□□□□ -0.27
NHEJ1-204	ENST00000426304	CFAP74	Q9C0B2	1584 aa		13.35	□□□□□ -0.27
NHEJ1-204	ENST00000426304	ARHGEF40	Q8TER5	1519 aa		13.34	□□□□□ -0.27
NHEJ1-204	ENST00000426304	PCF11	O94913	1555 aa	Known RBP	13.33	□□□□□ -0.28
NHEJ1-204	ENST00000426304	MADD	Q8WXG6	1647 aa		13.32	□□□□□ -0.28
NHEJ1-204	ENST00000426304	NUP153	P49790	1475 aa	Known RBP	13.32	□□□□□ -0.28
NHEJ1-204	ENST00000426304	EEA1	Q15075	1411 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms