RNA–Protein interactions for RNA: ENST00000425416.6

LPIN1-207, Transcript of lipin 1, humanhuman

TSL 2 BASIC

Gene LPIN1, Length 5,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-207ENST00000425416 HNRNPUQ00839 825 aaKnown RBP eCLIP12.4□□□□□ -0.43
LPIN1-207ENST00000425416 ARXQ96QS3 562 aa12.39□□□□□ -0.43
LPIN1-207ENST00000425416 MSNP26038 577 aaKnown RBP12.39□□□□□ -0.43
LPIN1-207ENST00000425416 ZCCHC6Q5VYS8 1495 aaKnown RBP12.39□□□□□ -0.43
LPIN1-207ENST00000425416 TONSLQ96HA7 1378 aa12.38□□□□□ -0.43
LPIN1-207ENST00000425416 GOLGA6L1Q8N7Z2 621 aa12.36□□□□□ -0.43
LPIN1-207ENST00000425416 TMC1Q8TDI8 760 aa12.36□□□□□ -0.43
LPIN1-207ENST00000425416 PNNQ9H307 717 aaKnown RBP12.35□□□□□ -0.43
LPIN1-207ENST00000425416 MS4A1P11836 297 aa12.34□□□□□ -0.43
LPIN1-207ENST00000425416 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
LPIN1-207ENST00000425416 NACADO15069 1562 aa12.32□□□□□ -0.44
LPIN1-207ENST00000425416 STAG3Q9UJ98 1225 aa12.3□□□□□ -0.44
LPIN1-207ENST00000425416 SCRIBQ14160 1630 aa12.3□□□□□ -0.44
LPIN1-207ENST00000425416 EEA1Q15075 1411 aa12.3□□□□□ -0.44
LPIN1-207ENST00000425416 SCAF1Q9H7N4 1312 aaKnown RBP12.29□□□□□ -0.44
LPIN1-207ENST00000425416 NOC3LQ8WTT2 800 aaKnown RBP12.28□□□□□ -0.44
LPIN1-207ENST00000425416 GOLGA6L4A6NEF3 574 aa12.28□□□□□ -0.44
LPIN1-207ENST00000425416 HTATSF1O43719 755 aaKnown RBP12.28□□□□□ -0.44
LPIN1-207ENST00000425416 TPM4P67936 248 aa12.27□□□□□ -0.45
LPIN1-207ENST00000425416 FAM9BQ8IZU0 186 aa12.25□□□□□ -0.45
LPIN1-207ENST00000425416 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
LPIN1-207ENST00000425416 MCCP23508 829 aa12.25□□□□□ -0.45
LPIN1-207ENST00000425416 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
LPIN1-207ENST00000425416 CFAP53Q96M91 514 aa12.24□□□□□ -0.45
LPIN1-207ENST00000425416 CCDC34Q96HJ3 373 aa12.24□□□□□ -0.45
LPIN1-207ENST00000425416 RSF1Q96T23 1441 aaPredicted RBP12.23□□□□□ -0.45
LPIN1-207ENST00000425416 A0A0U1RQG5 324 aaPredicted RBP12.22□□□□□ -0.45
LPIN1-207ENST00000425416 SYAP1Q96A49 352 aaPredicted RBP12.21□□□□□ -0.45
LPIN1-207ENST00000425416 DRC7Q8IY82 874 aa12.21□□□□□ -0.45
LPIN1-207ENST00000425416 NOP58Q9Y2X3 529 aaKnown RBP12.21□□□□□ -0.45
LPIN1-207ENST00000425416 CDCA8Q53HL2 280 aa12.21□□□□□ -0.46
LPIN1-207ENST00000425416 HSCBQ8IWL3 235 aa12.2□□□□□ -0.46
LPIN1-207ENST00000425416 MRS2Q9HD23 443 aa12.2□□□□□ -0.46
LPIN1-207ENST00000425416 EIF4G2P78344 907 aaKnown RBP eCLIP12.2□□□□□ -0.462e-7■■■■■ 41.3
LPIN1-207ENST00000425416 PLCB2Q00722 1185 aa12.2□□□□□ -0.46
LPIN1-207ENST00000425416 TSPY4P0CV99 314 aa12.19□□□□□ -0.46
LPIN1-207ENST00000425416 TSPY10P0CW01 314 aa12.19□□□□□ -0.46
LPIN1-207ENST00000425416 FGD1P98174 961 aa12.17□□□□□ -0.46
LPIN1-207ENST00000425416 CSPP1Q1MSJ5 1256 aa12.16□□□□□ -0.46
LPIN1-207ENST00000425416 GPS2Q13227 327 aa12.16□□□□□ -0.46
LPIN1-207ENST00000425416 FTSJ3Q8IY81 847 aaKnown RBP12.16□□□□□ -0.46
LPIN1-207ENST00000425416 GBP4Q96PP9 640 aa12.16□□□□□ -0.46
LPIN1-207ENST00000425416 GOLGA6L3A6NEY3 463 aa12.15□□□□□ -0.47
LPIN1-207ENST00000425416 CHMP7Q8WUX9 453 aaPredicted RBP12.14□□□□□ -0.47
LPIN1-207ENST00000425416 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
LPIN1-207ENST00000425416 LAS1LQ9Y4W2 734 aaKnown RBP12.13□□□□□ -0.47
LPIN1-207ENST00000425416 PPP4R2Q9NY27 417 aa12.12□□□□□ -0.47
LPIN1-207ENST00000425416 ZNF777Q9ULD5 760 aaPredicted RBP12.11□□□□□ -0.47
LPIN1-207ENST00000425416 CHGAP10645 457 aaKnown RBP12.11□□□□□ -0.47
LPIN1-207ENST00000425416 CLSTN1O94985 981 aa12.1□□□□□ -0.47
LPIN1-207ENST00000425416 KCNJ4P48050 445 aa12.1□□□□□ -0.47
LPIN1-207ENST00000425416 CCDC70Q6NSX1 233 aa12.1□□□□□ -0.47
LPIN1-207ENST00000425416 CEP89Q96ST8 783 aa12.1□□□□□ -0.47
LPIN1-207ENST00000425416 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
LPIN1-207ENST00000425416 TPM3P06753 285 aa12.09□□□□□ -0.47
LPIN1-207ENST00000425416 NUDCQ9Y266 331 aa12.08□□□□□ -0.48
LPIN1-207ENST00000425416 DCAF1Q9Y4B6 1507 aa12.08□□□□□ -0.48
LPIN1-207ENST00000425416 DDX10Q13206 875 aaKnown RBP12.08□□□□□ -0.48
LPIN1-207ENST00000425416 RRP12Q5JTH9 1297 aaKnown RBP12.08□□□□□ -0.48
LPIN1-207ENST00000425416 PHF14O94880 888 aa12.07□□□□□ -0.48
LPIN1-207ENST00000425416 NOM1Q5C9Z4 860 aaKnown RBP12.07□□□□□ -0.48
LPIN1-207ENST00000425416 RSPH6AQ9H0K4 717 aa12.07□□□□□ -0.48
LPIN1-207ENST00000425416 GNL2Q13823 731 aaKnown RBP12.07□□□□□ -0.48
LPIN1-207ENST00000425416 CHMP4CQ96CF2 233 aa12.07□□□□□ -0.48
LPIN1-207ENST00000425416 PRM3Q9NNZ6 103 aa12.07□□□□□ -0.48
LPIN1-207ENST00000425416 AMER1Q5JTC6 1135 aaPredicted RBP12.07□□□□□ -0.48
LPIN1-207ENST00000425416 HMMRO75330 724 aa12.06□□□□□ -0.48
LPIN1-207ENST00000425416 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
LPIN1-207ENST00000425416 MTUS2Q5JR59 1369 aa12.06□□□□□ -0.48
LPIN1-207ENST00000425416 HDGFP51858 240 aaKnown RBP12.06□□□□□ -0.48
LPIN1-207ENST00000425416 CDR1P51861 262 aa12.05□□□□□ -0.48
LPIN1-207ENST00000425416 CHMP4AQ9BY43 222 aa12.05□□□□□ -0.48
LPIN1-207ENST00000425416 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
LPIN1-207ENST00000425416 PLEKHD1A6NEE1 506 aa12.04□□□□□ -0.48
LPIN1-207ENST00000425416 OS9Q13438 667 aaPredicted RBP12.04□□□□□ -0.48
LPIN1-207ENST00000425416 TEX35Q5T0J7 233 aa12.03□□□□□ -0.48
LPIN1-207ENST00000425416 BAZ1BQ9UIG0 1483 aaKnown RBP12.03□□□□□ -0.48
LPIN1-207ENST00000425416 HSP90B1P14625 803 aaKnown RBP12.03□□□□□ -0.48
LPIN1-207ENST00000425416 SALL2Q9Y467 1007 aaPredicted RBP12.03□□□□□ -0.48
LPIN1-207ENST00000425416 CALD1Q05682 793 aaKnown RBP12.02□□□□□ -0.49
LPIN1-207ENST00000425416 PLPPR3Q6T4P5 718 aa12.01□□□□□ -0.49
LPIN1-207ENST00000425416 KIF27Q86VH2 1401 aa12□□□□□ -0.49
LPIN1-207ENST00000425416 DEKP35659 375 aaKnown RBP12□□□□□ -0.49
LPIN1-207ENST00000425416 ACBD3Q9H3P7 528 aa11.98□□□□□ -0.49
LPIN1-207ENST00000425416 NAP1L2Q9ULW6 460 aaPredicted RBP11.98□□□□□ -0.49
LPIN1-207ENST00000425416 HDAC5Q9UQL6 1122 aa11.98□□□□□ -0.49
LPIN1-207ENST00000425416 KIF3AQ9Y496 699 aa11.98□□□□□ -0.49
LPIN1-207ENST00000425416 TPM2P07951 284 aa11.97□□□□□ -0.49
LPIN1-207ENST00000425416 HSP90AA2PQ14568 343 aaPredicted RBP11.97□□□□□ -0.49
LPIN1-207ENST00000425416 KIAA1211Q6ZU35 1233 aa11.97□□□□□ -0.49
LPIN1-207ENST00000425416 KNSTRNQ9Y448 316 aa11.97□□□□□ -0.49
LPIN1-207ENST00000425416 ERCC6Q03468 1493 aa11.97□□□□□ -0.49
LPIN1-207ENST00000425416 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
LPIN1-207ENST00000425416 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
LPIN1-207ENST00000425416 TSR1Q2NL82 804 aaKnown RBP11.96□□□□□ -0.49
LPIN1-207ENST00000425416 PPP1R15AO75807 674 aaPredicted RBP11.96□□□□□ -0.5
LPIN1-207ENST00000425416 BAZ1AQ9NRL2 1556 aaPredicted RBP11.96□□□□□ -0.5
LPIN1-207ENST00000425416 NPHP1O15259 732 aa11.95□□□□□ -0.5
LPIN1-207ENST00000425416 TPM1P09493 284 aa11.95□□□□□ -0.5
LPIN1-207ENST00000425416 P3H3Q8IVL6 736 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms