RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CEP170Q5SW79 1584 aa15.97■□□□□ 0.15
NUP50-206ENST00000422489 ERCC6L2Q5T890 1561 aa15.93■□□□□ 0.14
NUP50-206ENST00000422489 PRG4Q92954 1404 aaPredicted RBP15.93■□□□□ 0.14
NUP50-206ENST00000422489 CARMIL1Q5VZK9 1371 aa15.88■□□□□ 0.13
NUP50-206ENST00000422489 TTBK1Q5TCY1 1321 aaPredicted RBP15.85■□□□□ 0.13
NUP50-206ENST00000422489 NPM1P06748 294 aaKnown RBP eCLIP15.83■□□□□ 0.12
NUP50-206ENST00000422489 SHROOM2Q13796 1616 aa15.83■□□□□ 0.12
NUP50-206ENST00000422489 KIAA0586Q9BVV6 1533 aa15.82■□□□□ 0.12
NUP50-206ENST00000422489 CUL7Q14999 1698 aa15.78■□□□□ 0.12
NUP50-206ENST00000422489 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
NUP50-206ENST00000422489 PTPRGP23470 1445 aa15.72■□□□□ 0.11
NUP50-206ENST00000422489 RAPGEF2Q9Y4G8 1499 aa15.71■□□□□ 0.1
NUP50-206ENST00000422489 CARMIL2Q6F5E8 1435 aa15.7■□□□□ 0.1
NUP50-206ENST00000422489 FAM69CQ0P6D2 419 aa15.7■□□□□ 0.1
NUP50-206ENST00000422489 TNIKQ9UKE5 1360 aa15.67■□□□□ 0.1
NUP50-206ENST00000422489 IQGAP2Q13576 1575 aa15.63■□□□□ 0.09
NUP50-206ENST00000422489 CSRNP3Q8WYN3 585 aa15.61■□□□□ 0.09
NUP50-206ENST00000422489 FAM9AQ8IZU1 332 aaPredicted RBP15.6■□□□□ 0.09
NUP50-206ENST00000422489 ADCY10Q96PN6 1610 aa15.6■□□□□ 0.09
NUP50-206ENST00000422489 ABCC10Q5T3U5 1492 aa15.58■□□□□ 0.08
NUP50-206ENST00000422489 DISP1Q96F81 1524 aa15.58■□□□□ 0.08
NUP50-206ENST00000422489 UACAQ9BZF9 1416 aa15.57■□□□□ 0.08
NUP50-206ENST00000422489 P3H3Q8IVL6 736 aa15.56■□□□□ 0.08
NUP50-206ENST00000422489 MAPKBP1O60336 1514 aa15.55■□□□□ 0.08
NUP50-206ENST00000422489 PRXQ9BXM0 1461 aa15.55■□□□□ 0.08
NUP50-206ENST00000422489 UGGT2Q9NYU1 1516 aa15.54■□□□□ 0.08
NUP50-206ENST00000422489 RANGAP1P46060 587 aaPredicted RBP15.53■□□□□ 0.08
NUP50-206ENST00000422489 ABCC2Q92887 1545 aa15.52■□□□□ 0.07
NUP50-206ENST00000422489 UHRF1BP1LA0JNW5 1464 aa15.5■□□□□ 0.07
NUP50-206ENST00000422489 ASXL2Q76L83 1435 aa15.5■□□□□ 0.07
NUP50-206ENST00000422489 GOLGA3Q08378 1498 aa15.49■□□□□ 0.07
NUP50-206ENST00000422489 KIF13AQ9H1H9 1805 aa15.48■□□□□ 0.07
NUP50-206ENST00000422489 EHMT2Q96KQ7 1210 aa15.48■□□□□ 0.07
NUP50-206ENST00000422489 PLB1Q6P1J6 1458 aa15.47■□□□□ 0.07
NUP50-206ENST00000422489 KIAA0556O60303 1618 aa15.47■□□□□ 0.07
NUP50-206ENST00000422489 DIP2BQ9P265 1576 aa15.47■□□□□ 0.07
NUP50-206ENST00000422489 ARID3CA6NKF2 412 aa15.46■□□□□ 0.07
NUP50-206ENST00000422489 KCNH8Q96L42 1107 aa15.46■□□□□ 0.07
NUP50-206ENST00000422489 EEA1Q15075 1411 aa15.44■□□□□ 0.06
NUP50-206ENST00000422489 KDM5BQ9UGL1 1544 aa15.43■□□□□ 0.06
NUP50-206ENST00000422489 CTTNBP2Q8WZ74 1663 aa15.41■□□□□ 0.06
NUP50-206ENST00000422489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
NUP50-206ENST00000422489 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
NUP50-206ENST00000422489 UBTFP17480 764 aaKnown RBP15.38■□□□□ 0.05
NUP50-206ENST00000422489 EPRSP07814 1512 aaKnown RBP15.38■□□□□ 0.05
NUP50-206ENST00000422489 TSPOAP1O95153 1857 aa15.36■□□□□ 0.05
NUP50-206ENST00000422489 ZCCHC11Q5TAX3 1644 aaKnown RBP15.35■□□□□ 0.05
NUP50-206ENST00000422489 GLI2P10070 1586 aa15.35■□□□□ 0.05
NUP50-206ENST00000422489 KDM6BO15054 1643 aa15.35■□□□□ 0.05
NUP50-206ENST00000422489 ABCA8O94911 1581 aa15.34■□□□□ 0.05
NUP50-206ENST00000422489 WDR7Q9Y4E6 1490 aa15.33■□□□□ 0.04
NUP50-206ENST00000422489 ATP10BO94823 1461 aa15.3■□□□□ 0.04
NUP50-206ENST00000422489 FHOD3Q2V2M9 1422 aa15.29■□□□□ 0.04
NUP50-206ENST00000422489 CD109Q6YHK3 1445 aa15.29■□□□□ 0.04
NUP50-206ENST00000422489 ATP1B4Q9UN42 357 aaPredicted RBP15.28■□□□□ 0.04
NUP50-206ENST00000422489 TEX14Q8IWB6 1497 aa15.27■□□□□ 0.04
NUP50-206ENST00000422489 COL17A1Q9UMD9 1497 aaPredicted RBP15.26■□□□□ 0.03
NUP50-206ENST00000422489 SAMD9Q5K651 1589 aa15.25■□□□□ 0.03
NUP50-206ENST00000422489 PLEKHD1A6NEE1 506 aa15.25■□□□□ 0.03
NUP50-206ENST00000422489 KDM4FA0A1W2PPD8 638 aa15.24■□□□□ 0.03
NUP50-206ENST00000422489 PPRC1Q5VV67 1664 aaKnown RBP15.23■□□□□ 0.03
NUP50-206ENST00000422489 KIF21BO75037 1637 aa15.23■□□□□ 0.03
NUP50-206ENST00000422489 MAP3K4Q9Y6R4 1608 aa15.23■□□□□ 0.03
NUP50-206ENST00000422489 RAPGEF6Q8TEU7 1601 aa15.2■□□□□ 0.02
NUP50-206ENST00000422489 MAGI3Q5TCQ9 1506 aa15.19■□□□□ 0.02
NUP50-206ENST00000422489 NUP153P49790 1475 aaKnown RBP15.18■□□□□ 0.02
NUP50-206ENST00000422489 FOXD1Q16676 465 aa15.17■□□□□ 0.02
NUP50-206ENST00000422489 EFCAB5A4FU69 1503 aa15.16■□□□□ 0.02
NUP50-206ENST00000422489 CFAP43Q8NDM7 1665 aa15.14■□□□□ 0.01
NUP50-206ENST00000422489 RAPGEF3O95398 923 aa15.14■□□□□ 0.01
NUP50-206ENST00000422489 PHLDB1Q86UU1 1377 aa15.11■□□□□ 0.01
NUP50-206ENST00000422489 FMN1Q68DA7 1419 aa15.1■□□□□ 0.01
NUP50-206ENST00000422489 ARHGAP35Q9NRY4 1499 aa15.1■□□□□ 0.01
NUP50-206ENST00000422489 CDK11AQ9UQ88 783 aaPredicted RBP15.1■□□□□ 0.01
NUP50-206ENST00000422489 ADGRL1O94910 1474 aa15.08■□□□□ 0.01
NUP50-206ENST00000422489 ABCA9Q8IUA7 1624 aa15.07■□□□□ 0
NUP50-206ENST00000422489 CDK13Q14004 1512 aaKnown RBP15.07■□□□□ 0
NUP50-206ENST00000422489 ARAP3Q8WWN8 1544 aa15.07■□□□□ 0
NUP50-206ENST00000422489 NEO1Q92859 1461 aa15.05■□□□□ -0
NUP50-206ENST00000422489 ARID4BQ4LE39 1312 aaPredicted RBP15.04■□□□□ -0
NUP50-206ENST00000422489 AKNAQ7Z591 1439 aa15.03■□□□□ -0
NUP50-206ENST00000422489 EFCAB2Q5VUJ9 269 aa15.01□□□□□ -0.01
NUP50-206ENST00000422489 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.01□□□□□ -0.01
NUP50-206ENST00000422489 FANCAO15360 1455 aa15□□□□□ -0.01
NUP50-206ENST00000422489 DENND4BO75064 1496 aaPredicted RBP15□□□□□ -0.01
NUP50-206ENST00000422489 HECW1Q76N89 1606 aa14.99□□□□□ -0.01
NUP50-206ENST00000422489 CLIP1P30622 1438 aa14.98□□□□□ -0.01
NUP50-206ENST00000422489 PLCH2O75038 1416 aa14.97□□□□□ -0.01
NUP50-206ENST00000422489 MYT1LQ9UL68 1186 aa14.96□□□□□ -0.01
NUP50-206ENST00000422489 TROQ12816 1431 aaPredicted RBP14.95□□□□□ -0.02
NUP50-206ENST00000422489 SCAPERQ9BY12 1400 aa14.95□□□□□ -0.02
NUP50-206ENST00000422489 TTC37Q6PGP7 1564 aa14.94□□□□□ -0.02
NUP50-206ENST00000422489 CASKIN1Q8WXD9 1431 aa14.94□□□□□ -0.02
NUP50-206ENST00000422489 MLECQ14165 292 aa14.92□□□□□ -0.02
NUP50-206ENST00000422489 PLPPR3Q6T4P5 718 aa14.92□□□□□ -0.02
NUP50-206ENST00000422489 LOC105371045A0A1W2PR82 267 aa14.91□□□□□ -0.02
NUP50-206ENST00000422489 AFAP1Q8N556 730 aa14.91□□□□□ -0.02
NUP50-206ENST00000422489 ZNF777Q9ULD5 760 aaPredicted RBP14.89□□□□□ -0.03
NUP50-206ENST00000422489 FRMPD1Q5SYB0 1578 aa14.89□□□□□ -0.03
NUP50-206ENST00000422489 CFAP74Q9C0B2 1584 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms