RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 ERICH3Q5RHP9 1530 aa14.37□□□□□ -0.11
TRIM43CP-201ENST00000422468 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
TRIM43CP-201ENST00000422468 CEP170Q5SW79 1584 aa14.33□□□□□ -0.12
TRIM43CP-201ENST00000422468 NUP160Q12769 1436 aa14.32□□□□□ -0.12
TRIM43CP-201ENST00000422468 SHROOM2Q13796 1616 aa14.28□□□□□ -0.12
TRIM43CP-201ENST00000422468 ERCC6L2Q5T890 1561 aa14.26□□□□□ -0.13
TRIM43CP-201ENST00000422468 TRHP20396 242 aaPredicted RBP14.24□□□□□ -0.13
TRIM43CP-201ENST00000422468 KIF27Q86VH2 1401 aa14.23□□□□□ -0.13
TRIM43CP-201ENST00000422468 CUL7Q14999 1698 aa14.21□□□□□ -0.13
TRIM43CP-201ENST00000422468 IGF1RP08069 1367 aa14.2□□□□□ -0.14
TRIM43CP-201ENST00000422468 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
TRIM43CP-201ENST00000422468 PRG4Q92954 1404 aaPredicted RBP14.16□□□□□ -0.14
TRIM43CP-201ENST00000422468 JPH4Q96JJ6 628 aa14.16□□□□□ -0.14
TRIM43CP-201ENST00000422468 KIAA0586Q9BVV6 1533 aa14.12□□□□□ -0.15
TRIM43CP-201ENST00000422468 PPP4R3CPQ6ZMV5 832 aa14.12□□□□□ -0.15
TRIM43CP-201ENST00000422468 KCNA4P22459 653 aa14.11□□□□□ -0.15
TRIM43CP-201ENST00000422468 CARMIL1Q5VZK9 1371 aa14.1□□□□□ -0.15
TRIM43CP-201ENST00000422468 KIF13AQ9H1H9 1805 aa14.02□□□□□ -0.16
TRIM43CP-201ENST00000422468 IQGAP2Q13576 1575 aa14.02□□□□□ -0.16
TRIM43CP-201ENST00000422468 ADCY10Q96PN6 1610 aa14.01□□□□□ -0.17
TRIM43CP-201ENST00000422468 RAPGEF2Q9Y4G8 1499 aa14□□□□□ -0.17
TRIM43CP-201ENST00000422468 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
TRIM43CP-201ENST00000422468 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRIM43CP-201ENST00000422468 MAPKBP1O60336 1514 aa13.97□□□□□ -0.17
TRIM43CP-201ENST00000422468 PTPRGP23470 1445 aa13.97□□□□□ -0.17
TRIM43CP-201ENST00000422468 TNIKQ9UKE5 1360 aa13.95□□□□□ -0.18
TRIM43CP-201ENST00000422468 ABCC10Q5T3U5 1492 aa13.93□□□□□ -0.18
TRIM43CP-201ENST00000422468 CTTNBP2Q8WZ74 1663 aa13.93□□□□□ -0.18
TRIM43CP-201ENST00000422468 DISP1Q96F81 1524 aa13.93□□□□□ -0.18
TRIM43CP-201ENST00000422468 UGGT2Q9NYU1 1516 aa13.93□□□□□ -0.18
TRIM43CP-201ENST00000422468 DIP2BQ9P265 1576 aa13.92□□□□□ -0.18
TRIM43CP-201ENST00000422468 TTBK1Q5TCY1 1321 aaPredicted RBP13.9□□□□□ -0.19
TRIM43CP-201ENST00000422468 FAM69CQ0P6D2 419 aa13.89□□□□□ -0.19
TRIM43CP-201ENST00000422468 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
TRIM43CP-201ENST00000422468 KIAA0556O60303 1618 aa13.89□□□□□ -0.19
TRIM43CP-201ENST00000422468 UHRF1BP1LA0JNW5 1464 aa13.88□□□□□ -0.19
TRIM43CP-201ENST00000422468 PRXQ9BXM0 1461 aa13.88□□□□□ -0.19
TRIM43CP-201ENST00000422468 ABCC2Q92887 1545 aa13.88□□□□□ -0.19
TRIM43CP-201ENST00000422468 UACAQ9BZF9 1416 aa13.86□□□□□ -0.19
TRIM43CP-201ENST00000422468 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
TRIM43CP-201ENST00000422468 TSPOAP1O95153 1857 aa13.84□□□□□ -0.19
TRIM43CP-201ENST00000422468 GOLGA3Q08378 1498 aa13.83□□□□□ -0.2
TRIM43CP-201ENST00000422468 PLB1Q6P1J6 1458 aa13.82□□□□□ -0.2
TRIM43CP-201ENST00000422468 ASXL2Q76L83 1435 aa13.81□□□□□ -0.2
TRIM43CP-201ENST00000422468 KDM5BQ9UGL1 1544 aa13.8□□□□□ -0.2
TRIM43CP-201ENST00000422468 ZCCHC11Q5TAX3 1644 aaKnown RBP13.8□□□□□ -0.2
TRIM43CP-201ENST00000422468 GLI2P10070 1586 aa13.79□□□□□ -0.2
TRIM43CP-201ENST00000422468 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
TRIM43CP-201ENST00000422468 EEA1Q15075 1411 aa13.78□□□□□ -0.2
TRIM43CP-201ENST00000422468 KDM6BO15054 1643 aa13.76□□□□□ -0.21
TRIM43CP-201ENST00000422468 PPRC1Q5VV67 1664 aaKnown RBP13.75□□□□□ -0.21
TRIM43CP-201ENST00000422468 ABCA8O94911 1581 aa13.75□□□□□ -0.21
TRIM43CP-201ENST00000422468 EPRSP07814 1512 aaKnown RBP13.74□□□□□ -0.21
TRIM43CP-201ENST00000422468 MAP3K4Q9Y6R4 1608 aa13.73□□□□□ -0.21
TRIM43CP-201ENST00000422468 SAMD9Q5K651 1589 aa13.71□□□□□ -0.21
TRIM43CP-201ENST00000422468 FAM9AQ8IZU1 332 aaPredicted RBP13.71□□□□□ -0.21
TRIM43CP-201ENST00000422468 WDR7Q9Y4E6 1490 aa13.71□□□□□ -0.21
TRIM43CP-201ENST00000422468 KIF21BO75037 1637 aa13.68□□□□□ -0.22
TRIM43CP-201ENST00000422468 P3H3Q8IVL6 736 aa13.67□□□□□ -0.22
TRIM43CP-201ENST00000422468 TEX14Q8IWB6 1497 aa13.67□□□□□ -0.22
TRIM43CP-201ENST00000422468 CFAP43Q8NDM7 1665 aa13.66□□□□□ -0.22
TRIM43CP-201ENST00000422468 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
TRIM43CP-201ENST00000422468 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
TRIM43CP-201ENST00000422468 ATP10BO94823 1461 aa13.62□□□□□ -0.23
TRIM43CP-201ENST00000422468 KCNH8Q96L42 1107 aa13.61□□□□□ -0.23
TRIM43CP-201ENST00000422468 EFCAB5A4FU69 1503 aa13.6□□□□□ -0.23
TRIM43CP-201ENST00000422468 MAGI3Q5TCQ9 1506 aa13.6□□□□□ -0.23
TRIM43CP-201ENST00000422468 MAPK8IP2Q13387 824 aaPredicted RBP13.6□□□□□ -0.23
TRIM43CP-201ENST00000422468 CD109Q6YHK3 1445 aa13.6□□□□□ -0.23
TRIM43CP-201ENST00000422468 COL17A1Q9UMD9 1497 aaPredicted RBP13.6□□□□□ -0.23
TRIM43CP-201ENST00000422468 ARID3CA6NKF2 412 aa13.59□□□□□ -0.23
TRIM43CP-201ENST00000422468 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
TRIM43CP-201ENST00000422468 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
TRIM43CP-201ENST00000422468 FHOD3Q2V2M9 1422 aa13.58□□□□□ -0.24
TRIM43CP-201ENST00000422468 NUP153P49790 1475 aaKnown RBP13.56□□□□□ -0.24
TRIM43CP-201ENST00000422468 EHMT2Q96KQ7 1210 aa13.56□□□□□ -0.24
TRIM43CP-201ENST00000422468 ABCA9Q8IUA7 1624 aa13.56□□□□□ -0.24
TRIM43CP-201ENST00000422468 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
TRIM43CP-201ENST00000422468 KDM4FA0A1W2PPD8 638 aa13.54□□□□□ -0.24
TRIM43CP-201ENST00000422468 UBTFP17480 764 aaKnown RBP13.53□□□□□ -0.24
TRIM43CP-201ENST00000422468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
TRIM43CP-201ENST00000422468 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
TRIM43CP-201ENST00000422468 ARHGAP35Q9NRY4 1499 aa13.5□□□□□ -0.25
TRIM43CP-201ENST00000422468 ARAP3Q8WWN8 1544 aa13.49□□□□□ -0.25
TRIM43CP-201ENST00000422468 ADGRL1O94910 1474 aa13.48□□□□□ -0.25
TRIM43CP-201ENST00000422468 PHLDB1Q86UU1 1377 aa13.48□□□□□ -0.25
TRIM43CP-201ENST00000422468 PLEKHD1A6NEE1 506 aa13.48□□□□□ -0.25
TRIM43CP-201ENST00000422468 LRRIQ1Q96JM4 1722 aa13.47□□□□□ -0.25
TRIM43CP-201ENST00000422468 NEO1Q92859 1461 aa13.46□□□□□ -0.25
TRIM43CP-201ENST00000422468 FMN1Q68DA7 1419 aa13.46□□□□□ -0.26
TRIM43CP-201ENST00000422468 HECW1Q76N89 1606 aa13.45□□□□□ -0.26
TRIM43CP-201ENST00000422468 CDK13Q14004 1512 aaKnown RBP13.44□□□□□ -0.26
TRIM43CP-201ENST00000422468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRIM43CP-201ENST00000422468 CFAP74Q9C0B2 1584 aa13.42□□□□□ -0.26
TRIM43CP-201ENST00000422468 TTC37Q6PGP7 1564 aa13.41□□□□□ -0.26
TRIM43CP-201ENST00000422468 FRMPD1Q5SYB0 1578 aa13.4□□□□□ -0.26
TRIM43CP-201ENST00000422468 ATP1B4Q9UN42 357 aaPredicted RBP13.39□□□□□ -0.27
TRIM43CP-201ENST00000422468 FANCAO15360 1455 aa13.38□□□□□ -0.27
TRIM43CP-201ENST00000422468 RAPGEF3O95398 923 aa13.38□□□□□ -0.27
TRIM43CP-201ENST00000422468 RICTORQ6R327 1708 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms