RNA–Protein interactions for RNA: ENST00000422091.1

ARHGAP4-208, Transcript of Rho GTPase activating protein 4, human

TSL 4

Gene ARHGAP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-208	ENST00000422091	CARMIL1	Q5VZK9	1371 aa		34.22	■■■■□ 3.07
ARHGAP4-208	ENST00000422091	PRG4	Q92954	1404 aa	Predicted RBP	34.15	■■■■□ 3.06
ARHGAP4-208	ENST00000422091	JPH4	Q96JJ6	628 aa		34.12	■■■■□ 3.05
ARHGAP4-208	ENST00000422091	KIAA0586	Q9BVV6	1533 aa		34.09	■■■■□ 3.05
ARHGAP4-208	ENST00000422091	RAPGEF2	Q9Y4G8	1499 aa		34.02	■■■■□ 3.04
ARHGAP4-208	ENST00000422091	IQGAP2	Q13576	1575 aa		33.88	■■■■□ 3.01
ARHGAP4-208	ENST00000422091	EEA1	Q15075	1411 aa		33.86	■■■■□ 3.01
ARHGAP4-208	ENST00000422091	CARMIL2	Q6F5E8	1435 aa		33.81	■■■■□ 3
ARHGAP4-208	ENST00000422091	PRX	Q9BXM0	1461 aa		33.8	■■■■□ 3
ARHGAP4-208	ENST00000422091	CSRNP3	Q8WYN3	585 aa		33.75	■■■□□ 2.99
ARHGAP4-208	ENST00000422091	ADCY10	Q96PN6	1610 aa		33.71	■■■□□ 2.99
ARHGAP4-208	ENST00000422091	CTTNBP2	Q8WZ74	1663 aa		33.71	■■■□□ 2.99
ARHGAP4-208	ENST00000422091	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.69	■■■□□ 2.98
ARHGAP4-208	ENST00000422091	CHIC1	Q5VXU3	224 aa		33.68	■■■□□ 2.98
ARHGAP4-208	ENST00000422091	UGGT2	Q9NYU1	1516 aa		33.68	■■■□□ 2.98
ARHGAP4-208	ENST00000422091	PTPRG	P23470	1445 aa		33.66	■■■□□ 2.98
ARHGAP4-208	ENST00000422091	TNIK	Q9UKE5	1360 aa		33.66	■■■□□ 2.98
ARHGAP4-208	ENST00000422091	NPM1	P06748	294 aa	Known RBP eCLIP	33.65	■■■□□ 2.98
ARHGAP4-208	ENST00000422091	DISP1	Q96F81	1524 aa		33.6	■■■□□ 2.97
ARHGAP4-208	ENST00000422091	KIF13A	Q9H1H9	1805 aa		33.57	■■■□□ 2.96
ARHGAP4-208	ENST00000422091	MAPKBP1	O60336	1514 aa		33.57	■■■□□ 2.96
ARHGAP4-208	ENST00000422091	GOLGA3	Q08378	1498 aa		33.56	■■■□□ 2.96
ARHGAP4-208	ENST00000422091	KIAA0556	O60303	1618 aa		33.53	■■■□□ 2.96
ARHGAP4-208	ENST00000422091	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.49	■■■□□ 2.95
ARHGAP4-208	ENST00000422091	ABCC10	Q5T3U5	1492 aa		33.48	■■■□□ 2.95
ARHGAP4-208	ENST00000422091	FAM69C	Q0P6D2	419 aa		33.45	■■■□□ 2.95
ARHGAP4-208	ENST00000422091	KIF21B	O75037	1637 aa		33.44	■■■□□ 2.94
ARHGAP4-208	ENST00000422091	ABCC2	Q92887	1545 aa		33.43	■■■□□ 2.94
ARHGAP4-208	ENST00000422091	DIP2B	Q9P265	1576 aa		33.43	■■■□□ 2.94
ARHGAP4-208	ENST00000422091	UACA	Q9BZF9	1416 aa		33.41	■■■□□ 2.94
ARHGAP4-208	ENST00000422091	UHRF1BP1L	A0JNW5	1464 aa		33.4	■■■□□ 2.94
ARHGAP4-208	ENST00000422091	ASXL2	Q76L83	1435 aa		33.28	■■■□□ 2.92
ARHGAP4-208	ENST00000422091	KDM5B	Q9UGL1	1544 aa		33.24	■■■□□ 2.91
ARHGAP4-208	ENST00000422091	PLB1	Q6P1J6	1458 aa		33.24	■■■□□ 2.91
ARHGAP4-208	ENST00000422091	SAMD9	Q5K651	1589 aa		33.23	■■■□□ 2.91
ARHGAP4-208	ENST00000422091	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.23	■■■□□ 2.91
ARHGAP4-208	ENST00000422091	TSPOAP1	O95153	1857 aa		33.2	■■■□□ 2.91
ARHGAP4-208	ENST00000422091	ABCA8	O94911	1581 aa		33.17	■■■□□ 2.9
ARHGAP4-208	ENST00000422091	UBTF	P17480	764 aa	Known RBP	33.16	■■■□□ 2.9
ARHGAP4-208	ENST00000422091	P3H3	Q8IVL6	736 aa		33.15	■■■□□ 2.9
ARHGAP4-208	ENST00000422091	EFCAB5	A4FU69	1503 aa		33.13	■■■□□ 2.89
ARHGAP4-208	ENST00000422091	GLI2	P10070	1586 aa		33.11	■■■□□ 2.89
ARHGAP4-208	ENST00000422091	RANGAP1	P46060	587 aa	Predicted RBP	33.08	■■■□□ 2.89
ARHGAP4-208	ENST00000422091	EPRS	P07814	1512 aa	Known RBP	33.07	■■■□□ 2.89
ARHGAP4-208	ENST00000422091	KDM6B	O15054	1643 aa		33.06	■■■□□ 2.88
ARHGAP4-208	ENST00000422091	WDR7	Q9Y4E6	1490 aa		33.04	■■■□□ 2.88
ARHGAP4-208	ENST00000422091	EHMT2	Q96KQ7	1210 aa		33.01	■■■□□ 2.87
ARHGAP4-208	ENST00000422091	PPRC1	Q5VV67	1664 aa	Known RBP	33	■■■□□ 2.87
ARHGAP4-208	ENST00000422091	RAPGEF6	Q8TEU7	1601 aa		32.99	■■■□□ 2.87
ARHGAP4-208	ENST00000422091	FHOD3	Q2V2M9	1422 aa		32.98	■■■□□ 2.87
ARHGAP4-208	ENST00000422091	MAP3K4	Q9Y6R4	1608 aa		32.98	■■■□□ 2.87
ARHGAP4-208	ENST00000422091	ARID3C	A6NKF2	412 aa		32.96	■■■□□ 2.87
ARHGAP4-208	ENST00000422091	KCNH8	Q96L42	1107 aa		32.88	■■■□□ 2.85
ARHGAP4-208	ENST00000422091	ATP10B	O94823	1461 aa		32.87	■■■□□ 2.85
ARHGAP4-208	ENST00000422091	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.87	■■■□□ 2.85
ARHGAP4-208	ENST00000422091	TEX14	Q8IWB6	1497 aa		32.85	■■■□□ 2.85
ARHGAP4-208	ENST00000422091	FMN1	Q68DA7	1419 aa		32.84	■■■□□ 2.85
ARHGAP4-208	ENST00000422091	NUP153	P49790	1475 aa	Known RBP	32.81	■■■□□ 2.84
ARHGAP4-208	ENST00000422091	ARHGAP35	Q9NRY4	1499 aa		32.81	■■■□□ 2.84
ARHGAP4-208	ENST00000422091	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.8	■■■□□ 2.84
ARHGAP4-208	ENST00000422091	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.8	■■■□□ 2.84
ARHGAP4-208	ENST00000422091	CFAP43	Q8NDM7	1665 aa		32.79	■■■□□ 2.84
ARHGAP4-208	ENST00000422091	CD109	Q6YHK3	1445 aa		32.77	■■■□□ 2.84
ARHGAP4-208	ENST00000422091	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.73	■■■□□ 2.83
ARHGAP4-208	ENST00000422091	MAGI3	Q5TCQ9	1506 aa		32.71	■■■□□ 2.83
ARHGAP4-208	ENST00000422091	HECW1	Q76N89	1606 aa		32.67	■■■□□ 2.82
ARHGAP4-208	ENST00000422091	PLEKHD1	A6NEE1	506 aa		32.67	■■■□□ 2.82
ARHGAP4-208	ENST00000422091	ABCA9	Q8IUA7	1624 aa		32.62	■■■□□ 2.81
ARHGAP4-208	ENST00000422091	CLIP1	P30622	1438 aa		32.6	■■■□□ 2.81
ARHGAP4-208	ENST00000422091	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.6	■■■□□ 2.81
ARHGAP4-208	ENST00000422091	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.56	■■■□□ 2.8
ARHGAP4-208	ENST00000422091	CDK13	Q14004	1512 aa	Known RBP	32.53	■■■□□ 2.8
ARHGAP4-208	ENST00000422091	PHLDB1	Q86UU1	1377 aa		32.5	■■■□□ 2.79
ARHGAP4-208	ENST00000422091	CASKIN1	Q8WXD9	1431 aa		32.5	■■■□□ 2.79
ARHGAP4-208	ENST00000422091	KDM4F	A0A1W2PPD8	638 aa		32.49	■■■□□ 2.79
ARHGAP4-208	ENST00000422091	CCDC18	Q5T9S5	1454 aa		32.46	■■■□□ 2.79
ARHGAP4-208	ENST00000422091	ARAP3	Q8WWN8	1544 aa		32.44	■■■□□ 2.78
ARHGAP4-208	ENST00000422091	FYCO1	Q9BQS8	1478 aa		32.43	■■■□□ 2.78
ARHGAP4-208	ENST00000422091	PCF11	O94913	1555 aa	Known RBP	32.43	■■■□□ 2.78
ARHGAP4-208	ENST00000422091	NEO1	Q92859	1461 aa		32.41	■■■□□ 2.78
ARHGAP4-208	ENST00000422091	CEP162	Q5TB80	1403 aa		32.39	■■■□□ 2.78
ARHGAP4-208	ENST00000422091	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.39	■■■□□ 2.78
ARHGAP4-208	ENST00000422091	ADGRL1	O94910	1474 aa		32.38	■■■□□ 2.77
ARHGAP4-208	ENST00000422091	TTC37	Q6PGP7	1564 aa		32.37	■■■□□ 2.77
ARHGAP4-208	ENST00000422091	TRO	Q12816	1431 aa	Predicted RBP	32.35	■■■□□ 2.77
ARHGAP4-208	ENST00000422091	CFAP74	Q9C0B2	1584 aa		32.35	■■■□□ 2.77
ARHGAP4-208	ENST00000422091	LRRIQ1	Q96JM4	1722 aa		32.34	■■■□□ 2.77
ARHGAP4-208	ENST00000422091	KIF14	Q15058	1648 aa		32.33	■■■□□ 2.77
ARHGAP4-208	ENST00000422091	RAPGEF3	O95398	923 aa		32.29	■■■□□ 2.76
ARHGAP4-208	ENST00000422091	FANCA	O15360	1455 aa		32.28	■■■□□ 2.76
ARHGAP4-208	ENST00000422091	FRMPD1	Q5SYB0	1578 aa		32.25	■■■□□ 2.75
ARHGAP4-208	ENST00000422091	LOC105371045	A0A1W2PR82	267 aa		32.24	■■■□□ 2.75
ARHGAP4-208	ENST00000422091	PLCH2	O75038	1416 aa		32.24	■■■□□ 2.75
ARHGAP4-208	ENST00000422091	MYO5C	Q9NQX4	1742 aa		32.23	■■■□□ 2.75
ARHGAP4-208	ENST00000422091	AKNA	Q7Z591	1439 aa		32.23	■■■□□ 2.75
ARHGAP4-208	ENST00000422091	DENND4B	O75064	1496 aa	Predicted RBP	32.18	■■■□□ 2.74
ARHGAP4-208	ENST00000422091	EFCAB2	Q5VUJ9	269 aa		32.16	■■■□□ 2.74
ARHGAP4-208	ENST00000422091	RICTOR	Q6R327	1708 aa		32.15	■■■□□ 2.74
ARHGAP4-208	ENST00000422091	ARHGAP5	Q13017	1502 aa		32.1	■■■□□ 2.73
ARHGAP4-208	ENST00000422091	MTUS2	Q5JR59	1369 aa		32.07	■■■□□ 2.73

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