RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 RUSC2Q8N2Y8 1516 aa30.84■■■□□ 2.53
UBXN11-208ENST00000421827 PRG4Q92954 1404 aaPredicted RBP30.81■■■□□ 2.52
UBXN11-208ENST00000421827 KIAA0586Q9BVV6 1533 aa30.78■■■□□ 2.52
UBXN11-208ENST00000421827 TRHP20396 242 aaPredicted RBP30.72■■■□□ 2.51
UBXN11-208ENST00000421827 RAPGEF2Q9Y4G8 1499 aa30.64■■■□□ 2.5
UBXN11-208ENST00000421827 IQGAP2Q13576 1575 aa30.54■■■□□ 2.48
UBXN11-208ENST00000421827 CARMIL2Q6F5E8 1435 aa30.47■■■□□ 2.47
UBXN11-208ENST00000421827 PRXQ9BXM0 1461 aa30.45■■■□□ 2.47
UBXN11-208ENST00000421827 PTPRGP23470 1445 aa30.41■■■□□ 2.46
UBXN11-208ENST00000421827 TNIKQ9UKE5 1360 aa30.4■■■□□ 2.46
UBXN11-208ENST00000421827 NPM1P06748 294 aaKnown RBP eCLIP30.38■■■□□ 2.45
UBXN11-208ENST00000421827 UGGT2Q9NYU1 1516 aa30.37■■■□□ 2.45
UBXN11-208ENST00000421827 CSRNP3Q8WYN3 585 aa30.37■■■□□ 2.45
UBXN11-208ENST00000421827 DISP1Q96F81 1524 aa30.37■■■□□ 2.45
UBXN11-208ENST00000421827 ADCY10Q96PN6 1610 aa30.36■■■□□ 2.45
UBXN11-208ENST00000421827 TTBK1Q5TCY1 1321 aaPredicted RBP30.35■■■□□ 2.45
UBXN11-208ENST00000421827 EEA1Q15075 1411 aa30.31■■■□□ 2.44
UBXN11-208ENST00000421827 CTTNBP2Q8WZ74 1663 aa30.31■■■□□ 2.44
UBXN11-208ENST00000421827 CHIC1Q5VXU3 224 aa30.26■■■□□ 2.43
UBXN11-208ENST00000421827 KIAA0556O60303 1618 aa30.25■■■□□ 2.43
UBXN11-208ENST00000421827 MAPKBP1O60336 1514 aa30.24■■■□□ 2.43
UBXN11-208ENST00000421827 FAM9AQ8IZU1 332 aaPredicted RBP30.19■■■□□ 2.42
UBXN11-208ENST00000421827 UACAQ9BZF9 1416 aa30.19■■■□□ 2.42
UBXN11-208ENST00000421827 GOLGA3Q08378 1498 aa30.19■■■□□ 2.42
UBXN11-208ENST00000421827 UHRF1BP1LA0JNW5 1464 aa30.18■■■□□ 2.42
UBXN11-208ENST00000421827 ABCC2Q92887 1545 aa30.17■■■□□ 2.42
UBXN11-208ENST00000421827 ABCC10Q5T3U5 1492 aa30.17■■■□□ 2.42
UBXN11-208ENST00000421827 KIF13AQ9H1H9 1805 aa30.17■■■□□ 2.42
UBXN11-208ENST00000421827 FAM69CQ0P6D2 419 aa30.14■■■□□ 2.42
UBXN11-208ENST00000421827 DIP2BQ9P265 1576 aa30.08■■■□□ 2.41
UBXN11-208ENST00000421827 KDM5BQ9UGL1 1544 aa30.03■■■□□ 2.4
UBXN11-208ENST00000421827 ASXL2Q76L83 1435 aa30.02■■■□□ 2.4
UBXN11-208ENST00000421827 KIF21BO75037 1637 aa30■■■□□ 2.39
UBXN11-208ENST00000421827 PLB1Q6P1J6 1458 aa30■■■□□ 2.39
UBXN11-208ENST00000421827 P3H3Q8IVL6 736 aa29.98■■■□□ 2.39
UBXN11-208ENST00000421827 ABCA8O94911 1581 aa29.94■■■□□ 2.38
UBXN11-208ENST00000421827 ZCCHC11Q5TAX3 1644 aaKnown RBP29.94■■■□□ 2.38
UBXN11-208ENST00000421827 SAMD9Q5K651 1589 aa29.94■■■□□ 2.38
UBXN11-208ENST00000421827 RANGAP1P46060 587 aaPredicted RBP29.88■■■□□ 2.37
UBXN11-208ENST00000421827 GLI2P10070 1586 aa29.86■■■□□ 2.37
UBXN11-208ENST00000421827 EPRSP07814 1512 aaKnown RBP29.83■■■□□ 2.37
UBXN11-208ENST00000421827 EHMT2Q96KQ7 1210 aa29.83■■■□□ 2.37
UBXN11-208ENST00000421827 TSPOAP1O95153 1857 aa29.82■■■□□ 2.37
UBXN11-208ENST00000421827 UBTFP17480 764 aaKnown RBP29.81■■■□□ 2.36
UBXN11-208ENST00000421827 WDR7Q9Y4E6 1490 aa29.8■■■□□ 2.36
UBXN11-208ENST00000421827 FHOD3Q2V2M9 1422 aa29.78■■■□□ 2.36
UBXN11-208ENST00000421827 EFCAB5A4FU69 1503 aa29.75■■■□□ 2.35
UBXN11-208ENST00000421827 ARID3CA6NKF2 412 aa29.73■■■□□ 2.35
UBXN11-208ENST00000421827 RAPGEF6Q8TEU7 1601 aa29.72■■■□□ 2.35
UBXN11-208ENST00000421827 ATP10BO94823 1461 aa29.72■■■□□ 2.35
UBXN11-208ENST00000421827 PPRC1Q5VV67 1664 aaKnown RBP29.69■■■□□ 2.34
UBXN11-208ENST00000421827 KDM6BO15054 1643 aa29.69■■■□□ 2.34
UBXN11-208ENST00000421827 MAP3K4Q9Y6R4 1608 aa29.69■■■□□ 2.34
UBXN11-208ENST00000421827 KCNH8Q96L42 1107 aa29.68■■■□□ 2.34
UBXN11-208ENST00000421827 NUP153P49790 1475 aaKnown RBP29.63■■■□□ 2.33
UBXN11-208ENST00000421827 TEX14Q8IWB6 1497 aa29.61■■■□□ 2.33
UBXN11-208ENST00000421827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.6■■■□□ 2.33
UBXN11-208ENST00000421827 HNRNPUL2Q1KMD3 747 aaKnown RBP29.6■■■□□ 2.33
UBXN11-208ENST00000421827 CD109Q6YHK3 1445 aa29.58■■■□□ 2.33
UBXN11-208ENST00000421827 CFAP43Q8NDM7 1665 aa29.56■■■□□ 2.32
UBXN11-208ENST00000421827 ARHGAP35Q9NRY4 1499 aa29.56■■■□□ 2.32
UBXN11-208ENST00000421827 MAGI3Q5TCQ9 1506 aa29.52■■■□□ 2.32
UBXN11-208ENST00000421827 FMN1Q68DA7 1419 aa29.5■■■□□ 2.31
UBXN11-208ENST00000421827 COL17A1Q9UMD9 1497 aaPredicted RBP29.48■■■□□ 2.31
UBXN11-208ENST00000421827 PLEKHD1A6NEE1 506 aa29.46■■■□□ 2.31
UBXN11-208ENST00000421827 ABCA9Q8IUA7 1624 aa29.44■■■□□ 2.3
UBXN11-208ENST00000421827 AEBP2Q6ZN18 517 aaPredicted RBP29.42■■■□□ 2.3
UBXN11-208ENST00000421827 ATP1B4Q9UN42 357 aaPredicted RBP29.4■■■□□ 2.3
UBXN11-208ENST00000421827 CDK13Q14004 1512 aaKnown RBP29.38■■■□□ 2.29
UBXN11-208ENST00000421827 HECW1Q76N89 1606 aa29.38■■■□□ 2.29
UBXN11-208ENST00000421827 PHLDB1Q86UU1 1377 aa29.3■■■□□ 2.28
UBXN11-208ENST00000421827 CLIP1P30622 1438 aa29.29■■■□□ 2.28
UBXN11-208ENST00000421827 ARAP3Q8WWN8 1544 aa29.29■■■□□ 2.28
UBXN11-208ENST00000421827 CDK11AQ9UQ88 783 aaPredicted RBP29.27■■■□□ 2.28
UBXN11-208ENST00000421827 NEO1Q92859 1461 aa29.26■■■□□ 2.27
UBXN11-208ENST00000421827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.25■■■□□ 2.27
UBXN11-208ENST00000421827 CASKIN1Q8WXD9 1431 aa29.23■■■□□ 2.27
UBXN11-208ENST00000421827 KDM4FA0A1W2PPD8 638 aa29.2■■■□□ 2.26
UBXN11-208ENST00000421827 TTC37Q6PGP7 1564 aa29.2■■■□□ 2.26
UBXN11-208ENST00000421827 PCF11O94913 1555 aaKnown RBP29.19■■■□□ 2.26
UBXN11-208ENST00000421827 LRRIQ1Q96JM4 1722 aa29.17■■■□□ 2.26
UBXN11-208ENST00000421827 TROQ12816 1431 aaPredicted RBP29.15■■■□□ 2.26
UBXN11-208ENST00000421827 RAPGEF3O95398 923 aa29.14■■■□□ 2.26
UBXN11-208ENST00000421827 FANCAO15360 1455 aa29.14■■■□□ 2.26
UBXN11-208ENST00000421827 CCDC18Q5T9S5 1454 aa29.14■■■□□ 2.26
UBXN11-208ENST00000421827 FYCO1Q9BQS8 1478 aa29.13■■■□□ 2.25
UBXN11-208ENST00000421827 AKNAQ7Z591 1439 aa29.12■■■□□ 2.25
UBXN11-208ENST00000421827 PLCH2O75038 1416 aa29.11■■■□□ 2.25
UBXN11-208ENST00000421827 CFAP74Q9C0B2 1584 aa29.1■■■□□ 2.25
UBXN11-208ENST00000421827 KIF14Q15058 1648 aa29.09■■■□□ 2.25
UBXN11-208ENST00000421827 ADGRL1O94910 1474 aa29.08■■■□□ 2.25
UBXN11-208ENST00000421827 CEP162Q5TB80 1403 aa29.07■■■□□ 2.24
UBXN11-208ENST00000421827 DENND4BO75064 1496 aaPredicted RBP29.06■■■□□ 2.24
UBXN11-208ENST00000421827 FRMPD1Q5SYB0 1578 aa29.05■■■□□ 2.24
UBXN11-208ENST00000421827 LOC105371045A0A1W2PR82 267 aa29.02■■■□□ 2.24
UBXN11-208ENST00000421827 MYO5CQ9NQX4 1742 aa29.01■■■□□ 2.23
UBXN11-208ENST00000421827 EFCAB2Q5VUJ9 269 aa29.01■■■□□ 2.23
UBXN11-208ENST00000421827 RICTORQ6R327 1708 aa28.97■■■□□ 2.23
UBXN11-208ENST00000421827 SCAPERQ9BY12 1400 aa28.95■■■□□ 2.23
UBXN11-208ENST00000421827 ARHGAP5Q13017 1502 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms