RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 EIF4G2P78344 907 aaKnown RBP eCLIP16.29■□□□□ 0.2
CLCN4-203ENST00000421085 ABCC9O60706 1549 aa16.28■□□□□ 0.2
CLCN4-203ENST00000421085 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
CLCN4-203ENST00000421085 SENP3-EIF4A1A0A087X0R7 540 aa16.27■□□□□ 0.2
CLCN4-203ENST00000421085 PTMAP06454 111 aaKnown RBP16.26■□□□□ 0.19
CLCN4-203ENST00000421085 DNTTIP2Q5QJE6 756 aaKnown RBP16.25■□□□□ 0.19
CLCN4-203ENST00000421085 PPP4R2Q9NY27 417 aa16.25■□□□□ 0.19
CLCN4-203ENST00000421085 DEKP35659 375 aaKnown RBP16.24■□□□□ 0.19
CLCN4-203ENST00000421085 MYO15BQ96JP2 1530 aa16.24■□□□□ 0.19
CLCN4-203ENST00000421085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.21■□□□□ 0.19
CLCN4-203ENST00000421085 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
CLCN4-203ENST00000421085 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
CLCN4-203ENST00000421085 B4GALNT3Q6L9W6 998 aa16.15■□□□□ 0.18
CLCN4-203ENST00000421085 TPRNQ4KMQ1 711 aa16.15■□□□□ 0.18
CLCN4-203ENST00000421085 RBM19Q9Y4C8 960 aaKnown RBP16.15■□□□□ 0.18
CLCN4-203ENST00000421085 RGS3P49796 1198 aa16.12■□□□□ 0.17
CLCN4-203ENST00000421085 CDK11BP21127 795 aaKnown RBP16.11■□□□□ 0.17
CLCN4-203ENST00000421085 CLIP1P30622 1438 aa16.11■□□□□ 0.17
CLCN4-203ENST00000421085 RRP7BPQ9NSQ0 103 aa16.1■□□□□ 0.17
CLCN4-203ENST00000421085 MTUS2Q5JR59 1369 aa16.1■□□□□ 0.17
CLCN4-203ENST00000421085 ESF1Q9H501 851 aaKnown RBP16.07■□□□□ 0.16
CLCN4-203ENST00000421085 PLCB2Q00722 1185 aa16.06■□□□□ 0.16
CLCN4-203ENST00000421085 ZRSR1Q15695 479 aaKnown RBP16.06■□□□□ 0.16
CLCN4-203ENST00000421085 TSPY4P0CV99 314 aa16.06■□□□□ 0.16
CLCN4-203ENST00000421085 TSPY10P0CW01 314 aa16.06■□□□□ 0.16
CLCN4-203ENST00000421085 CASC1Q6TDU7 716 aa16.05■□□□□ 0.16
CLCN4-203ENST00000421085 FTSJ3Q8IY81 847 aaKnown RBP16.05■□□□□ 0.16
CLCN4-203ENST00000421085 CEP162Q5TB80 1403 aa16.03■□□□□ 0.16
CLCN4-203ENST00000421085 HSP90AB1P08238 724 aaKnown RBP16.02■□□□□ 0.16
CLCN4-203ENST00000421085 L1TD1Q5T7N2 865 aaKnown RBP16.02■□□□□ 0.16
CLCN4-203ENST00000421085 ZBTB4Q9P1Z0 1013 aaPredicted RBP16■□□□□ 0.15
CLCN4-203ENST00000421085 ARID4BQ4LE39 1312 aaPredicted RBP16■□□□□ 0.15
CLCN4-203ENST00000421085 MSNP26038 577 aaKnown RBP15.98■□□□□ 0.15
CLCN4-203ENST00000421085 KNSTRNQ9Y448 316 aa15.98■□□□□ 0.15
CLCN4-203ENST00000421085 SIN3AQ96ST3 1273 aa15.98■□□□□ 0.15
CLCN4-203ENST00000421085 FRAT1Q92837 279 aaPredicted RBP15.98■□□□□ 0.15
CLCN4-203ENST00000421085 SCRIBQ14160 1630 aa15.98■□□□□ 0.15
CLCN4-203ENST00000421085 NEUROD2Q15784 382 aa15.98■□□□□ 0.15
CLCN4-203ENST00000421085 AMER1Q5JTC6 1135 aaPredicted RBP15.97■□□□□ 0.15
CLCN4-203ENST00000421085 PLPPR3Q6T4P5 718 aa15.96■□□□□ 0.15
CLCN4-203ENST00000421085 RGL3Q3MIN7 710 aa15.96■□□□□ 0.15
CLCN4-203ENST00000421085 CFAP53Q96M91 514 aa15.96■□□□□ 0.15
CLCN4-203ENST00000421085 TSHZ2Q9NRE2 1034 aa15.95■□□□□ 0.14
CLCN4-203ENST00000421085 SPRYD3Q8NCJ5 442 aa15.94■□□□□ 0.14
CLCN4-203ENST00000421085 CARD11Q9BXL7 1154 aa15.94■□□□□ 0.14
CLCN4-203ENST00000421085 HSCBQ8IWL3 235 aa15.93■□□□□ 0.14
CLCN4-203ENST00000421085 GOLGA3Q08378 1498 aa15.93■□□□□ 0.14
CLCN4-203ENST00000421085 CHAF1AQ13111 956 aaPredicted RBP15.93■□□□□ 0.14
CLCN4-203ENST00000421085 SENP3Q9H4L4 574 aaPredicted RBP15.92■□□□□ 0.14
CLCN4-203ENST00000421085 GOLGA6L6A8MZA4 724 aa15.9■□□□□ 0.14
CLCN4-203ENST00000421085 ZCCHC6Q5VYS8 1495 aaKnown RBP15.9■□□□□ 0.14
CLCN4-203ENST00000421085 CDCA8Q53HL2 280 aa15.89■□□□□ 0.13
CLCN4-203ENST00000421085 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
CLCN4-203ENST00000421085 CC2D1BQ5T0F9 858 aaKnown RBP15.88■□□□□ 0.13
CLCN4-203ENST00000421085 ZBTB7CA1YPR0 619 aa15.86■□□□□ 0.13
CLCN4-203ENST00000421085 RSF1Q96T23 1441 aaPredicted RBP15.86■□□□□ 0.13
CLCN4-203ENST00000421085 ARID3AQ99856 593 aa15.85■□□□□ 0.13
CLCN4-203ENST00000421085 PNNQ9H307 717 aaKnown RBP15.85■□□□□ 0.13
CLCN4-203ENST00000421085 MAPK8IP3Q9UPT6 1336 aa15.85■□□□□ 0.13
CLCN4-203ENST00000421085 NRDCO43847 1150 aa15.84■□□□□ 0.13
CLCN4-203ENST00000421085 GZF1Q9H116 711 aaPredicted RBP15.84■□□□□ 0.13
CLCN4-203ENST00000421085 EEA1Q15075 1411 aa15.82■□□□□ 0.12
CLCN4-203ENST00000421085 MS4A1P11836 297 aa15.82■□□□□ 0.12
CLCN4-203ENST00000421085 TAOK2Q9UL54 1235 aa15.82■□□□□ 0.12
CLCN4-203ENST00000421085 PLEKHG5O94827 1062 aa15.81■□□□□ 0.12
CLCN4-203ENST00000421085 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
CLCN4-203ENST00000421085 TNIKQ9UKE5 1360 aa15.81■□□□□ 0.12
CLCN4-203ENST00000421085 CHMP4BQ9H444 224 aaKnown RBP15.81■□□□□ 0.12
CLCN4-203ENST00000421085 GOLGA6L4A6NEF3 574 aa15.8■□□□□ 0.12
CLCN4-203ENST00000421085 DRC7Q8IY82 874 aa15.8■□□□□ 0.12
CLCN4-203ENST00000421085 C14orf37Q86TY3 774 aa15.8■□□□□ 0.12
CLCN4-203ENST00000421085 IPO9Q96P70 1041 aaKnown RBP15.79■□□□□ 0.12
CLCN4-203ENST00000421085 SLKQ9H2G2 1235 aaPredicted RBP15.79■□□□□ 0.12
CLCN4-203ENST00000421085 NUDCQ9Y266 331 aa15.79■□□□□ 0.12
CLCN4-203ENST00000421085 A0A0G2JS52 829 aa15.78■□□□□ 0.12
CLCN4-203ENST00000421085 FGD1P98174 961 aa15.77■□□□□ 0.12
CLCN4-203ENST00000421085 TCERG1O14776 1098 aaKnown RBP15.77■□□□□ 0.11
CLCN4-203ENST00000421085 KCNJ4P48050 445 aa15.76■□□□□ 0.11
CLCN4-203ENST00000421085 GBP4Q96PP9 640 aa15.76■□□□□ 0.11
CLCN4-203ENST00000421085 TULP1O00294 542 aaPredicted RBP15.75■□□□□ 0.11
CLCN4-203ENST00000421085 GOLGA6L3A6NEY3 463 aa15.74■□□□□ 0.11
CLCN4-203ENST00000421085 NAP1L2Q9ULW6 460 aaPredicted RBP15.74■□□□□ 0.11
CLCN4-203ENST00000421085 OS9Q13438 667 aaPredicted RBP15.73■□□□□ 0.11
CLCN4-203ENST00000421085 U2SURPO15042 1029 aaKnown RBP15.73■□□□□ 0.11
CLCN4-203ENST00000421085 PPP1R15AO75807 674 aaPredicted RBP15.73■□□□□ 0.11
CLCN4-203ENST00000421085 KIAA2012Q0VF49 1180 aa15.73■□□□□ 0.11
CLCN4-203ENST00000421085 PTMSP20962 102 aa15.72■□□□□ 0.11
CLCN4-203ENST00000421085 RCAN3Q9UKA8 241 aa15.71■□□□□ 0.11
CLCN4-203ENST00000421085 HSPA5P11021 654 aaKnown RBP15.71■□□□□ 0.11
CLCN4-203ENST00000421085 MCCP23508 829 aa15.71■□□□□ 0.11
CLCN4-203ENST00000421085 CFDP1Q9UEE9 299 aaPredicted RBP15.7■□□□□ 0.1
CLCN4-203ENST00000421085 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
CLCN4-203ENST00000421085 CCNB3Q8WWL7 1395 aa15.7■□□□□ 0.1
CLCN4-203ENST00000421085 CEP164Q9UPV0 1460 aa15.69■□□□□ 0.1
CLCN4-203ENST00000421085 PLEKHD1A6NEE1 506 aa15.69■□□□□ 0.1
CLCN4-203ENST00000421085 KCNH8Q96L42 1107 aa15.68■□□□□ 0.1
CLCN4-203ENST00000421085 TMF1P82094 1093 aa15.68■□□□□ 0.1
CLCN4-203ENST00000421085 HSP90AA2PQ14568 343 aaPredicted RBP15.67■□□□□ 0.1
CLCN4-203ENST00000421085 CHMP7Q8WUX9 453 aaPredicted RBP15.67■□□□□ 0.1
CLCN4-203ENST00000421085 TNNT3P45378 269 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms