RNA–Protein interactions for RNA: ENST00000420831.1

SEMA3F-204, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-204ENST00000420831 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
SEMA3F-204ENST00000420831 CEP170Q5SW79 1584 aa14.06□□□□□ -0.16
SEMA3F-204ENST00000420831 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
SEMA3F-204ENST00000420831 NUP160Q12769 1436 aa14.04□□□□□ -0.16
SEMA3F-204ENST00000420831 ARAP1Q96P48 1450 aa14.04□□□□□ -0.16
SEMA3F-204ENST00000420831 ERCC6L2Q5T890 1561 aa14.02□□□□□ -0.16
SEMA3F-204ENST00000420831 CARMIL1Q5VZK9 1371 aa13.99□□□□□ -0.17
SEMA3F-204ENST00000420831 JPH4Q96JJ6 628 aa13.94□□□□□ -0.18
SEMA3F-204ENST00000420831 KCNA4P22459 653 aa13.91□□□□□ -0.18
SEMA3F-204ENST00000420831 CUL7Q14999 1698 aa13.91□□□□□ -0.18
SEMA3F-204ENST00000420831 SHROOM2Q13796 1616 aa13.9□□□□□ -0.19
SEMA3F-204ENST00000420831 PRG4Q92954 1404 aaPredicted RBP13.9□□□□□ -0.19
SEMA3F-204ENST00000420831 FAM9AQ8IZU1 332 aaPredicted RBP13.88□□□□□ -0.19
SEMA3F-204ENST00000420831 KIAA0586Q9BVV6 1533 aa13.87□□□□□ -0.19
SEMA3F-204ENST00000420831 RAPGEF2Q9Y4G8 1499 aa13.86□□□□□ -0.19
SEMA3F-204ENST00000420831 PRXQ9BXM0 1461 aa13.84□□□□□ -0.19
SEMA3F-204ENST00000420831 PPP4R3CPQ6ZMV5 832 aa13.83□□□□□ -0.2
SEMA3F-204ENST00000420831 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
SEMA3F-204ENST00000420831 TTBK1Q5TCY1 1321 aaPredicted RBP13.81□□□□□ -0.2
SEMA3F-204ENST00000420831 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
SEMA3F-204ENST00000420831 IQGAP2Q13576 1575 aa13.76□□□□□ -0.21
SEMA3F-204ENST00000420831 DISP1Q96F81 1524 aa13.76□□□□□ -0.21
SEMA3F-204ENST00000420831 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
SEMA3F-204ENST00000420831 MSH5O43196 834 aa13.71□□□□□ -0.21
SEMA3F-204ENST00000420831 PTPRGP23470 1445 aa13.71□□□□□ -0.22
SEMA3F-204ENST00000420831 UGGT2Q9NYU1 1516 aa13.7□□□□□ -0.22
SEMA3F-204ENST00000420831 TNIKQ9UKE5 1360 aa13.7□□□□□ -0.22
SEMA3F-204ENST00000420831 P3H3Q8IVL6 736 aa13.69□□□□□ -0.22
SEMA3F-204ENST00000420831 EEA1Q15075 1411 aa13.69□□□□□ -0.22
SEMA3F-204ENST00000420831 ADCY10Q96PN6 1610 aa13.68□□□□□ -0.22
SEMA3F-204ENST00000420831 RANGAP1P46060 587 aaPredicted RBP13.68□□□□□ -0.22
SEMA3F-204ENST00000420831 CARMIL2Q6F5E8 1435 aa13.67□□□□□ -0.22
SEMA3F-204ENST00000420831 KIAA0556O60303 1618 aa13.65□□□□□ -0.22
SEMA3F-204ENST00000420831 CTTNBP2Q8WZ74 1663 aa13.64□□□□□ -0.23
SEMA3F-204ENST00000420831 PLB1Q6P1J6 1458 aa13.61□□□□□ -0.23
SEMA3F-204ENST00000420831 UACAQ9BZF9 1416 aa13.6□□□□□ -0.23
SEMA3F-204ENST00000420831 KIF21BO75037 1637 aa13.6□□□□□ -0.23
SEMA3F-204ENST00000420831 ARID3CA6NKF2 412 aa13.57□□□□□ -0.24
SEMA3F-204ENST00000420831 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
SEMA3F-204ENST00000420831 UBTFP17480 764 aaKnown RBP13.57□□□□□ -0.24
SEMA3F-204ENST00000420831 ABCC2Q92887 1545 aa13.57□□□□□ -0.24
SEMA3F-204ENST00000420831 UHRF1BP1LA0JNW5 1464 aa13.56□□□□□ -0.24
SEMA3F-204ENST00000420831 GOLGA3Q08378 1498 aa13.55□□□□□ -0.24
SEMA3F-204ENST00000420831 FAM69CQ0P6D2 419 aa13.55□□□□□ -0.24
SEMA3F-204ENST00000420831 FHOD3Q2V2M9 1422 aa13.55□□□□□ -0.24
SEMA3F-204ENST00000420831 SAMD9Q5K651 1589 aa13.54□□□□□ -0.24
SEMA3F-204ENST00000420831 MAPKBP1O60336 1514 aa13.54□□□□□ -0.24
SEMA3F-204ENST00000420831 ASXL2Q76L83 1435 aa13.53□□□□□ -0.24
SEMA3F-204ENST00000420831 ABCC10Q5T3U5 1492 aa13.53□□□□□ -0.24
SEMA3F-204ENST00000420831 ABCA8O94911 1581 aa13.53□□□□□ -0.24
SEMA3F-204ENST00000420831 KDM5BQ9UGL1 1544 aa13.52□□□□□ -0.25
SEMA3F-204ENST00000420831 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
SEMA3F-204ENST00000420831 KIF13AQ9H1H9 1805 aa13.5□□□□□ -0.25
SEMA3F-204ENST00000420831 DIP2BQ9P265 1576 aa13.49□□□□□ -0.25
SEMA3F-204ENST00000420831 ZCCHC11Q5TAX3 1644 aaKnown RBP13.49□□□□□ -0.25
SEMA3F-204ENST00000420831 ATP10BO94823 1461 aa13.47□□□□□ -0.25
SEMA3F-204ENST00000420831 ARHGAP35Q9NRY4 1499 aa13.47□□□□□ -0.25
SEMA3F-204ENST00000420831 LOC105371045A0A1W2PR82 267 aa13.45□□□□□ -0.26
SEMA3F-204ENST00000420831 KCNH8Q96L42 1107 aa13.44□□□□□ -0.26
SEMA3F-204ENST00000420831 EPRSP07814 1512 aaKnown RBP13.44□□□□□ -0.26
SEMA3F-204ENST00000420831 SCAF1Q9H7N4 1312 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-204ENST00000420831 NUP153P49790 1475 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-204ENST00000420831 EFCAB5A4FU69 1503 aa13.41□□□□□ -0.26
SEMA3F-204ENST00000420831 RAPGEF6Q8TEU7 1601 aa13.41□□□□□ -0.26
SEMA3F-204ENST00000420831 WDR7Q9Y4E6 1490 aa13.41□□□□□ -0.26
SEMA3F-204ENST00000420831 NPM3O75607 178 aaKnown RBP13.38□□□□□ -0.27
SEMA3F-204ENST00000420831 GLI2P10070 1586 aa13.37□□□□□ -0.27
SEMA3F-204ENST00000420831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.37□□□□□ -0.27
SEMA3F-204ENST00000420831 HNRNPUL2Q1KMD3 747 aaKnown RBP13.37□□□□□ -0.27
SEMA3F-204ENST00000420831 PPRC1Q5VV67 1664 aaKnown RBP13.37□□□□□ -0.27
SEMA3F-204ENST00000420831 TSPOAP1O95153 1857 aa13.36□□□□□ -0.27
SEMA3F-204ENST00000420831 CDK13Q14004 1512 aaKnown RBP13.36□□□□□ -0.27
SEMA3F-204ENST00000420831 ATP1B4Q9UN42 357 aaPredicted RBP13.36□□□□□ -0.27
SEMA3F-204ENST00000420831 COL17A1Q9UMD9 1497 aaPredicted RBP13.36□□□□□ -0.27
SEMA3F-204ENST00000420831 CNKSR2Q8WXI2 1034 aa13.34□□□□□ -0.27
SEMA3F-204ENST00000420831 CLIP1P30622 1438 aa13.33□□□□□ -0.28
SEMA3F-204ENST00000420831 MAP3K4Q9Y6R4 1608 aa13.33□□□□□ -0.28
SEMA3F-204ENST00000420831 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
SEMA3F-204ENST00000420831 CD109Q6YHK3 1445 aa13.31□□□□□ -0.28
SEMA3F-204ENST00000420831 FMN1Q68DA7 1419 aa13.3□□□□□ -0.28
SEMA3F-204ENST00000420831 PLEKHD1A6NEE1 506 aa13.28□□□□□ -0.28
SEMA3F-204ENST00000420831 CEP162Q5TB80 1403 aa13.28□□□□□ -0.28
SEMA3F-204ENST00000420831 SLC4A1APQ9BWU0 796 aaKnown RBP13.27□□□□□ -0.29
SEMA3F-204ENST00000420831 PCF11O94913 1555 aaKnown RBP13.27□□□□□ -0.29
SEMA3F-204ENST00000420831 LRRIQ1Q96JM4 1722 aa13.27□□□□□ -0.29
SEMA3F-204ENST00000420831 KDM6BO15054 1643 aa13.26□□□□□ -0.29
SEMA3F-204ENST00000420831 MAGI3Q5TCQ9 1506 aa13.25□□□□□ -0.29
SEMA3F-204ENST00000420831 CASKIN1Q8WXD9 1431 aa13.25□□□□□ -0.29
SEMA3F-204ENST00000420831 HECW1Q76N89 1606 aa13.24□□□□□ -0.29
SEMA3F-204ENST00000420831 ABCA9Q8IUA7 1624 aa13.24□□□□□ -0.29
SEMA3F-204ENST00000420831 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.23□□□□□ -0.29
SEMA3F-204ENST00000420831 CFAP43Q8NDM7 1665 aa13.22□□□□□ -0.29
SEMA3F-204ENST00000420831 TTC37Q6PGP7 1564 aa13.21□□□□□ -0.29
SEMA3F-204ENST00000420831 TEX14Q8IWB6 1497 aa13.21□□□□□ -0.3
SEMA3F-204ENST00000420831 RAPGEF3O95398 923 aa13.2□□□□□ -0.3
SEMA3F-204ENST00000420831 KIF14Q15058 1648 aa13.2□□□□□ -0.3
SEMA3F-204ENST00000420831 TROQ12816 1431 aaPredicted RBP13.18□□□□□ -0.3
SEMA3F-204ENST00000420831 FYCO1Q9BQS8 1478 aa13.17□□□□□ -0.3
SEMA3F-204ENST00000420831 KDM4FA0A1W2PPD8 638 aa13.15□□□□□ -0.3
SEMA3F-204ENST00000420831 CDK11AQ9UQ88 783 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms