RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 TSHZ2Q9NRE2 1034 aa9.06□□□□□ -0.96
CHD2-202ENST00000420239 KDM2AQ9Y2K7 1162 aa9.06□□□□□ -0.96
CHD2-202ENST00000420239 SPOCK2Q92563 424 aa9.05□□□□□ -0.96
CHD2-202ENST00000420239 ABCB7O75027 752 aa9.05□□□□□ -0.96
CHD2-202ENST00000420239 ECM2O94769 699 aaPredicted RBP9.05□□□□□ -0.96
CHD2-202ENST00000420239 KLHL34Q8N239 644 aa9.05□□□□□ -0.96
CHD2-202ENST00000420239 SUPT16HQ9Y5B9 1047 aaKnown RBP9.05□□□□□ -0.96
CHD2-202ENST00000420239 POTEHQ6S545 545 aa9.04□□□□□ -0.96
CHD2-202ENST00000420239 BBXQ8WY36 941 aaPredicted RBP9.03□□□□□ -0.96
CHD2-202ENST00000420239 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.03□□□□□ -0.96
CHD2-202ENST00000420239 ZBTB12Q9Y330 459 aaPredicted RBP9.03□□□□□ -0.96
CHD2-202ENST00000420239 MROH2BQ7Z745 1585 aa9.02□□□□□ -0.97
CHD2-202ENST00000420239 BAZ1AQ9NRL2 1556 aaPredicted RBP9.02□□□□□ -0.97
CHD2-202ENST00000420239 PAXIP1Q6ZW49 1069 aaPredicted RBP9.01□□□□□ -0.97
CHD2-202ENST00000420239 CLSPNQ9HAW4 1339 aa9□□□□□ -0.97
CHD2-202ENST00000420239 RGL2O15211 777 aa9□□□□□ -0.97
CHD2-202ENST00000420239 CFAP44Q96MT7 982 aa8.99□□□□□ -0.97
CHD2-202ENST00000420239 TNIKQ9UKE5 1360 aa8.99□□□□□ -0.97
CHD2-202ENST00000420239 CECR2Q9BXF3 1484 aa8.99□□□□□ -0.97
CHD2-202ENST00000420239 WIZO95785 1651 aa8.99□□□□□ -0.97
CHD2-202ENST00000420239 CEP162Q5TB80 1403 aa8.97□□□□□ -0.97
CHD2-202ENST00000420239 EEA1Q15075 1411 aa8.96□□□□□ -0.98
CHD2-202ENST00000420239 ZNF692Q9BU19 519 aaPredicted RBP8.95□□□□□ -0.98
CHD2-202ENST00000420239 NACADO15069 1562 aa8.95□□□□□ -0.98
CHD2-202ENST00000420239 TPRNQ4KMQ1 711 aa8.95□□□□□ -0.98
CHD2-202ENST00000420239 PLCD3Q8N3E9 789 aa8.95□□□□□ -0.98
CHD2-202ENST00000420239 C1QBPQ07021 282 aaKnown RBP8.94□□□□□ -0.98
CHD2-202ENST00000420239 STAG3Q9UJ98 1225 aa8.94□□□□□ -0.98
CHD2-202ENST00000420239 OSCARQ8IYS5 282 aa8.92□□□□□ -0.98
CHD2-202ENST00000420239 SSUH2Q9Y2M2 353 aa8.91□□□□□ -0.98
CHD2-202ENST00000420239 TOP2AP11388 1531 aaKnown RBP8.9□□□□□ -0.99
CHD2-202ENST00000420239 CCDC88BA6NC98 1476 aa8.9□□□□□ -0.99
CHD2-202ENST00000420239 SPRYD3Q8NCJ5 442 aa8.89□□□□□ -0.99
CHD2-202ENST00000420239 SPDYE2BA6NHP3 402 aa8.88□□□□□ -0.99
CHD2-202ENST00000420239 SPDYE6P0CI01 402 aa8.88□□□□□ -0.99
CHD2-202ENST00000420239 SPDYE2Q495Y8 402 aa8.88□□□□□ -0.99
CHD2-202ENST00000420239 PABPN1Q86U42 306 aaKnown RBP eCLIP8.88□□□□□ -0.99
CHD2-202ENST00000420239 ABCC8Q09428 1581 aa8.86□□□□□ -0.99
CHD2-202ENST00000420239 GOLGA3Q08378 1498 aa8.86□□□□□ -0.99
CHD2-202ENST00000420239 CHGAP10645 457 aaKnown RBP8.85□□□□□ -0.99
CHD2-202ENST00000420239 SMARCA2P51531 1590 aa8.85□□□□□ -0.99
CHD2-202ENST00000420239 SOGA1O94964 1423 aa8.84□□□□□ -0.99
CHD2-202ENST00000420239 DSG3P32926 999 aa8.84□□□□□ -0.99
CHD2-202ENST00000420239 CIZ1Q9ULV3 898 aaPredicted RBP8.84□□□□□ -0.99
CHD2-202ENST00000420239 KIF21BO75037 1637 aa8.83□□□□□ -1
CHD2-202ENST00000420239 RBM19Q9Y4C8 960 aaKnown RBP8.79□□□□□ -1
CHD2-202ENST00000420239 SMARCA4P51532 1647 aa8.79□□□□□ -1
CHD2-202ENST00000420239 RUSC2Q8N2Y8 1516 aa8.79□□□□□ -1
CHD2-202ENST00000420239 CEP164Q9UPV0 1460 aa8.78□□□□□ -1
CHD2-202ENST00000420239 VPS8Q8N3P4 1428 aa8.78□□□□□ -1
CHD2-202ENST00000420239 BAZ1BQ9UIG0 1483 aaKnown RBP8.77□□□□□ -1.01
CHD2-202ENST00000420239 DNAJC5Q9H3Z4 198 aa8.76□□□□□ -1.01
CHD2-202ENST00000420239 RNF25Q96BH1 459 aaPredicted RBP8.75□□□□□ -1.01
CHD2-202ENST00000420239 CLIP1P30622 1438 aa8.75□□□□□ -1.01
CHD2-202ENST00000420239 HS6ST3Q8IZP7 471 aa8.74□□□□□ -1.01
CHD2-202ENST00000420239 KCNH8Q96L42 1107 aa8.74□□□□□ -1.01
CHD2-202ENST00000420239 ZBTB47Q9UFB7 747 aaPredicted RBP8.74□□□□□ -1.01
CHD2-202ENST00000420239 UBTFP17480 764 aaKnown RBP8.74□□□□□ -1.01
CHD2-202ENST00000420239 DHX57Q6P158 1386 aaKnown RBP8.74□□□□□ -1.01
CHD2-202ENST00000420239 PLEKHG5O94827 1062 aa8.72□□□□□ -1.01
CHD2-202ENST00000420239 CUX2O14529 1486 aa8.72□□□□□ -1.01
CHD2-202ENST00000420239 NBR1Q14596 966 aa8.7□□□□□ -1.02
CHD2-202ENST00000420239 ITGAEP38570 1179 aa8.68□□□□□ -1.02
CHD2-202ENST00000420239 NKX1-1Q15270 411 aaPredicted RBP8.68□□□□□ -1.02
CHD2-202ENST00000420239 SYNJ1O43426 1573 aa8.67□□□□□ -1.02
CHD2-202ENST00000420239 PEG3Q9GZU2 1588 aa8.67□□□□□ -1.02
CHD2-202ENST00000420239 FANCIQ9NVI1 1328 aa8.66□□□□□ -1.02
CHD2-202ENST00000420239 RRBP1Q9P2E9 1410 aaKnown RBP8.66□□□□□ -1.02
CHD2-202ENST00000420239 ERICH6Q7L0X2 663 aa8.65□□□□□ -1.02
CHD2-202ENST00000420239 RAPGEF2Q9Y4G8 1499 aa8.63□□□□□ -1.03
CHD2-202ENST00000420239 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
CHD2-202ENST00000420239 DEKP35659 375 aaKnown RBP8.62□□□□□ -1.03
CHD2-202ENST00000420239 NUBP1P53384 320 aa8.62□□□□□ -1.03
CHD2-202ENST00000420239 GSE1Q14687 1217 aa8.62□□□□□ -1.03
CHD2-202ENST00000420239 ANO8Q9HCE9 1232 aaPredicted RBP8.62□□□□□ -1.03
CHD2-202ENST00000420239 UNC13AQ9UPW8 1703 aa8.62□□□□□ -1.03
CHD2-202ENST00000420239 GTPBP6O43824 516 aaPredicted RBP8.61□□□□□ -1.03
CHD2-202ENST00000420239 NEFLP07196 543 aa8.61□□□□□ -1.03
CHD2-202ENST00000420239 RIOK3O14730 519 aaKnown RBP8.6□□□□□ -1.03
CHD2-202ENST00000420239 ARAP1Q96P48 1450 aa8.6□□□□□ -1.03
CHD2-202ENST00000420239 MYT1LQ9UL68 1186 aa8.58□□□□□ -1.04
CHD2-202ENST00000420239 MAPKBP1O60336 1514 aa8.57□□□□□ -1.04
CHD2-202ENST00000420239 TOP2BQ02880 1626 aa8.57□□□□□ -1.04
CHD2-202ENST00000420239 BIVM-ERCC5R4GMW8 1640 aa8.57□□□□□ -1.04
CHD2-202ENST00000420239 PRXQ9BXM0 1461 aa8.57□□□□□ -1.04
CHD2-202ENST00000420239 STK25O00506 426 aa8.57□□□□□ -1.04
CHD2-202ENST00000420239 DCAF8Q5TAQ9 597 aa8.56□□□□□ -1.04
CHD2-202ENST00000420239 CCER2I3L3R5 266 aa8.55□□□□□ -1.04
CHD2-202ENST00000420239 SALL2Q9Y467 1007 aaPredicted RBP8.54□□□□□ -1.04
CHD2-202ENST00000420239 TRIM52Q96A61 297 aa8.54□□□□□ -1.04
CHD2-202ENST00000420239 TIMELESSQ9UNS1 1208 aa8.54□□□□□ -1.04
CHD2-202ENST00000420239 CCNB3Q8WWL7 1395 aa8.53□□□□□ -1.04
CHD2-202ENST00000420239 MAP3K1Q13233 1512 aa8.53□□□□□ -1.04
CHD2-202ENST00000420239 PPP1R15AO75807 674 aaPredicted RBP8.53□□□□□ -1.04
CHD2-202ENST00000420239 DDX10Q13206 875 aaKnown RBP8.53□□□□□ -1.04
CHD2-202ENST00000420239 VGFO15240 615 aaPredicted RBP8.52□□□□□ -1.05
CHD2-202ENST00000420239 KANK4Q5T7N3 995 aaPredicted RBP8.52□□□□□ -1.05
CHD2-202ENST00000420239 CDK11AQ9UQ88 783 aaPredicted RBP8.52□□□□□ -1.05
CHD2-202ENST00000420239 FAM212AQ96EL1 285 aa8.51□□□□□ -1.05
CHD2-202ENST00000420239 MNX1P50219 401 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms