RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 CARMIL1Q5VZK9 1371 aa27.2■■□□□ 1.94
NOD1-204ENST00000419601 JPH4Q96JJ6 628 aa27.17■■□□□ 1.94
NOD1-204ENST00000419601 PRG4Q92954 1404 aaPredicted RBP27.16■■□□□ 1.94
NOD1-204ENST00000419601 KIAA0586Q9BVV6 1533 aa27.14■■□□□ 1.94
NOD1-204ENST00000419601 RAPGEF2Q9Y4G8 1499 aa27■■□□□ 1.91
NOD1-204ENST00000419601 IQGAP2Q13576 1575 aa26.95■■□□□ 1.9
NOD1-204ENST00000419601 AEBP2Q6ZN18 517 aaPredicted RBP26.91■■□□□ 1.9
NOD1-204ENST00000419601 CARMIL2Q6F5E8 1435 aa26.87■■□□□ 1.89
NOD1-204ENST00000419601 PRXQ9BXM0 1461 aa26.83■■□□□ 1.89
NOD1-204ENST00000419601 PTPRGP23470 1445 aa26.79■■□□□ 1.88
NOD1-204ENST00000419601 UGGT2Q9NYU1 1516 aa26.79■■□□□ 1.88
NOD1-204ENST00000419601 TNIKQ9UKE5 1360 aa26.78■■□□□ 1.88
NOD1-204ENST00000419601 ADCY10Q96PN6 1610 aa26.78■■□□□ 1.88
NOD1-204ENST00000419601 CTTNBP2Q8WZ74 1663 aa26.78■■□□□ 1.88
NOD1-204ENST00000419601 DISP1Q96F81 1524 aa26.76■■□□□ 1.87
NOD1-204ENST00000419601 NPM1P06748 294 aaKnown RBP eCLIP26.75■■□□□ 1.87
NOD1-204ENST00000419601 EEA1Q15075 1411 aa26.73■■□□□ 1.87
NOD1-204ENST00000419601 CSRNP3Q8WYN3 585 aa26.73■■□□□ 1.87
NOD1-204ENST00000419601 TTBK1Q5TCY1 1321 aaPredicted RBP26.69■■□□□ 1.86
NOD1-204ENST00000419601 MAPKBP1O60336 1514 aa26.69■■□□□ 1.86
NOD1-204ENST00000419601 KIAA0556O60303 1618 aa26.68■■□□□ 1.86
NOD1-204ENST00000419601 KIF13AQ9H1H9 1805 aa26.65■■□□□ 1.86
NOD1-204ENST00000419601 GOLGA3Q08378 1498 aa26.62■■□□□ 1.85
NOD1-204ENST00000419601 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
NOD1-204ENST00000419601 UHRF1BP1LA0JNW5 1464 aa26.61■■□□□ 1.85
NOD1-204ENST00000419601 ABCC2Q92887 1545 aa26.6■■□□□ 1.85
NOD1-204ENST00000419601 UACAQ9BZF9 1416 aa26.6■■□□□ 1.85
NOD1-204ENST00000419601 ABCC10Q5T3U5 1492 aa26.59■■□□□ 1.85
NOD1-204ENST00000419601 FAM9AQ8IZU1 332 aaPredicted RBP26.55■■□□□ 1.84
NOD1-204ENST00000419601 DIP2BQ9P265 1576 aa26.54■■□□□ 1.84
NOD1-204ENST00000419601 FAM69CQ0P6D2 419 aa26.53■■□□□ 1.84
NOD1-204ENST00000419601 KIF21BO75037 1637 aa26.48■■□□□ 1.83
NOD1-204ENST00000419601 KDM5BQ9UGL1 1544 aa26.48■■□□□ 1.83
NOD1-204ENST00000419601 PLB1Q6P1J6 1458 aa26.45■■□□□ 1.82
NOD1-204ENST00000419601 ASXL2Q76L83 1435 aa26.45■■□□□ 1.82
NOD1-204ENST00000419601 ZCCHC11Q5TAX3 1644 aaKnown RBP26.42■■□□□ 1.82
NOD1-204ENST00000419601 SAMD9Q5K651 1589 aa26.41■■□□□ 1.82
NOD1-204ENST00000419601 ABCA8O94911 1581 aa26.41■■□□□ 1.82
NOD1-204ENST00000419601 P3H3Q8IVL6 736 aa26.37■■□□□ 1.81
NOD1-204ENST00000419601 GLI2P10070 1586 aa26.34■■□□□ 1.81
NOD1-204ENST00000419601 TSPOAP1O95153 1857 aa26.32■■□□□ 1.8
NOD1-204ENST00000419601 EPRSP07814 1512 aaKnown RBP26.29■■□□□ 1.8
NOD1-204ENST00000419601 RANGAP1P46060 587 aaPredicted RBP26.28■■□□□ 1.8
NOD1-204ENST00000419601 WDR7Q9Y4E6 1490 aa26.28■■□□□ 1.8
NOD1-204ENST00000419601 EFCAB5A4FU69 1503 aa26.25■■□□□ 1.79
NOD1-204ENST00000419601 UBTFP17480 764 aaKnown RBP26.24■■□□□ 1.79
NOD1-204ENST00000419601 KDM6BO15054 1643 aa26.24■■□□□ 1.79
NOD1-204ENST00000419601 FHOD3Q2V2M9 1422 aa26.22■■□□□ 1.79
NOD1-204ENST00000419601 RAPGEF6Q8TEU7 1601 aa26.22■■□□□ 1.79
NOD1-204ENST00000419601 EHMT2Q96KQ7 1210 aa26.22■■□□□ 1.79
NOD1-204ENST00000419601 MAP3K4Q9Y6R4 1608 aa26.21■■□□□ 1.79
NOD1-204ENST00000419601 PPRC1Q5VV67 1664 aaKnown RBP26.19■■□□□ 1.78
NOD1-204ENST00000419601 ATP10BO94823 1461 aa26.18■■□□□ 1.78
NOD1-204ENST00000419601 ARID3CA6NKF2 412 aa26.15■■□□□ 1.78
NOD1-204ENST00000419601 KCNH8Q96L42 1107 aa26.13■■□□□ 1.77
NOD1-204ENST00000419601 TEX14Q8IWB6 1497 aa26.12■■□□□ 1.77
NOD1-204ENST00000419601 NUP153P49790 1475 aaKnown RBP26.11■■□□□ 1.77
NOD1-204ENST00000419601 CFAP43Q8NDM7 1665 aa26.1■■□□□ 1.77
NOD1-204ENST00000419601 CD109Q6YHK3 1445 aa26.06■■□□□ 1.76
NOD1-204ENST00000419601 ARHGAP35Q9NRY4 1499 aa26.05■■□□□ 1.76
NOD1-204ENST00000419601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.05■■□□□ 1.76
NOD1-204ENST00000419601 HNRNPUL2Q1KMD3 747 aaKnown RBP26.05■■□□□ 1.76
NOD1-204ENST00000419601 KDM4FA0A1W2PPD8 638 aa26.04■■□□□ 1.76
NOD1-204ENST00000419601 MAGI3Q5TCQ9 1506 aa26.04■■□□□ 1.76
NOD1-204ENST00000419601 FMN1Q68DA7 1419 aa26.01■■□□□ 1.75
NOD1-204ENST00000419601 ABCA9Q8IUA7 1624 aa25.98■■□□□ 1.75
NOD1-204ENST00000419601 COL17A1Q9UMD9 1497 aaPredicted RBP25.97■■□□□ 1.75
NOD1-204ENST00000419601 PLEKHD1A6NEE1 506 aa25.94■■□□□ 1.74
NOD1-204ENST00000419601 HECW1Q76N89 1606 aa25.92■■□□□ 1.74
NOD1-204ENST00000419601 CDK13Q14004 1512 aaKnown RBP25.89■■□□□ 1.74
NOD1-204ENST00000419601 ATP1B4Q9UN42 357 aaPredicted RBP25.87■■□□□ 1.73
NOD1-204ENST00000419601 PHLDB1Q86UU1 1377 aa25.83■■□□□ 1.73
NOD1-204ENST00000419601 ADGRL1O94910 1474 aa25.83■■□□□ 1.73
NOD1-204ENST00000419601 ARAP3Q8WWN8 1544 aa25.83■■□□□ 1.72
NOD1-204ENST00000419601 CLIP1P30622 1438 aa25.81■■□□□ 1.72
NOD1-204ENST00000419601 NEO1Q92859 1461 aa25.8■■□□□ 1.72
NOD1-204ENST00000419601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.79■■□□□ 1.72
NOD1-204ENST00000419601 CDK11AQ9UQ88 783 aaPredicted RBP25.79■■□□□ 1.72
NOD1-204ENST00000419601 CASKIN1Q8WXD9 1431 aa25.77■■□□□ 1.72
NOD1-204ENST00000419601 PCF11O94913 1555 aaKnown RBP25.76■■□□□ 1.71
NOD1-204ENST00000419601 TTC37Q6PGP7 1564 aa25.76■■□□□ 1.71
NOD1-204ENST00000419601 LRRIQ1Q96JM4 1722 aa25.74■■□□□ 1.71
NOD1-204ENST00000419601 CFAP74Q9C0B2 1584 aa25.71■■□□□ 1.71
NOD1-204ENST00000419601 CCDC18Q5T9S5 1454 aa25.71■■□□□ 1.71
NOD1-204ENST00000419601 FYCO1Q9BQS8 1478 aa25.7■■□□□ 1.7
NOD1-204ENST00000419601 FANCAO15360 1455 aa25.69■■□□□ 1.7
NOD1-204ENST00000419601 ILDR1Q86SU0 546 aaPredicted RBP25.69■■□□□ 1.7
NOD1-204ENST00000419601 TROQ12816 1431 aaPredicted RBP25.69■■□□□ 1.7
NOD1-204ENST00000419601 KIF14Q15058 1648 aa25.67■■□□□ 1.7
NOD1-204ENST00000419601 AKNAQ7Z591 1439 aa25.65■■□□□ 1.7
NOD1-204ENST00000419601 PLCH2O75038 1416 aa25.64■■□□□ 1.7
NOD1-204ENST00000419601 RAPGEF3O95398 923 aa25.64■■□□□ 1.7
NOD1-204ENST00000419601 HECW2Q9P2P5 1572 aa25.64■■□□□ 1.69
NOD1-204ENST00000419601 MYO5CQ9NQX4 1742 aa25.62■■□□□ 1.69
NOD1-204ENST00000419601 CEP162Q5TB80 1403 aa25.62■■□□□ 1.69
NOD1-204ENST00000419601 FRMPD1Q5SYB0 1578 aa25.61■■□□□ 1.69
NOD1-204ENST00000419601 DENND4BO75064 1496 aaPredicted RBP25.61■■□□□ 1.69
NOD1-204ENST00000419601 RICTORQ6R327 1708 aa25.57■■□□□ 1.68
NOD1-204ENST00000419601 EFCAB2Q5VUJ9 269 aa25.55■■□□□ 1.68
NOD1-204ENST00000419601 SCAPERQ9BY12 1400 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms