RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
HMGN1P4-201ENST00000419500 CARMIL1Q5VZK9 1371 aa21.67■■□□□ 1.06
HMGN1P4-201ENST00000419500 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
HMGN1P4-201ENST00000419500 KIAA0586Q9BVV6 1533 aa21.61■■□□□ 1.05
HMGN1P4-201ENST00000419500 JPH4Q96JJ6 628 aa21.61■■□□□ 1.05
HMGN1P4-201ENST00000419500 RAPGEF2Q9Y4G8 1499 aa21.55■■□□□ 1.04
HMGN1P4-201ENST00000419500 TRHP20396 242 aaPredicted RBP21.51■■□□□ 1.03
HMGN1P4-201ENST00000419500 IQGAP2Q13576 1575 aa21.51■■□□□ 1.03
HMGN1P4-201ENST00000419500 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
HMGN1P4-201ENST00000419500 CARMIL2Q6F5E8 1435 aa21.43■■□□□ 1.02
HMGN1P4-201ENST00000419500 CTTNBP2Q8WZ74 1663 aa21.4■■□□□ 1.02
HMGN1P4-201ENST00000419500 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
HMGN1P4-201ENST00000419500 EEA1Q15075 1411 aa21.37■■□□□ 1.01
HMGN1P4-201ENST00000419500 UGGT2Q9NYU1 1516 aa21.34■■□□□ 1.01
HMGN1P4-201ENST00000419500 ADCY10Q96PN6 1610 aa21.34■■□□□ 1.01
HMGN1P4-201ENST00000419500 PTPRGP23470 1445 aa21.34■■□□□ 1.01
HMGN1P4-201ENST00000419500 TNIKQ9UKE5 1360 aa21.34■■□□□ 1.01
HMGN1P4-201ENST00000419500 TTBK1Q5TCY1 1321 aaPredicted RBP21.32■■□□□ 1
HMGN1P4-201ENST00000419500 CSRNP3Q8WYN3 585 aa21.32■■□□□ 1
HMGN1P4-201ENST00000419500 DISP1Q96F81 1524 aa21.32■■□□□ 1
HMGN1P4-201ENST00000419500 KIAA0556O60303 1618 aa21.3■■□□□ 1
HMGN1P4-201ENST00000419500 NPM1P06748 294 aaKnown RBP eCLIP21.3■■□□□ 1
HMGN1P4-201ENST00000419500 GOLGA3Q08378 1498 aa21.25■□□□□ 0.99
HMGN1P4-201ENST00000419500 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
HMGN1P4-201ENST00000419500 FAM9AQ8IZU1 332 aaPredicted RBP21.24■□□□□ 0.99
HMGN1P4-201ENST00000419500 UACAQ9BZF9 1416 aa21.2■□□□□ 0.98
HMGN1P4-201ENST00000419500 ABCC2Q92887 1545 aa21.19■□□□□ 0.98
HMGN1P4-201ENST00000419500 KIF13AQ9H1H9 1805 aa21.18■□□□□ 0.98
HMGN1P4-201ENST00000419500 UHRF1BP1LA0JNW5 1464 aa21.18■□□□□ 0.98
HMGN1P4-201ENST00000419500 KIF21BO75037 1637 aa21.17■□□□□ 0.98
HMGN1P4-201ENST00000419500 ABCC10Q5T3U5 1492 aa21.15■□□□□ 0.98
HMGN1P4-201ENST00000419500 DIP2BQ9P265 1576 aa21.14■□□□□ 0.98
HMGN1P4-201ENST00000419500 FAM69CQ0P6D2 419 aa21.1■□□□□ 0.97
HMGN1P4-201ENST00000419500 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
HMGN1P4-201ENST00000419500 SAMD9Q5K651 1589 aa21.09■□□□□ 0.97
HMGN1P4-201ENST00000419500 PLB1Q6P1J6 1458 aa21.08■□□□□ 0.97
HMGN1P4-201ENST00000419500 KDM5BQ9UGL1 1544 aa21.08■□□□□ 0.96
HMGN1P4-201ENST00000419500 ZCCHC11Q5TAX3 1644 aaKnown RBP21.07■□□□□ 0.96
HMGN1P4-201ENST00000419500 ASXL2Q76L83 1435 aa21.07■□□□□ 0.96
HMGN1P4-201ENST00000419500 ABCA8O94911 1581 aa21.05■□□□□ 0.96
HMGN1P4-201ENST00000419500 P3H3Q8IVL6 736 aa21.04■□□□□ 0.96
HMGN1P4-201ENST00000419500 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.96
HMGN1P4-201ENST00000419500 EHMT2Q96KQ7 1210 aa21■□□□□ 0.95
HMGN1P4-201ENST00000419500 EFCAB5A4FU69 1503 aa20.98■□□□□ 0.95
HMGN1P4-201ENST00000419500 UBTFP17480 764 aaKnown RBP20.97■□□□□ 0.95
HMGN1P4-201ENST00000419500 GLI2P10070 1586 aa20.96■□□□□ 0.95
HMGN1P4-201ENST00000419500 TSPOAP1O95153 1857 aa20.96■□□□□ 0.95
HMGN1P4-201ENST00000419500 WDR7Q9Y4E6 1490 aa20.95■□□□□ 0.94
HMGN1P4-201ENST00000419500 FHOD3Q2V2M9 1422 aa20.95■□□□□ 0.94
HMGN1P4-201ENST00000419500 EPRSP07814 1512 aaKnown RBP20.94■□□□□ 0.94
HMGN1P4-201ENST00000419500 RAPGEF6Q8TEU7 1601 aa20.93■□□□□ 0.94
HMGN1P4-201ENST00000419500 MAP3K4Q9Y6R4 1608 aa20.88■□□□□ 0.93
HMGN1P4-201ENST00000419500 KDM6BO15054 1643 aa20.87■□□□□ 0.93
HMGN1P4-201ENST00000419500 ARID3CA6NKF2 412 aa20.87■□□□□ 0.93
HMGN1P4-201ENST00000419500 ATP10BO94823 1461 aa20.85■□□□□ 0.93
HMGN1P4-201ENST00000419500 PPRC1Q5VV67 1664 aaKnown RBP20.85■□□□□ 0.93
HMGN1P4-201ENST00000419500 NUP153P49790 1475 aaKnown RBP20.82■□□□□ 0.92
HMGN1P4-201ENST00000419500 TEX14Q8IWB6 1497 aa20.82■□□□□ 0.92
HMGN1P4-201ENST00000419500 CFAP43Q8NDM7 1665 aa20.81■□□□□ 0.92
HMGN1P4-201ENST00000419500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.81■□□□□ 0.92
HMGN1P4-201ENST00000419500 HNRNPUL2Q1KMD3 747 aaKnown RBP20.81■□□□□ 0.92
HMGN1P4-201ENST00000419500 KCNH8Q96L42 1107 aa20.81■□□□□ 0.92
HMGN1P4-201ENST00000419500 ARHGAP35Q9NRY4 1499 aa20.8■□□□□ 0.92
HMGN1P4-201ENST00000419500 FMN1Q68DA7 1419 aa20.78■□□□□ 0.92
HMGN1P4-201ENST00000419500 CD109Q6YHK3 1445 aa20.76■□□□□ 0.91
HMGN1P4-201ENST00000419500 HECW1Q76N89 1606 aa20.73■□□□□ 0.91
HMGN1P4-201ENST00000419500 MAGI3Q5TCQ9 1506 aa20.73■□□□□ 0.91
HMGN1P4-201ENST00000419500 ABCA9Q8IUA7 1624 aa20.71■□□□□ 0.91
HMGN1P4-201ENST00000419500 CDK13Q14004 1512 aaKnown RBP20.68■□□□□ 0.9
HMGN1P4-201ENST00000419500 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
HMGN1P4-201ENST00000419500 PLEKHD1A6NEE1 506 aa20.67■□□□□ 0.9
HMGN1P4-201ENST00000419500 COL17A1Q9UMD9 1497 aaPredicted RBP20.63■□□□□ 0.89
HMGN1P4-201ENST00000419500 CLIP1P30622 1438 aa20.63■□□□□ 0.89
HMGN1P4-201ENST00000419500 PCF11O94913 1555 aaKnown RBP20.61■□□□□ 0.89
HMGN1P4-201ENST00000419500 CDK11AQ9UQ88 783 aaPredicted RBP20.57■□□□□ 0.88
HMGN1P4-201ENST00000419500 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.57■□□□□ 0.88
HMGN1P4-201ENST00000419500 TTC37Q6PGP7 1564 aa20.56■□□□□ 0.88
HMGN1P4-201ENST00000419500 CASKIN1Q8WXD9 1431 aa20.56■□□□□ 0.88
HMGN1P4-201ENST00000419500 NEO1Q92859 1461 aa20.56■□□□□ 0.88
HMGN1P4-201ENST00000419500 PHLDB1Q86UU1 1377 aa20.55■□□□□ 0.88
HMGN1P4-201ENST00000419500 LRRIQ1Q96JM4 1722 aa20.55■□□□□ 0.88
HMGN1P4-201ENST00000419500 CCDC18Q5T9S5 1454 aa20.55■□□□□ 0.88
HMGN1P4-201ENST00000419500 FYCO1Q9BQS8 1478 aa20.55■□□□□ 0.88
HMGN1P4-201ENST00000419500 ARAP3Q8WWN8 1544 aa20.54■□□□□ 0.88
HMGN1P4-201ENST00000419500 CFAP74Q9C0B2 1584 aa20.53■□□□□ 0.88
HMGN1P4-201ENST00000419500 KIF14Q15058 1648 aa20.52■□□□□ 0.88
HMGN1P4-201ENST00000419500 TROQ12816 1431 aaPredicted RBP20.5■□□□□ 0.87
HMGN1P4-201ENST00000419500 CEP162Q5TB80 1403 aa20.5■□□□□ 0.87
HMGN1P4-201ENST00000419500 FANCAO15360 1455 aa20.5■□□□□ 0.87
HMGN1P4-201ENST00000419500 MYO5CQ9NQX4 1742 aa20.46■□□□□ 0.87
HMGN1P4-201ENST00000419500 AKNAQ7Z591 1439 aa20.44■□□□□ 0.86
HMGN1P4-201ENST00000419500 PLCH2O75038 1416 aa20.43■□□□□ 0.86
HMGN1P4-201ENST00000419500 FRMPD1Q5SYB0 1578 aa20.42■□□□□ 0.86
HMGN1P4-201ENST00000419500 DENND4BO75064 1496 aaPredicted RBP20.41■□□□□ 0.86
HMGN1P4-201ENST00000419500 ADGRL1O94910 1474 aa20.4■□□□□ 0.86
HMGN1P4-201ENST00000419500 RAPGEF3O95398 923 aa20.4■□□□□ 0.86
HMGN1P4-201ENST00000419500 KDM4FA0A1W2PPD8 638 aa20.39■□□□□ 0.85
HMGN1P4-201ENST00000419500 ARHGAP5Q13017 1502 aa20.38■□□□□ 0.85
HMGN1P4-201ENST00000419500 LOC105371045A0A1W2PR82 267 aa20.38■□□□□ 0.85
HMGN1P4-201ENST00000419500 RICTORQ6R327 1708 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms