RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
HLA-DMB-258ENST00000418107 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
HLA-DMB-258ENST00000418107 FAM69CQ0P6D2 419 aa22.08■■□□□ 1.12
HLA-DMB-258ENST00000418107 NPM1P06748 294 aaKnown RBP eCLIP22.07■■□□□ 1.12
HLA-DMB-258ENST00000418107 ABCC10Q5T3U5 1492 aa22.07■■□□□ 1.12
HLA-DMB-258ENST00000418107 MAPKBP1O60336 1514 aa22.04■■□□□ 1.12
HLA-DMB-258ENST00000418107 ADCY10Q96PN6 1610 aa22.04■■□□□ 1.12
HLA-DMB-258ENST00000418107 IGF1RP08069 1367 aa22.02■■□□□ 1.12
HLA-DMB-258ENST00000418107 KIAA0586Q9BVV6 1533 aa22.02■■□□□ 1.12
HLA-DMB-258ENST00000418107 DIP2BQ9P265 1576 aa22.01■■□□□ 1.11
HLA-DMB-258ENST00000418107 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
HLA-DMB-258ENST00000418107 CUL7Q14999 1698 aa21.96■■□□□ 1.11
HLA-DMB-258ENST00000418107 KDM6BO15054 1643 aa21.88■■□□□ 1.09
HLA-DMB-258ENST00000418107 TTBK1Q5TCY1 1321 aaPredicted RBP21.88■■□□□ 1.09
HLA-DMB-258ENST00000418107 PTPRGP23470 1445 aa21.88■■□□□ 1.09
HLA-DMB-258ENST00000418107 CARMIL1Q5VZK9 1371 aa21.86■■□□□ 1.09
HLA-DMB-258ENST00000418107 TSPOAP1O95153 1857 aa21.85■■□□□ 1.09
HLA-DMB-258ENST00000418107 TNIKQ9UKE5 1360 aa21.81■■□□□ 1.08
HLA-DMB-258ENST00000418107 CARMIL2Q6F5E8 1435 aa21.8■■□□□ 1.08
HLA-DMB-258ENST00000418107 KDM4FA0A1W2PPD8 638 aa21.8■■□□□ 1.08
HLA-DMB-258ENST00000418107 ABCC2Q92887 1545 aa21.79■■□□□ 1.08
HLA-DMB-258ENST00000418107 IQGAP2Q13576 1575 aa21.77■■□□□ 1.08
HLA-DMB-258ENST00000418107 ASXL2Q76L83 1435 aa21.75■■□□□ 1.07
HLA-DMB-258ENST00000418107 PLB1Q6P1J6 1458 aa21.72■■□□□ 1.07
HLA-DMB-258ENST00000418107 UHRF1BP1LA0JNW5 1464 aa21.71■■□□□ 1.07
HLA-DMB-258ENST00000418107 DISP1Q96F81 1524 aa21.7■■□□□ 1.06
HLA-DMB-258ENST00000418107 UACAQ9BZF9 1416 aa21.7■■□□□ 1.06
HLA-DMB-258ENST00000418107 GLI2P10070 1586 aa21.69■■□□□ 1.06
HLA-DMB-258ENST00000418107 PPRC1Q5VV67 1664 aaKnown RBP21.68■■□□□ 1.06
HLA-DMB-258ENST00000418107 RAPGEF2Q9Y4G8 1499 aa21.63■■□□□ 1.05
HLA-DMB-258ENST00000418107 UGGT2Q9NYU1 1516 aa21.62■■□□□ 1.05
HLA-DMB-258ENST00000418107 KDM5BQ9UGL1 1544 aa21.62■■□□□ 1.05
HLA-DMB-258ENST00000418107 EPRSP07814 1512 aaKnown RBP21.61■■□□□ 1.05
HLA-DMB-258ENST00000418107 KIAA0556O60303 1618 aa21.59■■□□□ 1.05
HLA-DMB-258ENST00000418107 COL17A1Q9UMD9 1497 aaPredicted RBP21.59■■□□□ 1.05
HLA-DMB-258ENST00000418107 ZCCHC11Q5TAX3 1644 aaKnown RBP21.57■■□□□ 1.04
HLA-DMB-258ENST00000418107 MAP3K4Q9Y6R4 1608 aa21.57■■□□□ 1.04
HLA-DMB-258ENST00000418107 ADGRL1O94910 1474 aa21.56■■□□□ 1.04
HLA-DMB-258ENST00000418107 TEX14Q8IWB6 1497 aa21.53■■□□□ 1.04
HLA-DMB-258ENST00000418107 FAM9AQ8IZU1 332 aaPredicted RBP21.52■■□□□ 1.04
HLA-DMB-258ENST00000418107 WDR7Q9Y4E6 1490 aa21.49■■□□□ 1.03
HLA-DMB-258ENST00000418107 CTTNBP2Q8WZ74 1663 aa21.44■■□□□ 1.02
HLA-DMB-258ENST00000418107 GOLGA3Q08378 1498 aa21.42■■□□□ 1.02
HLA-DMB-258ENST00000418107 ILDR1Q86SU0 546 aaPredicted RBP21.4■■□□□ 1.02
HLA-DMB-258ENST00000418107 ABCA8O94911 1581 aa21.4■■□□□ 1.02
HLA-DMB-258ENST00000418107 KCNH8Q96L42 1107 aa21.39■■□□□ 1.02
HLA-DMB-258ENST00000418107 CD109Q6YHK3 1445 aa21.39■■□□□ 1.01
HLA-DMB-258ENST00000418107 MAGI3Q5TCQ9 1506 aa21.37■■□□□ 1.01
HLA-DMB-258ENST00000418107 CFAP43Q8NDM7 1665 aa21.35■■□□□ 1.01
HLA-DMB-258ENST00000418107 HECW2Q9P2P5 1572 aa21.35■■□□□ 1.01
HLA-DMB-258ENST00000418107 PRXQ9BXM0 1461 aa21.35■■□□□ 1.01
HLA-DMB-258ENST00000418107 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
HLA-DMB-258ENST00000418107 ARID3CA6NKF2 412 aa21.3■■□□□ 1
HLA-DMB-258ENST00000418107 EEA1Q15075 1411 aa21.3■■□□□ 1
HLA-DMB-258ENST00000418107 P3H3Q8IVL6 736 aa21.26■□□□□ 0.99
HLA-DMB-258ENST00000418107 EHMT2Q96KQ7 1210 aa21.25■□□□□ 0.99
HLA-DMB-258ENST00000418107 ATP10BO94823 1461 aa21.23■□□□□ 0.99
HLA-DMB-258ENST00000418107 KIF21BO75037 1637 aa21.23■□□□□ 0.99
HLA-DMB-258ENST00000418107 CSRNP3Q8WYN3 585 aa21.22■□□□□ 0.99
HLA-DMB-258ENST00000418107 ARAP3Q8WWN8 1544 aa21.21■□□□□ 0.99
HLA-DMB-258ENST00000418107 ABCA9Q8IUA7 1624 aa21.16■□□□□ 0.98
HLA-DMB-258ENST00000418107 SAMD9Q5K651 1589 aa21.14■□□□□ 0.97
HLA-DMB-258ENST00000418107 PHLDB1Q86UU1 1377 aa21.12■□□□□ 0.97
HLA-DMB-258ENST00000418107 RAPGEF3O95398 923 aa21.11■□□□□ 0.97
HLA-DMB-258ENST00000418107 RAPGEF6Q8TEU7 1601 aa21.11■□□□□ 0.97
HLA-DMB-258ENST00000418107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.1■□□□□ 0.97
HLA-DMB-258ENST00000418107 HNRNPUL2Q1KMD3 747 aaKnown RBP21.1■□□□□ 0.97
HLA-DMB-258ENST00000418107 NEO1Q92859 1461 aa21.08■□□□□ 0.97
HLA-DMB-258ENST00000418107 RANGAP1P46060 587 aaPredicted RBP21.06■□□□□ 0.96
HLA-DMB-258ENST00000418107 PTPRMP28827 1452 aa21.06■□□□□ 0.96
HLA-DMB-258ENST00000418107 NUP153P49790 1475 aaKnown RBP21.06■□□□□ 0.96
HLA-DMB-258ENST00000418107 ADAMTSL3P82987 1691 aa21.06■□□□□ 0.96
HLA-DMB-258ENST00000418107 FRMPD1Q5SYB0 1578 aa21.04■□□□□ 0.96
HLA-DMB-258ENST00000418107 UBTFP17480 764 aaKnown RBP21.03■□□□□ 0.96
HLA-DMB-258ENST00000418107 FHOD3Q2V2M9 1422 aa21.02■□□□□ 0.96
HLA-DMB-258ENST00000418107 ARID4BQ4LE39 1312 aaPredicted RBP21■□□□□ 0.95
HLA-DMB-258ENST00000418107 BCORL1Q5H9F3 1711 aa20.98■□□□□ 0.95
HLA-DMB-258ENST00000418107 MADDQ8WXG6 1647 aa20.97■□□□□ 0.95
HLA-DMB-258ENST00000418107 PLEKHD1A6NEE1 506 aa20.96■□□□□ 0.95
HLA-DMB-258ENST00000418107 DENND4BO75064 1496 aaPredicted RBP20.94■□□□□ 0.94
HLA-DMB-258ENST00000418107 ARHGEF40Q8TER5 1519 aa20.94■□□□□ 0.94
HLA-DMB-258ENST00000418107 FBXO41Q8TF61 875 aa20.93■□□□□ 0.94
HLA-DMB-258ENST00000418107 AKNAQ7Z591 1439 aa20.92■□□□□ 0.94
HLA-DMB-258ENST00000418107 FANCAO15360 1455 aa20.92■□□□□ 0.94
HLA-DMB-258ENST00000418107 PCF11O94913 1555 aaKnown RBP20.91■□□□□ 0.94
HLA-DMB-258ENST00000418107 RICTORQ6R327 1708 aa20.91■□□□□ 0.94
HLA-DMB-258ENST00000418107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.91■□□□□ 0.94
HLA-DMB-258ENST00000418107 LMTK3Q96Q04 1460 aa20.89■□□□□ 0.93
HLA-DMB-258ENST00000418107 TTC37Q6PGP7 1564 aa20.88■□□□□ 0.93
HLA-DMB-258ENST00000418107 RIMS1Q86UR5 1692 aaKnown RBP20.88■□□□□ 0.93
HLA-DMB-258ENST00000418107 CFAP74Q9C0B2 1584 aa20.88■□□□□ 0.93
HLA-DMB-258ENST00000418107 EFCAB5A4FU69 1503 aa20.87■□□□□ 0.93
HLA-DMB-258ENST00000418107 ZMYM4Q5VZL5 1548 aa20.85■□□□□ 0.93
HLA-DMB-258ENST00000418107 YEATS2Q9ULM3 1422 aa20.84■□□□□ 0.93
HLA-DMB-258ENST00000418107 CDK13Q14004 1512 aaKnown RBP20.84■□□□□ 0.93
HLA-DMB-258ENST00000418107 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
HLA-DMB-258ENST00000418107 ZFYVE16Q7Z3T8 1539 aa20.83■□□□□ 0.93
HLA-DMB-258ENST00000418107 POGZQ7Z3K3 1410 aa20.81■□□□□ 0.92
HLA-DMB-258ENST00000418107 SIGLEC1Q9BZZ2 1709 aa20.81■□□□□ 0.92
HLA-DMB-258ENST00000418107 HSPA2P54652 639 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms